Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ9:0576:0557
Extra
PDB:
ATOM 1 O3' A A 575 -8.729 85.810 110.333 1.00 57.40 O
ATOM 2 P G A 576 -9.052 84.469 109.515 1.00 59.39 P
ATOM 3 OP1 G A 576 -10.515 84.239 109.607 1.00 63.44 O
ATOM 4 OP2 G A 576 -8.115 83.400 109.943 1.00 60.24 O
ATOM 5 O5' G A 576 -8.755 84.850 107.994 1.00 60.28 O
ATOM 6 C5' G A 576 -7.444 85.263 107.570 1.00 56.78 C
ATOM 7 C4' G A 576 -7.323 86.767 107.650 1.00 54.42 C
ATOM 8 O4' G A 576 -6.088 87.102 108.331 1.00 53.40 O
ATOM 9 C3' G A 576 -7.303 87.555 106.343 1.00 52.85 C
ATOM 10 O3' G A 576 -7.822 88.860 106.670 1.00 54.27 O
ATOM 11 C2' G A 576 -5.803 87.600 106.049 1.00 51.28 C
ATOM 12 O2' G A 576 -5.415 88.633 105.163 1.00 49.88 O
ATOM 13 C1' G A 576 -5.252 87.831 107.458 1.00 49.86 C
ATOM 14 N9 G A 576 -3.883 87.417 107.735 1.00 45.94 N
ATOM 15 C8 G A 576 -3.202 86.323 107.246 1.00 44.02 C
ATOM 16 N7 G A 576 -2.002 86.207 107.746 1.00 41.91 N
ATOM 17 C5 G A 576 -1.882 87.299 108.601 1.00 41.41 C
ATOM 18 C6 G A 576 -0.807 87.708 109.418 1.00 40.83 C
ATOM 19 O6 G A 576 0.296 87.177 109.554 1.00 39.89 O
ATOM 20 N1 G A 576 -1.112 88.867 110.128 1.00 40.47 N
ATOM 21 C2 G A 576 -2.303 89.543 110.064 1.00 41.01 C
ATOM 22 N2 G A 576 -2.423 90.628 110.859 1.00 39.60 N
ATOM 23 N3 G A 576 -3.309 89.179 109.290 1.00 41.82 N
ATOM 24 C4 G A 576 -3.031 88.054 108.595 1.00 42.39 C
ATOM 25 P U A 577 -8.110 89.954 105.516 1.00 54.94 P
ATOM 26 OP1 U A 577 -8.649 89.289 104.293 1.00 53.23 O
ATOM 27 OP2 U A 577 -6.915 90.835 105.412 1.00 54.84 O
ATOM 28 O5' U A 577 -9.261 90.856 106.146 1.00 54.22 O
TER
ATOM 1 O3' G B 556 0.412 93.561 112.531 1.00 44.03 O
ATOM 2 P A B 557 -0.112 92.348 113.444 1.00 47.33 P
ATOM 3 OP1 A B 557 0.410 92.575 114.816 1.00 47.07 O
ATOM 4 OP2 A B 557 0.141 91.040 112.764 1.00 43.82 O
ATOM 5 O5' A B 557 -1.683 92.585 113.460 1.00 48.32 O
ATOM 6 C5' A B 557 -2.362 92.929 114.674 1.00 47.74 C
ATOM 7 C4' A B 557 -2.239 94.404 114.934 1.00 47.22 C
ATOM 8 O4' A B 557 -2.716 95.152 113.787 1.00 46.44 O
ATOM 9 C3' A B 557 -3.098 94.879 116.081 1.00 48.39 C
ATOM 10 O3' A B 557 -2.486 94.642 117.331 1.00 49.13 O
ATOM 11 C2' A B 557 -3.333 96.341 115.736 1.00 48.01 C
ATOM 12 O2' A B 557 -2.235 97.177 116.042 1.00 48.34 O
ATOM 13 C1' A B 557 -3.522 96.237 114.223 1.00 46.32 C
ATOM 14 N9 A B 557 -4.906 95.916 113.869 1.00 47.32 N
ATOM 15 C8 A B 557 -5.358 94.809 113.179 1.00 47.55 C
ATOM 16 N7 A B 557 -6.657 94.788 113.008 1.00 47.59 N
ATOM 17 C5 A B 557 -7.092 95.954 113.623 1.00 45.92 C
ATOM 18 C6 A B 557 -8.366 96.511 113.776 1.00 46.02 C
ATOM 19 N6 A B 557 -9.472 95.950 113.294 1.00 45.14 N
ATOM 20 N1 A B 557 -8.466 97.685 114.442 1.00 47.90 N
ATOM 21 C2 A B 557 -7.341 98.254 114.912 1.00 47.71 C
ATOM 22 N3 A B 557 -6.080 97.826 114.824 1.00 47.21 N
ATOM 23 C4 A B 557 -6.026 96.657 114.160 1.00 46.20 C
ATOM 24 P C B 558 -3.401 94.223 118.579 1.00 51.64 P
ATOM 25 OP1 C B 558 -2.509 93.662 119.637 1.00 51.37 O
ATOM 26 OP2 C B 558 -4.536 93.398 118.063 1.00 51.04 O
ATOM 27 O5' C B 558 -3.964 95.625 119.080 1.00 49.42 O
TER
ATOM 2 P G A 576 -9.052 84.469 109.515 1.00 59.39 P
ATOM 3 OP1 G A 576 -10.515 84.239 109.607 1.00 63.44 O
ATOM 4 OP2 G A 576 -8.115 83.400 109.943 1.00 60.24 O
ATOM 5 O5' G A 576 -8.755 84.850 107.994 1.00 60.28 O
ATOM 6 C5' G A 576 -7.444 85.263 107.570 1.00 56.78 C
ATOM 7 C4' G A 576 -7.323 86.767 107.650 1.00 54.42 C
ATOM 8 O4' G A 576 -6.088 87.102 108.331 1.00 53.40 O
ATOM 9 C3' G A 576 -7.303 87.555 106.343 1.00 52.85 C
ATOM 10 O3' G A 576 -7.822 88.860 106.670 1.00 54.27 O
ATOM 11 C2' G A 576 -5.803 87.600 106.049 1.00 51.28 C
ATOM 12 O2' G A 576 -5.415 88.633 105.163 1.00 49.88 O
ATOM 13 C1' G A 576 -5.252 87.831 107.458 1.00 49.86 C
ATOM 14 N9 G A 576 -3.883 87.417 107.735 1.00 45.94 N
ATOM 15 C8 G A 576 -3.202 86.323 107.246 1.00 44.02 C
ATOM 16 N7 G A 576 -2.002 86.207 107.746 1.00 41.91 N
ATOM 17 C5 G A 576 -1.882 87.299 108.601 1.00 41.41 C
ATOM 18 C6 G A 576 -0.807 87.708 109.418 1.00 40.83 C
ATOM 19 O6 G A 576 0.296 87.177 109.554 1.00 39.89 O
ATOM 20 N1 G A 576 -1.112 88.867 110.128 1.00 40.47 N
ATOM 21 C2 G A 576 -2.303 89.543 110.064 1.00 41.01 C
ATOM 22 N2 G A 576 -2.423 90.628 110.859 1.00 39.60 N
ATOM 23 N3 G A 576 -3.309 89.179 109.290 1.00 41.82 N
ATOM 24 C4 G A 576 -3.031 88.054 108.595 1.00 42.39 C
ATOM 25 P U A 577 -8.110 89.954 105.516 1.00 54.94 P
ATOM 26 OP1 U A 577 -8.649 89.289 104.293 1.00 53.23 O
ATOM 27 OP2 U A 577 -6.915 90.835 105.412 1.00 54.84 O
ATOM 28 O5' U A 577 -9.261 90.856 106.146 1.00 54.22 O
TER
ATOM 1 O3' G B 556 0.412 93.561 112.531 1.00 44.03 O
ATOM 2 P A B 557 -0.112 92.348 113.444 1.00 47.33 P
ATOM 3 OP1 A B 557 0.410 92.575 114.816 1.00 47.07 O
ATOM 4 OP2 A B 557 0.141 91.040 112.764 1.00 43.82 O
ATOM 5 O5' A B 557 -1.683 92.585 113.460 1.00 48.32 O
ATOM 6 C5' A B 557 -2.362 92.929 114.674 1.00 47.74 C
ATOM 7 C4' A B 557 -2.239 94.404 114.934 1.00 47.22 C
ATOM 8 O4' A B 557 -2.716 95.152 113.787 1.00 46.44 O
ATOM 9 C3' A B 557 -3.098 94.879 116.081 1.00 48.39 C
ATOM 10 O3' A B 557 -2.486 94.642 117.331 1.00 49.13 O
ATOM 11 C2' A B 557 -3.333 96.341 115.736 1.00 48.01 C
ATOM 12 O2' A B 557 -2.235 97.177 116.042 1.00 48.34 O
ATOM 13 C1' A B 557 -3.522 96.237 114.223 1.00 46.32 C
ATOM 14 N9 A B 557 -4.906 95.916 113.869 1.00 47.32 N
ATOM 15 C8 A B 557 -5.358 94.809 113.179 1.00 47.55 C
ATOM 16 N7 A B 557 -6.657 94.788 113.008 1.00 47.59 N
ATOM 17 C5 A B 557 -7.092 95.954 113.623 1.00 45.92 C
ATOM 18 C6 A B 557 -8.366 96.511 113.776 1.00 46.02 C
ATOM 19 N6 A B 557 -9.472 95.950 113.294 1.00 45.14 N
ATOM 20 N1 A B 557 -8.466 97.685 114.442 1.00 47.90 N
ATOM 21 C2 A B 557 -7.341 98.254 114.912 1.00 47.71 C
ATOM 22 N3 A B 557 -6.080 97.826 114.824 1.00 47.21 N
ATOM 23 C4 A B 557 -6.026 96.657 114.160 1.00 46.20 C
ATOM 24 P C B 558 -3.401 94.223 118.579 1.00 51.64 P
ATOM 25 OP1 C B 558 -2.509 93.662 119.637 1.00 51.37 O
ATOM 26 OP2 C B 558 -4.536 93.398 118.063 1.00 51.04 O
ATOM 27 O5' C B 558 -3.964 95.625 119.080 1.00 49.42 O
TER
Atoms:
OP1: (-10.515,84.239,109.607)
OP2: (-8.115,83.400,109.943)
C3': (-7.303,87.555,106.343)
C1': (-5.252,87.831,107.458)
C5': (-7.444,85.263,107.570)
O6: (0.296,87.177,109.554)
O4': (-6.088,87.102,108.331)
C8: (-3.202,86.323,107.246)
C2: (-2.303,89.543,110.064)
C6: (-0.807,87.708,109.418)
C5: (-1.882,87.299,108.601)
C4: (-3.031,88.054,108.595)
P: (-9.052,84.469,109.515)
C4': (-7.323,86.767,107.650)
C2': (-5.803,87.600,106.049)
O2': (-5.415,88.633,105.163)
N1: (-1.112,88.867,110.128)
N2: (-2.423,90.628,110.859)
N3: (-3.309,89.179,109.290)
N7: (-2.002,86.207,107.746)
N9: (-3.883,87.417,107.735)
O5': (-8.755,84.850,107.994)
O3': (-7.822,88.860,106.670)
OP2: (-8.115,83.400,109.943)
C3': (-7.303,87.555,106.343)
C1': (-5.252,87.831,107.458)
C5': (-7.444,85.263,107.570)
O6: (0.296,87.177,109.554)
O4': (-6.088,87.102,108.331)
C8: (-3.202,86.323,107.246)
C2: (-2.303,89.543,110.064)
C6: (-0.807,87.708,109.418)
C5: (-1.882,87.299,108.601)
C4: (-3.031,88.054,108.595)
P: (-9.052,84.469,109.515)
C4': (-7.323,86.767,107.650)
C2': (-5.803,87.600,106.049)
O2': (-5.415,88.633,105.163)
N1: (-1.112,88.867,110.128)
N2: (-2.423,90.628,110.859)
N3: (-3.309,89.179,109.290)
N7: (-2.002,86.207,107.746)
N9: (-3.883,87.417,107.735)
O5': (-8.755,84.850,107.994)
O3': (-7.822,88.860,106.670)
OP1: (0.410,92.575,114.816)
OP2: (0.141,91.040,112.764)
C3': (-3.098,94.879,116.081)
C1': (-3.522,96.237,114.223)
C5': (-2.362,92.929,114.674)
O4': (-2.716,95.152,113.787)
C8: (-5.358,94.809,113.179)
O2': (-2.235,97.177,116.042)
C6: (-8.366,96.511,113.776)
C5: (-7.092,95.954,113.623)
C4: (-6.026,96.657,114.160)
P: (-0.112,92.348,113.444)
C4': (-2.239,94.404,114.934)
C2': (-3.333,96.341,115.736)
C2: (-7.341,98.254,114.912)
N1: (-8.466,97.685,114.442)
N3: (-6.080,97.826,114.824)
N6: (-9.472,95.950,113.294)
N7: (-6.657,94.788,113.008)
N9: (-4.906,95.916,113.869)
O5': (-1.683,92.585,113.460)
O3': (-2.486,94.642,117.331)
OP2: (0.141,91.040,112.764)
C3': (-3.098,94.879,116.081)
C1': (-3.522,96.237,114.223)
C5': (-2.362,92.929,114.674)
O4': (-2.716,95.152,113.787)
C8: (-5.358,94.809,113.179)
O2': (-2.235,97.177,116.042)
C6: (-8.366,96.511,113.776)
C5: (-7.092,95.954,113.623)
C4: (-6.026,96.657,114.160)
P: (-0.112,92.348,113.444)
C4': (-2.239,94.404,114.934)
C2': (-3.333,96.341,115.736)
C2: (-7.341,98.254,114.912)
N1: (-8.466,97.685,114.442)
N3: (-6.080,97.826,114.824)
N6: (-9.472,95.950,113.294)
N7: (-6.657,94.788,113.008)
N9: (-4.906,95.916,113.869)
O5': (-1.683,92.585,113.460)
O3': (-2.486,94.642,117.331)
Image (generated by PyMOL):