Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1731:A1734
Extra
PDB:
ATOM 1 O3' C A1730 60.690 -29.189 -41.326 1.00 45.22 O
ATOM 2 P G A1731 61.694 -29.520 -42.534 1.00 52.13 P
ATOM 3 OP1 G A1731 62.068 -30.967 -42.458 1.00 48.15 O
ATOM 4 OP2 G A1731 62.759 -28.477 -42.582 1.00 52.63 O
ATOM 5 O5' G A1731 60.812 -29.253 -43.828 1.00 53.66 O
ATOM 6 C5' G A1731 59.632 -29.992 -44.049 1.00 57.31 C
ATOM 7 C4' G A1731 59.044 -29.645 -45.385 1.00 53.38 C
ATOM 8 O4' G A1731 58.270 -28.428 -45.289 1.00 50.76 O
ATOM 9 C3' G A1731 60.012 -29.372 -46.516 1.00 51.73 C
ATOM 10 O3' G A1731 60.567 -30.531 -47.115 1.00 50.06 O
ATOM 11 C2' G A1731 59.136 -28.608 -47.487 1.00 51.30 C
ATOM 12 O2' G A1731 58.320 -29.494 -48.228 1.00 53.00 O
ATOM 13 C1' G A1731 58.291 -27.765 -46.534 1.00 47.75 C
ATOM 14 N9 G A1731 58.927 -26.479 -46.332 1.00 47.59 N
ATOM 15 C8 G A1731 59.612 -26.070 -45.218 1.00 52.88 C
ATOM 16 N7 G A1731 60.145 -24.892 -45.357 1.00 57.43 N
ATOM 17 C5 G A1731 59.775 -24.497 -46.632 1.00 60.05 C
ATOM 18 C6 G A1731 60.075 -23.319 -47.343 1.00 62.96 C
ATOM 19 O6 G A1731 60.790 -22.367 -46.992 1.00 64.36 O
ATOM 20 N1 G A1731 59.465 -23.310 -48.592 1.00 60.26 N
ATOM 21 C2 G A1731 58.684 -24.317 -49.096 1.00 61.40 C
ATOM 22 N2 G A1731 58.158 -24.101 -50.312 1.00 60.89 N
ATOM 23 N3 G A1731 58.430 -25.441 -48.453 1.00 56.85 N
ATOM 24 C4 G A1731 58.999 -25.458 -47.234 1.00 53.36 C
ATOM 25 P U A1732 62.030 -30.425 -47.768 1.00 59.41 P
ATOM 26 OP1 U A1732 62.439 -31.698 -48.419 1.00 47.81 O
ATOM 27 OP2 U A1732 62.901 -29.812 -46.731 1.00 48.70 O
ATOM 28 O5' U A1732 61.857 -29.350 -48.923 1.00 47.71 O
TER
ATOM 1 O3' A B1733 58.278 -23.297 -54.229 1.00 53.93 O
ATOM 2 P A B1734 57.563 -22.095 -53.437 1.00 55.50 P
ATOM 3 OP1 A B1734 57.919 -20.796 -54.094 1.00 43.17 O
ATOM 4 OP2 A B1734 57.840 -22.306 -51.990 1.00 50.12 O
ATOM 5 O5' A B1734 56.003 -22.353 -53.618 1.00 52.84 O
ATOM 6 C5' A B1734 55.392 -22.208 -54.887 1.00 56.41 C
ATOM 7 C4' A B1734 54.046 -22.888 -54.895 1.00 60.54 C
ATOM 8 O4' A B1734 54.227 -24.299 -54.580 1.00 56.45 O
ATOM 9 C3' A B1734 53.046 -22.401 -53.857 1.00 56.88 C
ATOM 10 O3' A B1734 52.339 -21.233 -54.246 1.00 53.27 O
ATOM 11 C2' A B1734 52.127 -23.606 -53.704 1.00 55.77 C
ATOM 12 O2' A B1734 51.154 -23.701 -54.717 1.00 55.67 O
ATOM 13 C1' A B1734 53.115 -24.765 -53.835 1.00 58.76 C
ATOM 14 N9 A B1734 53.568 -25.169 -52.503 1.00 60.28 N
ATOM 15 C8 A B1734 54.388 -24.493 -51.616 1.00 58.08 C
ATOM 16 N7 A B1734 54.541 -25.105 -50.468 1.00 54.71 N
ATOM 17 C5 A B1734 53.792 -26.267 -50.610 1.00 55.94 C
ATOM 18 C6 A B1734 53.551 -27.352 -49.749 1.00 52.80 C
ATOM 19 N6 A B1734 54.059 -27.457 -48.515 1.00 57.63 N
ATOM 20 N1 A B1734 52.763 -28.346 -50.203 1.00 48.29 N
ATOM 21 C2 A B1734 52.259 -28.251 -51.440 1.00 49.67 C
ATOM 22 N3 A B1734 52.412 -27.294 -52.343 1.00 50.19 N
ATOM 23 C4 A B1734 53.198 -26.321 -51.862 1.00 55.46 C
ATOM 24 P G B1735 52.112 -20.057 -53.170 1.00 67.38 P
ATOM 25 OP1 G B1735 51.060 -19.146 -53.678 1.00 66.81 O
ATOM 26 OP2 G B1735 53.456 -19.507 -52.838 1.00 73.72 O
ATOM 27 O5' G B1735 51.544 -20.803 -51.873 1.00 64.04 O
TER
ATOM 2 P G A1731 61.694 -29.520 -42.534 1.00 52.13 P
ATOM 3 OP1 G A1731 62.068 -30.967 -42.458 1.00 48.15 O
ATOM 4 OP2 G A1731 62.759 -28.477 -42.582 1.00 52.63 O
ATOM 5 O5' G A1731 60.812 -29.253 -43.828 1.00 53.66 O
ATOM 6 C5' G A1731 59.632 -29.992 -44.049 1.00 57.31 C
ATOM 7 C4' G A1731 59.044 -29.645 -45.385 1.00 53.38 C
ATOM 8 O4' G A1731 58.270 -28.428 -45.289 1.00 50.76 O
ATOM 9 C3' G A1731 60.012 -29.372 -46.516 1.00 51.73 C
ATOM 10 O3' G A1731 60.567 -30.531 -47.115 1.00 50.06 O
ATOM 11 C2' G A1731 59.136 -28.608 -47.487 1.00 51.30 C
ATOM 12 O2' G A1731 58.320 -29.494 -48.228 1.00 53.00 O
ATOM 13 C1' G A1731 58.291 -27.765 -46.534 1.00 47.75 C
ATOM 14 N9 G A1731 58.927 -26.479 -46.332 1.00 47.59 N
ATOM 15 C8 G A1731 59.612 -26.070 -45.218 1.00 52.88 C
ATOM 16 N7 G A1731 60.145 -24.892 -45.357 1.00 57.43 N
ATOM 17 C5 G A1731 59.775 -24.497 -46.632 1.00 60.05 C
ATOM 18 C6 G A1731 60.075 -23.319 -47.343 1.00 62.96 C
ATOM 19 O6 G A1731 60.790 -22.367 -46.992 1.00 64.36 O
ATOM 20 N1 G A1731 59.465 -23.310 -48.592 1.00 60.26 N
ATOM 21 C2 G A1731 58.684 -24.317 -49.096 1.00 61.40 C
ATOM 22 N2 G A1731 58.158 -24.101 -50.312 1.00 60.89 N
ATOM 23 N3 G A1731 58.430 -25.441 -48.453 1.00 56.85 N
ATOM 24 C4 G A1731 58.999 -25.458 -47.234 1.00 53.36 C
ATOM 25 P U A1732 62.030 -30.425 -47.768 1.00 59.41 P
ATOM 26 OP1 U A1732 62.439 -31.698 -48.419 1.00 47.81 O
ATOM 27 OP2 U A1732 62.901 -29.812 -46.731 1.00 48.70 O
ATOM 28 O5' U A1732 61.857 -29.350 -48.923 1.00 47.71 O
TER
ATOM 1 O3' A B1733 58.278 -23.297 -54.229 1.00 53.93 O
ATOM 2 P A B1734 57.563 -22.095 -53.437 1.00 55.50 P
ATOM 3 OP1 A B1734 57.919 -20.796 -54.094 1.00 43.17 O
ATOM 4 OP2 A B1734 57.840 -22.306 -51.990 1.00 50.12 O
ATOM 5 O5' A B1734 56.003 -22.353 -53.618 1.00 52.84 O
ATOM 6 C5' A B1734 55.392 -22.208 -54.887 1.00 56.41 C
ATOM 7 C4' A B1734 54.046 -22.888 -54.895 1.00 60.54 C
ATOM 8 O4' A B1734 54.227 -24.299 -54.580 1.00 56.45 O
ATOM 9 C3' A B1734 53.046 -22.401 -53.857 1.00 56.88 C
ATOM 10 O3' A B1734 52.339 -21.233 -54.246 1.00 53.27 O
ATOM 11 C2' A B1734 52.127 -23.606 -53.704 1.00 55.77 C
ATOM 12 O2' A B1734 51.154 -23.701 -54.717 1.00 55.67 O
ATOM 13 C1' A B1734 53.115 -24.765 -53.835 1.00 58.76 C
ATOM 14 N9 A B1734 53.568 -25.169 -52.503 1.00 60.28 N
ATOM 15 C8 A B1734 54.388 -24.493 -51.616 1.00 58.08 C
ATOM 16 N7 A B1734 54.541 -25.105 -50.468 1.00 54.71 N
ATOM 17 C5 A B1734 53.792 -26.267 -50.610 1.00 55.94 C
ATOM 18 C6 A B1734 53.551 -27.352 -49.749 1.00 52.80 C
ATOM 19 N6 A B1734 54.059 -27.457 -48.515 1.00 57.63 N
ATOM 20 N1 A B1734 52.763 -28.346 -50.203 1.00 48.29 N
ATOM 21 C2 A B1734 52.259 -28.251 -51.440 1.00 49.67 C
ATOM 22 N3 A B1734 52.412 -27.294 -52.343 1.00 50.19 N
ATOM 23 C4 A B1734 53.198 -26.321 -51.862 1.00 55.46 C
ATOM 24 P G B1735 52.112 -20.057 -53.170 1.00 67.38 P
ATOM 25 OP1 G B1735 51.060 -19.146 -53.678 1.00 66.81 O
ATOM 26 OP2 G B1735 53.456 -19.507 -52.838 1.00 73.72 O
ATOM 27 O5' G B1735 51.544 -20.803 -51.873 1.00 64.04 O
TER
Atoms:
OP1: (62.068,-30.967,-42.458)
OP2: (62.759,-28.477,-42.582)
C3': (60.012,-29.372,-46.516)
C1': (58.291,-27.765,-46.534)
C5': (59.632,-29.992,-44.049)
O6: (60.790,-22.367,-46.992)
O4': (58.270,-28.428,-45.289)
C8: (59.612,-26.070,-45.218)
C2: (58.684,-24.317,-49.096)
C6: (60.075,-23.319,-47.343)
C5: (59.775,-24.497,-46.632)
C4: (58.999,-25.458,-47.234)
P: (61.694,-29.520,-42.534)
C4': (59.044,-29.645,-45.385)
C2': (59.136,-28.608,-47.487)
O2': (58.320,-29.494,-48.228)
N1: (59.465,-23.310,-48.592)
N2: (58.158,-24.101,-50.312)
N3: (58.430,-25.441,-48.453)
N7: (60.145,-24.892,-45.357)
N9: (58.927,-26.479,-46.332)
O5': (60.812,-29.253,-43.828)
O3': (60.567,-30.531,-47.115)
OP2: (62.759,-28.477,-42.582)
C3': (60.012,-29.372,-46.516)
C1': (58.291,-27.765,-46.534)
C5': (59.632,-29.992,-44.049)
O6: (60.790,-22.367,-46.992)
O4': (58.270,-28.428,-45.289)
C8: (59.612,-26.070,-45.218)
C2: (58.684,-24.317,-49.096)
C6: (60.075,-23.319,-47.343)
C5: (59.775,-24.497,-46.632)
C4: (58.999,-25.458,-47.234)
P: (61.694,-29.520,-42.534)
C4': (59.044,-29.645,-45.385)
C2': (59.136,-28.608,-47.487)
O2': (58.320,-29.494,-48.228)
N1: (59.465,-23.310,-48.592)
N2: (58.158,-24.101,-50.312)
N3: (58.430,-25.441,-48.453)
N7: (60.145,-24.892,-45.357)
N9: (58.927,-26.479,-46.332)
O5': (60.812,-29.253,-43.828)
O3': (60.567,-30.531,-47.115)
OP1: (57.919,-20.796,-54.094)
OP2: (57.840,-22.306,-51.990)
C3': (53.046,-22.401,-53.857)
C1': (53.115,-24.765,-53.835)
C5': (55.392,-22.208,-54.887)
O4': (54.227,-24.299,-54.580)
C8: (54.388,-24.493,-51.616)
O2': (51.154,-23.701,-54.717)
C6: (53.551,-27.352,-49.749)
C5: (53.792,-26.267,-50.610)
C4: (53.198,-26.321,-51.862)
P: (57.563,-22.095,-53.437)
C4': (54.046,-22.888,-54.895)
C2': (52.127,-23.606,-53.704)
C2: (52.259,-28.251,-51.440)
N1: (52.763,-28.346,-50.203)
N3: (52.412,-27.294,-52.343)
N6: (54.059,-27.457,-48.515)
N7: (54.541,-25.105,-50.468)
N9: (53.568,-25.169,-52.503)
O5': (56.003,-22.353,-53.618)
O3': (52.339,-21.233,-54.246)
OP2: (57.840,-22.306,-51.990)
C3': (53.046,-22.401,-53.857)
C1': (53.115,-24.765,-53.835)
C5': (55.392,-22.208,-54.887)
O4': (54.227,-24.299,-54.580)
C8: (54.388,-24.493,-51.616)
O2': (51.154,-23.701,-54.717)
C6: (53.551,-27.352,-49.749)
C5: (53.792,-26.267,-50.610)
C4: (53.198,-26.321,-51.862)
P: (57.563,-22.095,-53.437)
C4': (54.046,-22.888,-54.895)
C2': (52.127,-23.606,-53.704)
C2: (52.259,-28.251,-51.440)
N1: (52.763,-28.346,-50.203)
N3: (52.412,-27.294,-52.343)
N6: (54.059,-27.457,-48.515)
N7: (54.541,-25.105,-50.468)
N9: (53.568,-25.169,-52.503)
O5': (56.003,-22.353,-53.618)
O3': (52.339,-21.233,-54.246)
Image (generated by PyMOL):