ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNK:A1220:A1928

Extra

PDB:
ATOM 1 O3' A A1219 99.281-115.149 118.066 1.00 58.45 O
ATOM 2 P G A1220 99.096-113.865 117.113 1.00 53.94 P
ATOM 3 OP1 G A1220 98.589-112.754 117.955 1.00 56.80 O
ATOM 4 OP2 G A1220 98.297-114.320 115.942 1.00 47.71 O
ATOM 5 O5' G A1220 100.592-113.519 116.659 1.00 66.23 O
ATOM 6 C5' G A1220 101.396-112.505 117.315 1.00 67.75 C
ATOM 7 C4' G A1220 102.333-113.122 118.356 1.00 69.27 C
ATOM 8 O4' G A1220 102.765-114.467 117.994 1.00 67.54 O
ATOM 9 C3' G A1220 103.618-112.358 118.690 1.00 65.38 C
ATOM 10 O3' G A1220 103.861-112.492 120.082 1.00 67.13 O
ATOM 11 C2' G A1220 104.697-113.207 118.038 1.00 64.47 C
ATOM 12 O2' G A1220 105.949-113.033 118.663 1.00 65.88 O
ATOM 13 C1' G A1220 104.130-114.599 118.312 1.00 65.87 C
ATOM 14 N9 G A1220 104.691-115.754 117.611 1.00 65.63 N
ATOM 15 C8 G A1220 104.937-115.892 116.265 1.00 64.54 C
ATOM 16 N7 G A1220 105.405-117.068 115.947 1.00 57.85 N
ATOM 17 C5 G A1220 105.473-117.748 117.153 1.00 59.41 C
ATOM 18 C6 G A1220 105.887-119.071 117.437 1.00 65.14 C
ATOM 19 O6 G A1220 106.261-119.950 116.648 1.00 72.89 O
ATOM 20 N1 G A1220 105.830-119.347 118.799 1.00 66.81 N
ATOM 21 C2 G A1220 105.425-118.467 119.765 1.00 64.10 C
ATOM 22 N2 G A1220 105.477-118.918 121.025 1.00 61.85 N
ATOM 23 N3 G A1220 105.008-117.236 119.514 1.00 66.02 N
ATOM 24 C4 G A1220 105.059-116.947 118.194 1.00 63.70 C
ATOM 25 P U A1221 104.455-111.269 120.917 1.00 74.72 P
ATOM 26 OP1 U A1221 104.467-110.054 120.042 1.00 70.55 O
ATOM 27 OP2 U A1221 105.704-111.744 121.573 1.00 73.16 O
ATOM 28 O5' U A1221 103.353-111.062 122.037 1.00 60.71 O
TER

ATOM 1 O3' G B1927 107.219-122.578 123.118 1.00 49.25 O
ATOM 2 P A B1928 105.692-122.883 122.761 1.00 43.73 P
ATOM 3 OP1 A B1928 105.556-124.356 122.744 1.00 51.59 O
ATOM 4 OP2 A B1928 105.349-122.094 121.550 1.00 45.42 O
ATOM 5 O5' A B1928 104.926-122.302 124.033 1.00 55.25 O
ATOM 6 C5' A B1928 103.664-122.818 124.441 1.00 62.49 C
ATOM 7 C4' A B1928 103.649-123.050 125.934 1.00 60.01 C
ATOM 8 O4' A B1928 104.097-121.858 126.622 1.00 57.55 O
ATOM 9 C3' A B1928 102.286-123.364 126.532 1.00 58.46 C
ATOM 10 O3' A B1928 102.010-124.761 126.431 1.00 60.49 O
ATOM 11 C2' A B1928 102.466-122.926 127.977 1.00 60.06 C
ATOM 12 O2' A B1928 103.163-123.919 128.699 1.00 66.42 O
ATOM 13 C1' A B1928 103.377-121.707 127.826 1.00 58.09 C
ATOM 14 N9 A B1928 102.649-120.440 127.753 1.00 62.54 N
ATOM 15 C8 A B1928 102.536-119.608 126.664 1.00 61.93 C
ATOM 16 N7 A B1928 101.836-118.525 126.895 1.00 58.29 N
ATOM 17 C5 A B1928 101.459-118.650 128.223 1.00 60.21 C
ATOM 18 C6 A B1928 100.707-117.818 129.065 1.00 62.37 C
ATOM 19 N6 A B1928 100.192-116.652 128.678 1.00 63.14 N
ATOM 20 N1 A B1928 100.504-118.227 130.336 1.00 64.62 N
ATOM 21 C2 A B1928 101.029-119.396 130.723 1.00 64.80 C
ATOM 22 N3 A B1928 101.759-120.269 130.023 1.00 61.55 N
ATOM 23 C4 A B1928 101.943-119.828 128.764 1.00 60.17 C
ATOM 24 P A B1929 100.514-125.271 126.117 1.00 63.22 P
ATOM 25 OP1 A B1929 100.565-126.753 125.991 1.00 57.45 O
ATOM 26 OP2 A B1929 99.933-124.466 125.011 1.00 66.41 O
ATOM 27 O5' A B1929 99.712-124.899 127.444 1.00 63.70 O
TER

Atoms:
OP1: (98.589,-112.754,117.955)
OP2: (98.297,-114.320,115.942)
C3': (103.618,-112.358,118.690)
C1': (104.130,-114.599,118.312)
C5': (101.396,-112.505,117.315)
O6: (106.261,-119.950,116.648)
O4': (102.765,-114.467,117.994)
C8: (104.937,-115.892,116.265)
C2: (105.425,-118.467,119.765)
C6: (105.887,-119.071,117.437)
C5: (105.473,-117.748,117.153)
C4: (105.059,-116.947,118.194)
P: (99.096,-113.865,117.113)
C4': (102.333,-113.122,118.356)
C2': (104.697,-113.207,118.038)
O2': (105.949,-113.033,118.663)
N1: (105.830,-119.347,118.799)
N2: (105.477,-118.918,121.025)
N3: (105.008,-117.236,119.514)
N7: (105.405,-117.068,115.947)
N9: (104.691,-115.754,117.611)
O5': (100.592,-113.519,116.659)
O3': (103.861,-112.492,120.082)
OP1: (105.556,-124.356,122.744)
OP2: (105.349,-122.094,121.550)
C3': (102.286,-123.364,126.532)
C1': (103.377,-121.707,127.826)
C5': (103.664,-122.818,124.441)
O4': (104.097,-121.858,126.622)
C8: (102.536,-119.608,126.664)
O2': (103.163,-123.919,128.699)
C6: (100.707,-117.818,129.065)
C5: (101.459,-118.650,128.223)
C4: (101.943,-119.828,128.764)
P: (105.692,-122.883,122.761)
C4': (103.649,-123.050,125.934)
C2': (102.466,-122.926,127.977)
C2: (101.029,-119.396,130.723)
N1: (100.504,-118.227,130.336)
N3: (101.759,-120.269,130.023)
N6: (100.192,-116.652,128.678)
N7: (101.836,-118.525,126.895)
N9: (102.649,-120.440,127.753)
O5': (104.926,-122.302,124.033)
O3': (102.010,-124.761,126.431)
Image (generated by PyMOL):
PyMOL image
show in jmol