Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1276:A1279
Extra
PDB:
ATOM 1 O3' U A1275 -8.207 -81.991 4.856 1.00 0.01 O
ATOM 2 P G A1276 -8.086 -83.570 4.725 1.00 0.01 P
ATOM 3 OP1 G A1276 -7.191 -84.016 5.795 1.00 0.01 O
ATOM 4 OP2 G A1276 -7.724 -83.869 3.305 1.00 0.01 O
ATOM 5 O5' G A1276 -9.566 -84.056 5.016 1.00 0.01 O
ATOM 6 C5' G A1276 -10.399 -83.375 5.926 1.00 0.01 C
ATOM 7 C4' G A1276 -11.840 -83.469 5.505 1.00 0.01 C
ATOM 8 O4' G A1276 -12.112 -82.524 4.450 1.00 0.01 O
ATOM 9 C3' G A1276 -12.275 -84.784 4.892 1.00 0.01 C
ATOM 10 O3' G A1276 -12.463 -85.782 5.830 1.00 0.01 O
ATOM 11 C2' G A1276 -13.551 -84.400 4.201 1.00 0.01 C
ATOM 12 O2' G A1276 -14.604 -84.254 5.144 1.00 0.01 O
ATOM 13 C1' G A1276 -13.165 -83.029 3.641 1.00 0.01 C
ATOM 14 N9 G A1276 -12.687 -83.163 2.269 1.00 0.01 N
ATOM 15 C8 G A1276 -11.455 -83.615 1.934 1.00 0.01 C
ATOM 16 N7 G A1276 -11.298 -83.727 0.643 1.00 0.01 N
ATOM 17 C5 G A1276 -12.512 -83.351 0.117 1.00 0.01 C
ATOM 18 C6 G A1276 -12.920 -83.283 -1.227 1.00 0.01 C
ATOM 19 O6 G A1276 -12.238 -83.545 -2.228 1.00 0.01 O
ATOM 20 N1 G A1276 -14.234 -82.849 -1.348 1.00 0.01 N
ATOM 21 C2 G A1276 -15.045 -82.525 -0.310 1.00 0.01 C
ATOM 22 N2 G A1276 -16.271 -82.129 -0.659 1.00 0.01 N
ATOM 23 N3 G A1276 -14.673 -82.601 0.964 1.00 0.01 N
ATOM 24 C4 G A1276 -13.395 -83.012 1.107 1.00 0.01 C
ATOM 25 P A A1277 -12.089 -87.280 5.469 1.00 0.01 P
ATOM 26 OP1 A A1277 -12.007 -88.011 6.751 1.00 0.01 O
ATOM 27 OP2 A A1277 -10.907 -87.221 4.585 1.00 0.01 O
ATOM 28 O5' A A1277 -13.349 -87.777 4.653 1.00 0.01 O
TER
ATOM 1 O3' A B1278 -18.531 -84.661 -2.594 1.00 0.01 O
ATOM 2 P A B1279 -17.604 -83.773 -3.532 1.00 0.01 P
ATOM 3 OP1 A B1279 -18.135 -83.883 -4.908 1.00 0.01 O
ATOM 4 OP2 A B1279 -16.200 -84.188 -3.260 1.00 0.01 O
ATOM 5 O5' A B1279 -17.864 -82.311 -2.992 1.00 0.01 O
ATOM 6 C5' A B1279 -19.166 -81.766 -3.035 1.00 0.01 C
ATOM 7 C4' A B1279 -19.159 -80.279 -2.865 1.00 0.01 C
ATOM 8 O4' A B1279 -18.529 -79.947 -1.609 1.00 0.01 O
ATOM 9 C3' A B1279 -18.408 -79.480 -3.937 1.00 0.01 C
ATOM 10 O3' A B1279 -19.262 -78.482 -4.488 1.00 0.01 O
ATOM 11 C2' A B1279 -17.275 -78.808 -3.158 1.00 0.01 C
ATOM 12 O2' A B1279 -16.935 -77.528 -3.615 1.00 0.01 O
ATOM 13 C1' A B1279 -17.855 -78.741 -1.774 1.00 0.01 C
ATOM 14 N9 A B1279 -16.874 -78.571 -0.713 1.00 0.01 N
ATOM 15 C8 A B1279 -15.577 -78.934 -0.703 1.00 0.01 C
ATOM 16 N7 A B1279 -14.950 -78.592 0.378 1.00 0.01 N
ATOM 17 C5 A B1279 -15.888 -77.944 1.109 1.00 0.01 C
ATOM 18 C6 A B1279 -15.813 -77.348 2.364 1.00 0.01 C
ATOM 19 N6 A B1279 -14.674 -77.344 3.061 1.00 0.01 N
ATOM 20 N1 A B1279 -16.928 -76.777 2.867 1.00 0.01 N
ATOM 21 C2 A B1279 -18.019 -76.830 2.100 1.00 0.01 C
ATOM 22 N3 A B1279 -18.194 -77.359 0.896 1.00 0.01 N
ATOM 23 C4 A B1279 -17.071 -77.908 0.451 1.00 0.01 C
ATOM 24 P A B1280 -20.500 -78.899 -5.411 1.00 0.01 P
ATOM 25 OP1 A B1280 -21.554 -79.391 -4.527 1.00 0.01 O
ATOM 26 OP2 A B1280 -19.982 -79.795 -6.479 1.00 0.01 O
ATOM 27 O5' A B1280 -20.935 -77.535 -6.033 1.00 0.01 O
TER
ATOM 2 P G A1276 -8.086 -83.570 4.725 1.00 0.01 P
ATOM 3 OP1 G A1276 -7.191 -84.016 5.795 1.00 0.01 O
ATOM 4 OP2 G A1276 -7.724 -83.869 3.305 1.00 0.01 O
ATOM 5 O5' G A1276 -9.566 -84.056 5.016 1.00 0.01 O
ATOM 6 C5' G A1276 -10.399 -83.375 5.926 1.00 0.01 C
ATOM 7 C4' G A1276 -11.840 -83.469 5.505 1.00 0.01 C
ATOM 8 O4' G A1276 -12.112 -82.524 4.450 1.00 0.01 O
ATOM 9 C3' G A1276 -12.275 -84.784 4.892 1.00 0.01 C
ATOM 10 O3' G A1276 -12.463 -85.782 5.830 1.00 0.01 O
ATOM 11 C2' G A1276 -13.551 -84.400 4.201 1.00 0.01 C
ATOM 12 O2' G A1276 -14.604 -84.254 5.144 1.00 0.01 O
ATOM 13 C1' G A1276 -13.165 -83.029 3.641 1.00 0.01 C
ATOM 14 N9 G A1276 -12.687 -83.163 2.269 1.00 0.01 N
ATOM 15 C8 G A1276 -11.455 -83.615 1.934 1.00 0.01 C
ATOM 16 N7 G A1276 -11.298 -83.727 0.643 1.00 0.01 N
ATOM 17 C5 G A1276 -12.512 -83.351 0.117 1.00 0.01 C
ATOM 18 C6 G A1276 -12.920 -83.283 -1.227 1.00 0.01 C
ATOM 19 O6 G A1276 -12.238 -83.545 -2.228 1.00 0.01 O
ATOM 20 N1 G A1276 -14.234 -82.849 -1.348 1.00 0.01 N
ATOM 21 C2 G A1276 -15.045 -82.525 -0.310 1.00 0.01 C
ATOM 22 N2 G A1276 -16.271 -82.129 -0.659 1.00 0.01 N
ATOM 23 N3 G A1276 -14.673 -82.601 0.964 1.00 0.01 N
ATOM 24 C4 G A1276 -13.395 -83.012 1.107 1.00 0.01 C
ATOM 25 P A A1277 -12.089 -87.280 5.469 1.00 0.01 P
ATOM 26 OP1 A A1277 -12.007 -88.011 6.751 1.00 0.01 O
ATOM 27 OP2 A A1277 -10.907 -87.221 4.585 1.00 0.01 O
ATOM 28 O5' A A1277 -13.349 -87.777 4.653 1.00 0.01 O
TER
ATOM 1 O3' A B1278 -18.531 -84.661 -2.594 1.00 0.01 O
ATOM 2 P A B1279 -17.604 -83.773 -3.532 1.00 0.01 P
ATOM 3 OP1 A B1279 -18.135 -83.883 -4.908 1.00 0.01 O
ATOM 4 OP2 A B1279 -16.200 -84.188 -3.260 1.00 0.01 O
ATOM 5 O5' A B1279 -17.864 -82.311 -2.992 1.00 0.01 O
ATOM 6 C5' A B1279 -19.166 -81.766 -3.035 1.00 0.01 C
ATOM 7 C4' A B1279 -19.159 -80.279 -2.865 1.00 0.01 C
ATOM 8 O4' A B1279 -18.529 -79.947 -1.609 1.00 0.01 O
ATOM 9 C3' A B1279 -18.408 -79.480 -3.937 1.00 0.01 C
ATOM 10 O3' A B1279 -19.262 -78.482 -4.488 1.00 0.01 O
ATOM 11 C2' A B1279 -17.275 -78.808 -3.158 1.00 0.01 C
ATOM 12 O2' A B1279 -16.935 -77.528 -3.615 1.00 0.01 O
ATOM 13 C1' A B1279 -17.855 -78.741 -1.774 1.00 0.01 C
ATOM 14 N9 A B1279 -16.874 -78.571 -0.713 1.00 0.01 N
ATOM 15 C8 A B1279 -15.577 -78.934 -0.703 1.00 0.01 C
ATOM 16 N7 A B1279 -14.950 -78.592 0.378 1.00 0.01 N
ATOM 17 C5 A B1279 -15.888 -77.944 1.109 1.00 0.01 C
ATOM 18 C6 A B1279 -15.813 -77.348 2.364 1.00 0.01 C
ATOM 19 N6 A B1279 -14.674 -77.344 3.061 1.00 0.01 N
ATOM 20 N1 A B1279 -16.928 -76.777 2.867 1.00 0.01 N
ATOM 21 C2 A B1279 -18.019 -76.830 2.100 1.00 0.01 C
ATOM 22 N3 A B1279 -18.194 -77.359 0.896 1.00 0.01 N
ATOM 23 C4 A B1279 -17.071 -77.908 0.451 1.00 0.01 C
ATOM 24 P A B1280 -20.500 -78.899 -5.411 1.00 0.01 P
ATOM 25 OP1 A B1280 -21.554 -79.391 -4.527 1.00 0.01 O
ATOM 26 OP2 A B1280 -19.982 -79.795 -6.479 1.00 0.01 O
ATOM 27 O5' A B1280 -20.935 -77.535 -6.033 1.00 0.01 O
TER
Atoms:
OP1: (-7.191,-84.016,5.795)
OP2: (-7.724,-83.869,3.305)
C3': (-12.275,-84.784,4.892)
C1': (-13.165,-83.029,3.641)
C5': (-10.399,-83.375,5.926)
O6: (-12.238,-83.545,-2.228)
O4': (-12.112,-82.524,4.450)
C8: (-11.455,-83.615,1.934)
C2: (-15.045,-82.525,-0.310)
C6: (-12.920,-83.283,-1.227)
C5: (-12.512,-83.351,0.117)
C4: (-13.395,-83.012,1.107)
P: (-8.086,-83.570,4.725)
C4': (-11.840,-83.469,5.505)
C2': (-13.551,-84.400,4.201)
O2': (-14.604,-84.254,5.144)
N1: (-14.234,-82.849,-1.348)
N2: (-16.271,-82.129,-0.659)
N3: (-14.673,-82.601,0.964)
N7: (-11.298,-83.727,0.643)
N9: (-12.687,-83.163,2.269)
O5': (-9.566,-84.056,5.016)
O3': (-12.463,-85.782,5.830)
OP2: (-7.724,-83.869,3.305)
C3': (-12.275,-84.784,4.892)
C1': (-13.165,-83.029,3.641)
C5': (-10.399,-83.375,5.926)
O6: (-12.238,-83.545,-2.228)
O4': (-12.112,-82.524,4.450)
C8: (-11.455,-83.615,1.934)
C2: (-15.045,-82.525,-0.310)
C6: (-12.920,-83.283,-1.227)
C5: (-12.512,-83.351,0.117)
C4: (-13.395,-83.012,1.107)
P: (-8.086,-83.570,4.725)
C4': (-11.840,-83.469,5.505)
C2': (-13.551,-84.400,4.201)
O2': (-14.604,-84.254,5.144)
N1: (-14.234,-82.849,-1.348)
N2: (-16.271,-82.129,-0.659)
N3: (-14.673,-82.601,0.964)
N7: (-11.298,-83.727,0.643)
N9: (-12.687,-83.163,2.269)
O5': (-9.566,-84.056,5.016)
O3': (-12.463,-85.782,5.830)
OP1: (-18.135,-83.883,-4.908)
OP2: (-16.200,-84.188,-3.260)
C3': (-18.408,-79.480,-3.937)
C1': (-17.855,-78.741,-1.774)
C5': (-19.166,-81.766,-3.035)
O4': (-18.529,-79.947,-1.609)
C8: (-15.577,-78.934,-0.703)
O2': (-16.935,-77.528,-3.615)
C6: (-15.813,-77.348,2.364)
C5: (-15.888,-77.944,1.109)
C4: (-17.071,-77.908,0.451)
P: (-17.604,-83.773,-3.532)
C4': (-19.159,-80.279,-2.865)
C2': (-17.275,-78.808,-3.158)
C2: (-18.019,-76.830,2.100)
N1: (-16.928,-76.777,2.867)
N3: (-18.194,-77.359,0.896)
N6: (-14.674,-77.344,3.061)
N7: (-14.950,-78.592,0.378)
N9: (-16.874,-78.571,-0.713)
O5': (-17.864,-82.311,-2.992)
O3': (-19.262,-78.482,-4.488)
OP2: (-16.200,-84.188,-3.260)
C3': (-18.408,-79.480,-3.937)
C1': (-17.855,-78.741,-1.774)
C5': (-19.166,-81.766,-3.035)
O4': (-18.529,-79.947,-1.609)
C8: (-15.577,-78.934,-0.703)
O2': (-16.935,-77.528,-3.615)
C6: (-15.813,-77.348,2.364)
C5: (-15.888,-77.944,1.109)
C4: (-17.071,-77.908,0.451)
P: (-17.604,-83.773,-3.532)
C4': (-19.159,-80.279,-2.865)
C2': (-17.275,-78.808,-3.158)
C2: (-18.019,-76.830,2.100)
N1: (-16.928,-76.777,2.867)
N3: (-18.194,-77.359,0.896)
N6: (-14.674,-77.344,3.061)
N7: (-14.950,-78.592,0.378)
N9: (-16.874,-78.571,-0.713)
O5': (-17.864,-82.311,-2.992)
O3': (-19.262,-78.482,-4.488)
Image (generated by PyMOL):