Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3GX5:A49:A52
Extra
PDB:
ATOM 1 O3' A A 48 14.728 3.135 -7.855 1.00 74.36 O
ATOM 2 P G A 49 16.154 2.931 -8.569 1.00 92.73 P
ATOM 3 OP1 G A 49 15.950 2.969 -10.033 1.00 93.58 O
ATOM 4 OP2 G A 49 16.849 1.768 -7.981 1.00 91.07 O
ATOM 5 O5' G A 49 16.903 4.274 -8.137 1.00 74.37 O
ATOM 6 C5' G A 49 16.248 5.524 -8.296 1.00 72.38 C
ATOM 7 C4' G A 49 16.988 6.618 -7.548 1.00 77.01 C
ATOM 8 O4' G A 49 16.680 6.541 -6.129 1.00 79.11 O
ATOM 9 C3' G A 49 18.511 6.552 -7.592 1.00 80.23 C
ATOM 10 O3' G A 49 19.037 7.042 -8.823 1.00 83.02 O
ATOM 11 C2' G A 49 18.810 7.500 -6.438 1.00 80.15 C
ATOM 12 O2' G A 49 18.569 8.854 -6.773 1.00 76.88 O
ATOM 13 C1' G A 49 17.813 6.978 -5.397 1.00 79.90 C
ATOM 14 N9 G A 49 18.431 5.858 -4.696 1.00 78.85 N
ATOM 15 C8 G A 49 18.315 4.513 -4.971 1.00 77.69 C
ATOM 16 N7 G A 49 19.026 3.757 -4.179 1.00 75.21 N
ATOM 17 C5 G A 49 19.661 4.661 -3.334 1.00 75.38 C
ATOM 18 C6 G A 49 20.560 4.435 -2.268 1.00 76.90 C
ATOM 19 O6 G A 49 20.987 3.352 -1.847 1.00 77.62 O
ATOM 20 N1 G A 49 20.966 5.630 -1.675 1.00 78.17 N
ATOM 21 C2 G A 49 20.555 6.886 -2.061 1.00 77.66 C
ATOM 22 N2 G A 49 21.055 7.923 -1.370 1.00 76.85 N
ATOM 23 N3 G A 49 19.710 7.109 -3.056 1.00 77.25 N
ATOM 24 C4 G A 49 19.310 5.955 -3.643 1.00 76.80 C
ATOM 25 P A A 50 20.008 6.142 -9.734 1.00 96.57 P
ATOM 26 OP1 A A 50 20.559 7.013 -10.792 1.00100.01 O
ATOM 27 OP2 A A 50 19.311 4.888 -10.096 1.00 94.76 O
ATOM 28 O5' A A 50 21.227 5.792 -8.774 1.00 94.97 O
TER
ATOM 1 O3' A B 51 25.315 8.935 -0.804 1.00105.12 O
ATOM 2 P A B 52 24.490 9.135 0.549 1.00141.49 P
ATOM 3 OP1 A B 52 25.310 8.638 1.678 1.00141.82 O
ATOM 4 OP2 A B 52 23.133 8.583 0.330 1.00139.53 O
ATOM 5 O5' A B 52 24.411 10.730 0.655 1.00104.97 O
ATOM 6 C5' A B 52 23.611 11.311 1.662 1.00106.29 C
ATOM 7 C4' A B 52 23.509 12.811 1.482 1.00109.55 C
ATOM 8 O4' A B 52 23.722 13.159 0.092 1.00110.36 O
ATOM 9 C3' A B 52 22.148 13.380 1.864 1.00110.72 C
ATOM 10 O3' A B 52 22.204 13.897 3.184 1.00112.58 O
ATOM 11 C2' A B 52 21.915 14.465 0.820 1.00111.47 C
ATOM 12 O2' A B 52 22.541 15.687 1.152 1.00113.02 O
ATOM 13 C1' A B 52 22.574 13.818 -0.391 1.00111.23 C
ATOM 14 N9 A B 52 21.725 12.797 -0.975 1.00109.78 N
ATOM 15 C8 A B 52 21.931 11.448 -0.958 1.00108.80 C
ATOM 16 N7 A B 52 20.987 10.767 -1.560 1.00108.04 N
ATOM 17 C5 A B 52 20.102 11.741 -1.995 1.00108.42 C
ATOM 18 C6 A B 52 18.886 11.675 -2.706 1.00107.59 C
ATOM 19 N6 A B 52 18.332 10.528 -3.119 1.00105.75 N
ATOM 20 N1 A B 52 18.260 12.840 -2.978 1.00109.25 N
ATOM 21 C2 A B 52 18.813 13.987 -2.566 1.00110.87 C
ATOM 22 N3 A B 52 19.946 14.173 -1.892 1.00111.69 N
ATOM 23 C4 A B 52 20.544 12.999 -1.639 1.00109.93 C
ATOM 24 P U B 53 22.016 12.890 4.410 1.00105.93 P
ATOM 25 OP1 U B 53 22.091 13.682 5.657 1.00109.21 O
ATOM 26 OP2 U B 53 22.917 11.730 4.225 1.00103.49 O
ATOM 27 O5' U B 53 20.499 12.422 4.189 1.00 90.17 O
TER
ATOM 2 P G A 49 16.154 2.931 -8.569 1.00 92.73 P
ATOM 3 OP1 G A 49 15.950 2.969 -10.033 1.00 93.58 O
ATOM 4 OP2 G A 49 16.849 1.768 -7.981 1.00 91.07 O
ATOM 5 O5' G A 49 16.903 4.274 -8.137 1.00 74.37 O
ATOM 6 C5' G A 49 16.248 5.524 -8.296 1.00 72.38 C
ATOM 7 C4' G A 49 16.988 6.618 -7.548 1.00 77.01 C
ATOM 8 O4' G A 49 16.680 6.541 -6.129 1.00 79.11 O
ATOM 9 C3' G A 49 18.511 6.552 -7.592 1.00 80.23 C
ATOM 10 O3' G A 49 19.037 7.042 -8.823 1.00 83.02 O
ATOM 11 C2' G A 49 18.810 7.500 -6.438 1.00 80.15 C
ATOM 12 O2' G A 49 18.569 8.854 -6.773 1.00 76.88 O
ATOM 13 C1' G A 49 17.813 6.978 -5.397 1.00 79.90 C
ATOM 14 N9 G A 49 18.431 5.858 -4.696 1.00 78.85 N
ATOM 15 C8 G A 49 18.315 4.513 -4.971 1.00 77.69 C
ATOM 16 N7 G A 49 19.026 3.757 -4.179 1.00 75.21 N
ATOM 17 C5 G A 49 19.661 4.661 -3.334 1.00 75.38 C
ATOM 18 C6 G A 49 20.560 4.435 -2.268 1.00 76.90 C
ATOM 19 O6 G A 49 20.987 3.352 -1.847 1.00 77.62 O
ATOM 20 N1 G A 49 20.966 5.630 -1.675 1.00 78.17 N
ATOM 21 C2 G A 49 20.555 6.886 -2.061 1.00 77.66 C
ATOM 22 N2 G A 49 21.055 7.923 -1.370 1.00 76.85 N
ATOM 23 N3 G A 49 19.710 7.109 -3.056 1.00 77.25 N
ATOM 24 C4 G A 49 19.310 5.955 -3.643 1.00 76.80 C
ATOM 25 P A A 50 20.008 6.142 -9.734 1.00 96.57 P
ATOM 26 OP1 A A 50 20.559 7.013 -10.792 1.00100.01 O
ATOM 27 OP2 A A 50 19.311 4.888 -10.096 1.00 94.76 O
ATOM 28 O5' A A 50 21.227 5.792 -8.774 1.00 94.97 O
TER
ATOM 1 O3' A B 51 25.315 8.935 -0.804 1.00105.12 O
ATOM 2 P A B 52 24.490 9.135 0.549 1.00141.49 P
ATOM 3 OP1 A B 52 25.310 8.638 1.678 1.00141.82 O
ATOM 4 OP2 A B 52 23.133 8.583 0.330 1.00139.53 O
ATOM 5 O5' A B 52 24.411 10.730 0.655 1.00104.97 O
ATOM 6 C5' A B 52 23.611 11.311 1.662 1.00106.29 C
ATOM 7 C4' A B 52 23.509 12.811 1.482 1.00109.55 C
ATOM 8 O4' A B 52 23.722 13.159 0.092 1.00110.36 O
ATOM 9 C3' A B 52 22.148 13.380 1.864 1.00110.72 C
ATOM 10 O3' A B 52 22.204 13.897 3.184 1.00112.58 O
ATOM 11 C2' A B 52 21.915 14.465 0.820 1.00111.47 C
ATOM 12 O2' A B 52 22.541 15.687 1.152 1.00113.02 O
ATOM 13 C1' A B 52 22.574 13.818 -0.391 1.00111.23 C
ATOM 14 N9 A B 52 21.725 12.797 -0.975 1.00109.78 N
ATOM 15 C8 A B 52 21.931 11.448 -0.958 1.00108.80 C
ATOM 16 N7 A B 52 20.987 10.767 -1.560 1.00108.04 N
ATOM 17 C5 A B 52 20.102 11.741 -1.995 1.00108.42 C
ATOM 18 C6 A B 52 18.886 11.675 -2.706 1.00107.59 C
ATOM 19 N6 A B 52 18.332 10.528 -3.119 1.00105.75 N
ATOM 20 N1 A B 52 18.260 12.840 -2.978 1.00109.25 N
ATOM 21 C2 A B 52 18.813 13.987 -2.566 1.00110.87 C
ATOM 22 N3 A B 52 19.946 14.173 -1.892 1.00111.69 N
ATOM 23 C4 A B 52 20.544 12.999 -1.639 1.00109.93 C
ATOM 24 P U B 53 22.016 12.890 4.410 1.00105.93 P
ATOM 25 OP1 U B 53 22.091 13.682 5.657 1.00109.21 O
ATOM 26 OP2 U B 53 22.917 11.730 4.225 1.00103.49 O
ATOM 27 O5' U B 53 20.499 12.422 4.189 1.00 90.17 O
TER
Atoms:
OP1: (15.950,2.969,-10.033)
OP2: (16.849,1.768,-7.981)
C3': (18.511,6.552,-7.592)
C1': (17.813,6.978,-5.397)
C5': (16.248,5.524,-8.296)
O6: (20.987,3.352,-1.847)
O4': (16.680,6.541,-6.129)
C8: (18.315,4.513,-4.971)
C2: (20.555,6.886,-2.061)
C6: (20.560,4.435,-2.268)
C5: (19.661,4.661,-3.334)
C4: (19.310,5.955,-3.643)
P: (16.154,2.931,-8.569)
C4': (16.988,6.618,-7.548)
C2': (18.810,7.500,-6.438)
O2': (18.569,8.854,-6.773)
N1: (20.966,5.630,-1.675)
N2: (21.055,7.923,-1.370)
N3: (19.710,7.109,-3.056)
N7: (19.026,3.757,-4.179)
N9: (18.431,5.858,-4.696)
O5': (16.903,4.274,-8.137)
O3': (19.037,7.042,-8.823)
OP2: (16.849,1.768,-7.981)
C3': (18.511,6.552,-7.592)
C1': (17.813,6.978,-5.397)
C5': (16.248,5.524,-8.296)
O6: (20.987,3.352,-1.847)
O4': (16.680,6.541,-6.129)
C8: (18.315,4.513,-4.971)
C2: (20.555,6.886,-2.061)
C6: (20.560,4.435,-2.268)
C5: (19.661,4.661,-3.334)
C4: (19.310,5.955,-3.643)
P: (16.154,2.931,-8.569)
C4': (16.988,6.618,-7.548)
C2': (18.810,7.500,-6.438)
O2': (18.569,8.854,-6.773)
N1: (20.966,5.630,-1.675)
N2: (21.055,7.923,-1.370)
N3: (19.710,7.109,-3.056)
N7: (19.026,3.757,-4.179)
N9: (18.431,5.858,-4.696)
O5': (16.903,4.274,-8.137)
O3': (19.037,7.042,-8.823)
OP1: (25.310,8.638,1.678)
OP2: (23.133,8.583,0.330)
C3': (22.148,13.380,1.864)
C1': (22.574,13.818,-0.391)
C5': (23.611,11.311,1.662)
O4': (23.722,13.159,0.092)
C8: (21.931,11.448,-0.958)
O2': (22.541,15.687,1.152)
C6: (18.886,11.675,-2.706)
C5: (20.102,11.741,-1.995)
C4: (20.544,12.999,-1.639)
P: (24.490,9.135,0.549)
C4': (23.509,12.811,1.482)
C2': (21.915,14.465,0.820)
C2: (18.813,13.987,-2.566)
N1: (18.260,12.840,-2.978)
N3: (19.946,14.173,-1.892)
N6: (18.332,10.528,-3.119)
N7: (20.987,10.767,-1.560)
N9: (21.725,12.797,-0.975)
O5': (24.411,10.730,0.655)
O3': (22.204,13.897,3.184)
OP2: (23.133,8.583,0.330)
C3': (22.148,13.380,1.864)
C1': (22.574,13.818,-0.391)
C5': (23.611,11.311,1.662)
O4': (23.722,13.159,0.092)
C8: (21.931,11.448,-0.958)
O2': (22.541,15.687,1.152)
C6: (18.886,11.675,-2.706)
C5: (20.102,11.741,-1.995)
C4: (20.544,12.999,-1.639)
P: (24.490,9.135,0.549)
C4': (23.509,12.811,1.482)
C2': (21.915,14.465,0.820)
C2: (18.813,13.987,-2.566)
N1: (18.260,12.840,-2.978)
N3: (19.946,14.173,-1.892)
N6: (18.332,10.528,-3.119)
N7: (20.987,10.767,-1.560)
N9: (21.725,12.797,-0.975)
O5': (24.411,10.730,0.655)
O3': (22.204,13.897,3.184)
Image (generated by PyMOL):