Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02716:02719
Extra
PDB:
ATOM 1 O3' G A2715 108.622 201.751 115.424 1.00 80.45 O
ATOM 2 P G A2716 109.339 203.132 115.010 1.00 82.19 P
ATOM 3 OP1 G A2716 110.708 202.791 114.548 1.00 81.67 O
ATOM 4 OP2 G A2716 109.157 204.123 116.104 1.00 83.22 O
ATOM 5 O5' G A2716 108.512 203.643 113.752 1.00 80.52 O
ATOM 6 C5' G A2716 108.686 203.031 112.467 1.00 79.62 C
ATOM 7 C4' G A2716 107.600 203.482 111.531 1.00 79.50 C
ATOM 8 O4' G A2716 106.319 203.070 112.070 1.00 78.25 O
ATOM 9 C3' G A2716 107.459 204.986 111.380 1.00 80.87 C
ATOM 10 O3' G A2716 108.411 205.529 110.467 1.00 84.07 O
ATOM 11 C2' G A2716 106.018 205.118 110.905 1.00 79.39 C
ATOM 12 O2' G A2716 105.833 204.837 109.531 1.00 80.71 O
ATOM 13 C1' G A2716 105.335 204.033 111.739 1.00 77.00 C
ATOM 14 N9 G A2716 104.785 204.583 112.970 1.00 74.30 N
ATOM 15 C8 G A2716 105.240 204.407 114.256 1.00 73.31 C
ATOM 16 N7 G A2716 104.548 205.076 115.136 1.00 73.31 N
ATOM 17 C5 G A2716 103.575 205.726 114.385 1.00 73.25 C
ATOM 18 C6 G A2716 102.539 206.616 114.782 1.00 72.79 C
ATOM 19 O6 G A2716 102.267 207.031 115.915 1.00 73.61 O
ATOM 20 N1 G A2716 101.782 207.036 113.691 1.00 72.02 N
ATOM 21 C2 G A2716 101.997 206.659 112.388 1.00 71.49 C
ATOM 22 N2 G A2716 101.167 207.175 111.471 1.00 71.07 N
ATOM 23 N3 G A2716 102.957 205.841 112.008 1.00 71.74 N
ATOM 24 C4 G A2716 103.702 205.417 113.050 1.00 73.33 C
ATOM 25 P U A2717 109.269 206.827 110.885 1.00 85.24 P
ATOM 26 OP1 U A2717 109.973 207.278 109.652 1.00 84.01 O
ATOM 27 OP2 U A2717 110.056 206.489 112.102 1.00 84.95 O
ATOM 28 O5' U A2717 108.161 207.910 111.277 1.00 86.71 O
TER
ATOM 1 O3' A B2718 99.837 211.012 110.098 1.00 92.20 O
ATOM 2 P A B2719 98.617 210.004 110.396 1.00 91.93 P
ATOM 3 OP1 A B2719 97.404 210.835 110.633 1.00 91.70 O
ATOM 4 OP2 A B2719 99.064 209.045 111.439 1.00 91.81 O
ATOM 5 O5' A B2719 98.418 209.212 109.027 1.00 89.72 O
ATOM 6 C5' A B2719 97.853 209.861 107.872 1.00 87.69 C
ATOM 7 C4' A B2719 97.808 208.904 106.705 1.00 87.20 C
ATOM 8 O4' A B2719 99.161 208.475 106.387 1.00 87.18 O
ATOM 9 C3' A B2719 97.064 207.601 106.948 1.00 86.73 C
ATOM 10 O3' A B2719 95.654 207.740 106.803 1.00 85.44 O
ATOM 11 C2' A B2719 97.678 206.686 105.896 1.00 86.91 C
ATOM 12 O2' A B2719 97.163 206.910 104.597 1.00 86.51 O
ATOM 13 C1' A B2719 99.143 207.123 105.949 1.00 86.78 C
ATOM 14 N9 A B2719 99.927 206.322 106.893 1.00 86.29 N
ATOM 15 C8 A B2719 100.137 206.555 108.231 1.00 85.77 C
ATOM 16 N7 A B2719 100.875 205.644 108.817 1.00 85.99 N
ATOM 17 C5 A B2719 101.176 204.751 107.798 1.00 86.08 C
ATOM 18 C6 A B2719 101.933 203.559 107.771 1.00 86.14 C
ATOM 19 N6 A B2719 102.543 203.041 108.840 1.00 85.26 N
ATOM 20 N1 A B2719 102.041 202.909 106.591 1.00 86.17 N
ATOM 21 C2 A B2719 101.427 203.428 105.517 1.00 86.85 C
ATOM 22 N3 A B2719 100.690 204.536 105.416 1.00 86.71 N
ATOM 23 C4 A B2719 100.602 205.158 106.606 1.00 86.38 C
ATOM 24 P C B2720 94.668 207.054 107.877 1.00 84.52 P
ATOM 25 OP1 C B2720 93.343 206.935 107.221 1.00 84.56 O
ATOM 26 OP2 C B2720 94.780 207.767 109.177 1.00 84.49 O
ATOM 27 O5' C B2720 95.257 205.587 108.070 1.00 82.53 O
TER
ATOM 2 P G A2716 109.339 203.132 115.010 1.00 82.19 P
ATOM 3 OP1 G A2716 110.708 202.791 114.548 1.00 81.67 O
ATOM 4 OP2 G A2716 109.157 204.123 116.104 1.00 83.22 O
ATOM 5 O5' G A2716 108.512 203.643 113.752 1.00 80.52 O
ATOM 6 C5' G A2716 108.686 203.031 112.467 1.00 79.62 C
ATOM 7 C4' G A2716 107.600 203.482 111.531 1.00 79.50 C
ATOM 8 O4' G A2716 106.319 203.070 112.070 1.00 78.25 O
ATOM 9 C3' G A2716 107.459 204.986 111.380 1.00 80.87 C
ATOM 10 O3' G A2716 108.411 205.529 110.467 1.00 84.07 O
ATOM 11 C2' G A2716 106.018 205.118 110.905 1.00 79.39 C
ATOM 12 O2' G A2716 105.833 204.837 109.531 1.00 80.71 O
ATOM 13 C1' G A2716 105.335 204.033 111.739 1.00 77.00 C
ATOM 14 N9 G A2716 104.785 204.583 112.970 1.00 74.30 N
ATOM 15 C8 G A2716 105.240 204.407 114.256 1.00 73.31 C
ATOM 16 N7 G A2716 104.548 205.076 115.136 1.00 73.31 N
ATOM 17 C5 G A2716 103.575 205.726 114.385 1.00 73.25 C
ATOM 18 C6 G A2716 102.539 206.616 114.782 1.00 72.79 C
ATOM 19 O6 G A2716 102.267 207.031 115.915 1.00 73.61 O
ATOM 20 N1 G A2716 101.782 207.036 113.691 1.00 72.02 N
ATOM 21 C2 G A2716 101.997 206.659 112.388 1.00 71.49 C
ATOM 22 N2 G A2716 101.167 207.175 111.471 1.00 71.07 N
ATOM 23 N3 G A2716 102.957 205.841 112.008 1.00 71.74 N
ATOM 24 C4 G A2716 103.702 205.417 113.050 1.00 73.33 C
ATOM 25 P U A2717 109.269 206.827 110.885 1.00 85.24 P
ATOM 26 OP1 U A2717 109.973 207.278 109.652 1.00 84.01 O
ATOM 27 OP2 U A2717 110.056 206.489 112.102 1.00 84.95 O
ATOM 28 O5' U A2717 108.161 207.910 111.277 1.00 86.71 O
TER
ATOM 1 O3' A B2718 99.837 211.012 110.098 1.00 92.20 O
ATOM 2 P A B2719 98.617 210.004 110.396 1.00 91.93 P
ATOM 3 OP1 A B2719 97.404 210.835 110.633 1.00 91.70 O
ATOM 4 OP2 A B2719 99.064 209.045 111.439 1.00 91.81 O
ATOM 5 O5' A B2719 98.418 209.212 109.027 1.00 89.72 O
ATOM 6 C5' A B2719 97.853 209.861 107.872 1.00 87.69 C
ATOM 7 C4' A B2719 97.808 208.904 106.705 1.00 87.20 C
ATOM 8 O4' A B2719 99.161 208.475 106.387 1.00 87.18 O
ATOM 9 C3' A B2719 97.064 207.601 106.948 1.00 86.73 C
ATOM 10 O3' A B2719 95.654 207.740 106.803 1.00 85.44 O
ATOM 11 C2' A B2719 97.678 206.686 105.896 1.00 86.91 C
ATOM 12 O2' A B2719 97.163 206.910 104.597 1.00 86.51 O
ATOM 13 C1' A B2719 99.143 207.123 105.949 1.00 86.78 C
ATOM 14 N9 A B2719 99.927 206.322 106.893 1.00 86.29 N
ATOM 15 C8 A B2719 100.137 206.555 108.231 1.00 85.77 C
ATOM 16 N7 A B2719 100.875 205.644 108.817 1.00 85.99 N
ATOM 17 C5 A B2719 101.176 204.751 107.798 1.00 86.08 C
ATOM 18 C6 A B2719 101.933 203.559 107.771 1.00 86.14 C
ATOM 19 N6 A B2719 102.543 203.041 108.840 1.00 85.26 N
ATOM 20 N1 A B2719 102.041 202.909 106.591 1.00 86.17 N
ATOM 21 C2 A B2719 101.427 203.428 105.517 1.00 86.85 C
ATOM 22 N3 A B2719 100.690 204.536 105.416 1.00 86.71 N
ATOM 23 C4 A B2719 100.602 205.158 106.606 1.00 86.38 C
ATOM 24 P C B2720 94.668 207.054 107.877 1.00 84.52 P
ATOM 25 OP1 C B2720 93.343 206.935 107.221 1.00 84.56 O
ATOM 26 OP2 C B2720 94.780 207.767 109.177 1.00 84.49 O
ATOM 27 O5' C B2720 95.257 205.587 108.070 1.00 82.53 O
TER
Atoms:
OP1: (110.708,202.791,114.548)
OP2: (109.157,204.123,116.104)
C3': (107.459,204.986,111.380)
C1': (105.335,204.033,111.739)
C5': (108.686,203.031,112.467)
O6: (102.267,207.031,115.915)
O4': (106.319,203.070,112.070)
C8: (105.240,204.407,114.256)
C2: (101.997,206.659,112.388)
C6: (102.539,206.616,114.782)
C5: (103.575,205.726,114.385)
C4: (103.702,205.417,113.050)
P: (109.339,203.132,115.010)
C4': (107.600,203.482,111.531)
C2': (106.018,205.118,110.905)
O2': (105.833,204.837,109.531)
N1: (101.782,207.036,113.691)
N2: (101.167,207.175,111.471)
N3: (102.957,205.841,112.008)
N7: (104.548,205.076,115.136)
N9: (104.785,204.583,112.970)
O5': (108.512,203.643,113.752)
O3': (108.411,205.529,110.467)
OP2: (109.157,204.123,116.104)
C3': (107.459,204.986,111.380)
C1': (105.335,204.033,111.739)
C5': (108.686,203.031,112.467)
O6: (102.267,207.031,115.915)
O4': (106.319,203.070,112.070)
C8: (105.240,204.407,114.256)
C2: (101.997,206.659,112.388)
C6: (102.539,206.616,114.782)
C5: (103.575,205.726,114.385)
C4: (103.702,205.417,113.050)
P: (109.339,203.132,115.010)
C4': (107.600,203.482,111.531)
C2': (106.018,205.118,110.905)
O2': (105.833,204.837,109.531)
N1: (101.782,207.036,113.691)
N2: (101.167,207.175,111.471)
N3: (102.957,205.841,112.008)
N7: (104.548,205.076,115.136)
N9: (104.785,204.583,112.970)
O5': (108.512,203.643,113.752)
O3': (108.411,205.529,110.467)
OP1: (97.404,210.835,110.633)
OP2: (99.064,209.045,111.439)
C3': (97.064,207.601,106.948)
C1': (99.143,207.123,105.949)
C5': (97.853,209.861,107.872)
O4': (99.161,208.475,106.387)
C8: (100.137,206.555,108.231)
O2': (97.163,206.910,104.597)
C6: (101.933,203.559,107.771)
C5: (101.176,204.751,107.798)
C4: (100.602,205.158,106.606)
P: (98.617,210.004,110.396)
C4': (97.808,208.904,106.705)
C2': (97.678,206.686,105.896)
C2: (101.427,203.428,105.517)
N1: (102.041,202.909,106.591)
N3: (100.690,204.536,105.416)
N6: (102.543,203.041,108.840)
N7: (100.875,205.644,108.817)
N9: (99.927,206.322,106.893)
O5': (98.418,209.212,109.027)
O3': (95.654,207.740,106.803)
OP2: (99.064,209.045,111.439)
C3': (97.064,207.601,106.948)
C1': (99.143,207.123,105.949)
C5': (97.853,209.861,107.872)
O4': (99.161,208.475,106.387)
C8: (100.137,206.555,108.231)
O2': (97.163,206.910,104.597)
C6: (101.933,203.559,107.771)
C5: (101.176,204.751,107.798)
C4: (100.602,205.158,106.606)
P: (98.617,210.004,110.396)
C4': (97.808,208.904,106.705)
C2': (97.678,206.686,105.896)
C2: (101.427,203.428,105.517)
N1: (102.041,202.909,106.591)
N3: (100.690,204.536,105.416)
N6: (102.543,203.041,108.840)
N7: (100.875,205.644,108.817)
N9: (99.927,206.322,106.893)
O5': (98.418,209.212,109.027)
O3': (95.654,207.740,106.803)
Image (generated by PyMOL):