Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1879:A1878
Extra
PDB:
ATOM 1 O3' A A1878 -100.103 -12.717 60.283 1.00 28.09 O
ATOM 2 P U A1879 -99.306 -12.343 58.944 1.00 23.24 P
ATOM 3 OP1 U A1879 -100.204 -11.481 58.135 1.00 23.24 O
ATOM 4 OP2 U A1879 -98.811 -13.614 58.345 1.00 23.24 O
ATOM 5 O5' U A1879 -98.089 -11.493 59.520 1.00 23.24 O
ATOM 6 C5' U A1879 -98.340 -10.398 60.382 1.00 23.24 C
ATOM 7 C4' U A1879 -97.256 -10.221 61.409 1.00 23.24 C
ATOM 8 O4' U A1879 -97.218 -11.352 62.297 1.00 23.24 O
ATOM 9 C3' U A1879 -95.841 -10.141 60.891 1.00 23.24 C
ATOM 10 O3' U A1879 -95.543 -8.897 60.330 1.00 23.24 O
ATOM 11 C2' U A1879 -95.032 -10.443 62.131 1.00 23.24 C
ATOM 12 O2' U A1879 -94.946 -9.304 62.956 1.00 23.24 O
ATOM 13 C1' U A1879 -95.914 -11.478 62.825 1.00 23.24 C
ATOM 14 N1 U A1879 -95.435 -12.826 62.585 1.00 23.06 N
ATOM 15 C2 U A1879 -94.241 -13.113 63.186 1.00 23.06 C
ATOM 16 O2 U A1879 -93.662 -12.301 63.879 1.00 23.06 O
ATOM 17 N3 U A1879 -93.765 -14.370 62.939 1.00 23.06 N
ATOM 18 C4 U A1879 -94.367 -15.328 62.163 1.00 23.06 C
ATOM 19 O4 U A1879 -93.839 -16.422 62.030 1.00 23.06 O
ATOM 20 C5 U A1879 -95.608 -14.932 61.571 1.00 23.06 C
ATOM 21 C6 U A1879 -96.094 -13.707 61.790 1.00 23.06 C
ATOM 22 P C A1880 -94.845 -8.828 58.899 1.00 21.79 P
ATOM 23 OP1 C A1880 -94.948 -7.424 58.437 1.00 21.79 O
ATOM 24 OP2 C A1880 -95.449 -9.897 58.063 1.00 21.79 O
ATOM 25 O5' C A1880 -93.333 -9.177 59.241 1.00 21.79 O
TER
ATOM 1 O3' G B1877 -99.617 -19.211 60.743 1.00 27.51 O
ATOM 2 P A B1878 -99.188 -18.224 59.559 1.00 28.09 P
ATOM 3 OP1 A B1878 -99.249 -18.994 58.293 1.00 28.09 O
ATOM 4 OP2 A B1878 -97.891 -17.598 59.955 1.00 28.09 O
ATOM 5 O5' A B1878 -100.352 -17.148 59.592 1.00 28.09 O
ATOM 6 C5' A B1878 -100.062 -15.776 59.512 1.00 28.09 C
ATOM 7 C4' A B1878 -100.467 -15.059 60.760 1.00 28.09 C
ATOM 8 O4' A B1878 -100.239 -15.894 61.918 1.00 28.09 O
ATOM 9 C3' A B1878 -99.684 -13.808 61.062 1.00 28.09 C
ATOM 10 O3' A B1878 -100.103 -12.717 60.283 1.00 28.09 O
ATOM 11 C2' A B1878 -99.913 -13.623 62.545 1.00 28.09 C
ATOM 12 O2' A B1878 -101.179 -13.036 62.784 1.00 28.09 O
ATOM 13 C1' A B1878 -99.945 -15.070 63.033 1.00 28.09 C
ATOM 14 N9 A B1878 -98.656 -15.487 63.616 1.00 27.56 N
ATOM 15 C8 A B1878 -98.060 -16.701 63.450 1.00 27.56 C
ATOM 16 N7 A B1878 -96.917 -16.821 64.078 1.00 27.56 N
ATOM 17 C5 A B1878 -96.755 -15.610 64.703 1.00 27.56 C
ATOM 18 C6 A B1878 -95.723 -15.152 65.515 1.00 27.56 C
ATOM 19 N6 A B1878 -94.667 -15.910 65.818 1.00 27.56 N
ATOM 20 N1 A B1878 -95.821 -13.902 65.989 1.00 27.56 N
ATOM 21 C2 A B1878 -96.902 -13.202 65.646 1.00 27.56 C
ATOM 22 N3 A B1878 -97.935 -13.537 64.885 1.00 27.56 N
ATOM 23 C4 A B1878 -97.808 -14.776 64.434 1.00 27.56 C
ATOM 24 P U B1879 -99.306 -12.343 58.944 1.00 23.24 P
ATOM 25 OP1 U B1879 -100.204 -11.481 58.135 1.00 23.24 O
ATOM 26 OP2 U B1879 -98.811 -13.614 58.345 1.00 23.24 O
ATOM 27 O5' U B1879 -98.089 -11.493 59.520 1.00 23.24 O
TER
ATOM 2 P U A1879 -99.306 -12.343 58.944 1.00 23.24 P
ATOM 3 OP1 U A1879 -100.204 -11.481 58.135 1.00 23.24 O
ATOM 4 OP2 U A1879 -98.811 -13.614 58.345 1.00 23.24 O
ATOM 5 O5' U A1879 -98.089 -11.493 59.520 1.00 23.24 O
ATOM 6 C5' U A1879 -98.340 -10.398 60.382 1.00 23.24 C
ATOM 7 C4' U A1879 -97.256 -10.221 61.409 1.00 23.24 C
ATOM 8 O4' U A1879 -97.218 -11.352 62.297 1.00 23.24 O
ATOM 9 C3' U A1879 -95.841 -10.141 60.891 1.00 23.24 C
ATOM 10 O3' U A1879 -95.543 -8.897 60.330 1.00 23.24 O
ATOM 11 C2' U A1879 -95.032 -10.443 62.131 1.00 23.24 C
ATOM 12 O2' U A1879 -94.946 -9.304 62.956 1.00 23.24 O
ATOM 13 C1' U A1879 -95.914 -11.478 62.825 1.00 23.24 C
ATOM 14 N1 U A1879 -95.435 -12.826 62.585 1.00 23.06 N
ATOM 15 C2 U A1879 -94.241 -13.113 63.186 1.00 23.06 C
ATOM 16 O2 U A1879 -93.662 -12.301 63.879 1.00 23.06 O
ATOM 17 N3 U A1879 -93.765 -14.370 62.939 1.00 23.06 N
ATOM 18 C4 U A1879 -94.367 -15.328 62.163 1.00 23.06 C
ATOM 19 O4 U A1879 -93.839 -16.422 62.030 1.00 23.06 O
ATOM 20 C5 U A1879 -95.608 -14.932 61.571 1.00 23.06 C
ATOM 21 C6 U A1879 -96.094 -13.707 61.790 1.00 23.06 C
ATOM 22 P C A1880 -94.845 -8.828 58.899 1.00 21.79 P
ATOM 23 OP1 C A1880 -94.948 -7.424 58.437 1.00 21.79 O
ATOM 24 OP2 C A1880 -95.449 -9.897 58.063 1.00 21.79 O
ATOM 25 O5' C A1880 -93.333 -9.177 59.241 1.00 21.79 O
TER
ATOM 1 O3' G B1877 -99.617 -19.211 60.743 1.00 27.51 O
ATOM 2 P A B1878 -99.188 -18.224 59.559 1.00 28.09 P
ATOM 3 OP1 A B1878 -99.249 -18.994 58.293 1.00 28.09 O
ATOM 4 OP2 A B1878 -97.891 -17.598 59.955 1.00 28.09 O
ATOM 5 O5' A B1878 -100.352 -17.148 59.592 1.00 28.09 O
ATOM 6 C5' A B1878 -100.062 -15.776 59.512 1.00 28.09 C
ATOM 7 C4' A B1878 -100.467 -15.059 60.760 1.00 28.09 C
ATOM 8 O4' A B1878 -100.239 -15.894 61.918 1.00 28.09 O
ATOM 9 C3' A B1878 -99.684 -13.808 61.062 1.00 28.09 C
ATOM 10 O3' A B1878 -100.103 -12.717 60.283 1.00 28.09 O
ATOM 11 C2' A B1878 -99.913 -13.623 62.545 1.00 28.09 C
ATOM 12 O2' A B1878 -101.179 -13.036 62.784 1.00 28.09 O
ATOM 13 C1' A B1878 -99.945 -15.070 63.033 1.00 28.09 C
ATOM 14 N9 A B1878 -98.656 -15.487 63.616 1.00 27.56 N
ATOM 15 C8 A B1878 -98.060 -16.701 63.450 1.00 27.56 C
ATOM 16 N7 A B1878 -96.917 -16.821 64.078 1.00 27.56 N
ATOM 17 C5 A B1878 -96.755 -15.610 64.703 1.00 27.56 C
ATOM 18 C6 A B1878 -95.723 -15.152 65.515 1.00 27.56 C
ATOM 19 N6 A B1878 -94.667 -15.910 65.818 1.00 27.56 N
ATOM 20 N1 A B1878 -95.821 -13.902 65.989 1.00 27.56 N
ATOM 21 C2 A B1878 -96.902 -13.202 65.646 1.00 27.56 C
ATOM 22 N3 A B1878 -97.935 -13.537 64.885 1.00 27.56 N
ATOM 23 C4 A B1878 -97.808 -14.776 64.434 1.00 27.56 C
ATOM 24 P U B1879 -99.306 -12.343 58.944 1.00 23.24 P
ATOM 25 OP1 U B1879 -100.204 -11.481 58.135 1.00 23.24 O
ATOM 26 OP2 U B1879 -98.811 -13.614 58.345 1.00 23.24 O
ATOM 27 O5' U B1879 -98.089 -11.493 59.520 1.00 23.24 O
TER
Atoms:
C4: (-94.367,-15.328,62.163)
N3: (-93.765,-14.370,62.939)
OP1: (-100.204,-11.481,58.135)
OP2: (-98.811,-13.614,58.345)
C2: (-94.241,-13.113,63.186)
C1': (-95.914,-11.478,62.825)
C3': (-95.841,-10.141,60.891)
O5': (-98.089,-11.493,59.520)
O4': (-97.218,-11.352,62.297)
C5': (-98.340,-10.398,60.382)
P: (-99.306,-12.343,58.944)
C4': (-97.256,-10.221,61.409)
C2': (-95.032,-10.443,62.131)
O2': (-94.946,-9.304,62.956)
N1: (-95.435,-12.826,62.585)
O4: (-93.839,-16.422,62.030)
O2: (-93.662,-12.301,63.879)
C6: (-96.094,-13.707,61.790)
C5: (-95.608,-14.932,61.571)
O3': (-95.543,-8.897,60.330)
N3: (-93.765,-14.370,62.939)
OP1: (-100.204,-11.481,58.135)
OP2: (-98.811,-13.614,58.345)
C2: (-94.241,-13.113,63.186)
C1': (-95.914,-11.478,62.825)
C3': (-95.841,-10.141,60.891)
O5': (-98.089,-11.493,59.520)
O4': (-97.218,-11.352,62.297)
C5': (-98.340,-10.398,60.382)
P: (-99.306,-12.343,58.944)
C4': (-97.256,-10.221,61.409)
C2': (-95.032,-10.443,62.131)
O2': (-94.946,-9.304,62.956)
N1: (-95.435,-12.826,62.585)
O4: (-93.839,-16.422,62.030)
O2: (-93.662,-12.301,63.879)
C6: (-96.094,-13.707,61.790)
C5: (-95.608,-14.932,61.571)
O3': (-95.543,-8.897,60.330)
OP1: (-99.249,-18.994,58.293)
OP2: (-97.891,-17.598,59.955)
C3': (-99.684,-13.808,61.062)
C1': (-99.945,-15.070,63.033)
C5': (-100.062,-15.776,59.512)
O4': (-100.239,-15.894,61.918)
C8: (-98.060,-16.701,63.450)
O2': (-101.179,-13.036,62.784)
C6: (-95.723,-15.152,65.515)
C5: (-96.755,-15.610,64.703)
C4: (-97.808,-14.776,64.434)
P: (-99.188,-18.224,59.559)
C4': (-100.467,-15.059,60.760)
C2': (-99.913,-13.623,62.545)
C2: (-96.902,-13.202,65.646)
N1: (-95.821,-13.902,65.989)
N3: (-97.935,-13.537,64.885)
N6: (-94.667,-15.910,65.818)
N7: (-96.917,-16.821,64.078)
N9: (-98.656,-15.487,63.616)
O5': (-100.352,-17.148,59.592)
O3': (-100.103,-12.717,60.283)
OP2: (-97.891,-17.598,59.955)
C3': (-99.684,-13.808,61.062)
C1': (-99.945,-15.070,63.033)
C5': (-100.062,-15.776,59.512)
O4': (-100.239,-15.894,61.918)
C8: (-98.060,-16.701,63.450)
O2': (-101.179,-13.036,62.784)
C6: (-95.723,-15.152,65.515)
C5: (-96.755,-15.610,64.703)
C4: (-97.808,-14.776,64.434)
P: (-99.188,-18.224,59.559)
C4': (-100.467,-15.059,60.760)
C2': (-99.913,-13.623,62.545)
C2: (-96.902,-13.202,65.646)
N1: (-95.821,-13.902,65.989)
N3: (-97.935,-13.537,64.885)
N6: (-94.667,-15.910,65.818)
N7: (-96.917,-16.821,64.078)
N9: (-98.656,-15.487,63.616)
O5': (-100.352,-17.148,59.592)
O3': (-100.103,-12.717,60.283)
Image (generated by PyMOL):