Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3PDR:X41:X103
Extra
PDB:
ATOM 1 O3' U A 40 22.566 -21.173 20.107 1.00 36.33 O
ATOM 2 P G A 41 23.517 -19.877 19.945 1.00 36.17 P
ATOM 3 OP1 G A 41 24.832 -20.517 19.692 1.00 35.80 O
ATOM 4 OP2 G A 41 23.326 -18.998 21.126 1.00 31.36 O
ATOM 5 O5' G A 41 23.000 -19.142 18.633 1.00 30.68 O
ATOM 6 C5' G A 41 23.432 -19.596 17.362 1.00 34.20 C
ATOM 7 C4' G A 41 22.808 -18.800 16.250 1.00 35.56 C
ATOM 8 O4' G A 41 21.373 -18.739 16.453 1.00 35.48 O
ATOM 9 C3' G A 41 23.229 -17.340 16.148 1.00 33.37 C
ATOM 10 O3' G A 41 24.475 -17.162 15.494 1.00 35.81 O
ATOM 11 C2' G A 41 22.058 -16.725 15.402 1.00 33.96 C
ATOM 12 O2' G A 41 22.110 -17.029 14.017 1.00 39.96 O
ATOM 13 C1' G A 41 20.887 -17.488 16.018 1.00 33.44 C
ATOM 14 N9 G A 41 20.347 -16.758 17.182 1.00 31.14 N
ATOM 15 C8 G A 41 20.542 -17.012 18.520 1.00 29.92 C
ATOM 16 N7 G A 41 19.907 -16.163 19.291 1.00 28.93 N
ATOM 17 C5 G A 41 19.263 -15.305 18.409 1.00 29.54 C
ATOM 18 C6 G A 41 18.422 -14.182 18.638 1.00 28.30 C
ATOM 19 O6 G A 41 18.057 -13.685 19.713 1.00 25.46 O
ATOM 20 N1 G A 41 17.996 -13.621 17.440 1.00 28.44 N
ATOM 21 C2 G A 41 18.326 -14.062 16.183 1.00 30.47 C
ATOM 22 N2 G A 41 17.811 -13.385 15.149 1.00 32.44 N
ATOM 23 N3 G A 41 19.094 -15.103 15.956 1.00 30.37 N
ATOM 24 C4 G A 41 19.528 -15.665 17.104 1.00 30.22 C
ATOM 25 P C A 42 25.570 -16.098 16.012 1.00 36.31 P
ATOM 26 OP1 C A 42 26.751 -16.297 15.133 1.00 38.59 O
ATOM 27 OP2 C A 42 25.775 -16.184 17.484 1.00 30.68 O
ATOM 28 O5' C A 42 24.820 -14.767 15.616 1.00 33.18 O
TER
ATOM 1 O3' A B 102 18.060 -10.667 12.777 1.00 33.86 O
ATOM 2 P A B 103 16.561 -11.250 12.653 1.00 37.82 P
ATOM 3 OP1 A B 103 15.942 -10.725 11.415 1.00 38.97 O
ATOM 4 OP2 A B 103 15.885 -10.945 13.938 1.00 35.13 O
ATOM 5 O5' A B 103 16.843 -12.821 12.524 1.00 35.34 O
ATOM 6 C5' A B 103 17.346 -13.440 11.343 1.00 41.21 C
ATOM 7 C4' A B 103 16.821 -14.851 11.219 1.00 42.81 C
ATOM 8 O4' A B 103 17.055 -15.541 12.475 1.00 39.12 O
ATOM 9 C3' A B 103 15.316 -14.947 11.024 1.00 44.28 C
ATOM 10 O3' A B 103 14.908 -14.860 9.673 1.00 46.05 O
ATOM 11 C2' A B 103 14.937 -16.260 11.689 1.00 44.69 C
ATOM 12 O2' A B 103 15.242 -17.367 10.849 1.00 44.71 O
ATOM 13 C1' A B 103 15.904 -16.260 12.868 1.00 40.39 C
ATOM 14 N9 A B 103 15.345 -15.540 14.025 1.00 38.33 N
ATOM 15 C8 A B 103 14.475 -14.468 14.103 1.00 36.58 C
ATOM 16 N7 A B 103 14.228 -14.062 15.328 1.00 34.27 N
ATOM 17 C5 A B 103 14.996 -14.940 16.093 1.00 35.63 C
ATOM 18 C6 A B 103 15.202 -15.078 17.468 1.00 32.40 C
ATOM 19 N6 A B 103 14.634 -14.319 18.401 1.00 29.34 N
ATOM 20 N1 A B 103 16.042 -16.055 17.859 1.00 37.39 N
ATOM 21 C2 A B 103 16.632 -16.833 16.946 1.00 34.31 C
ATOM 22 N3 A B 103 16.525 -16.810 15.631 1.00 35.68 N
ATOM 23 C4 A B 103 15.681 -15.836 15.295 1.00 35.01 C
ATOM 24 P U B 104 13.734 -13.819 9.360 1.00 59.30 P
ATOM 25 OP1 U B 104 13.383 -14.002 7.926 1.00 63.87 O
ATOM 26 OP2 U B 104 14.266 -12.520 9.819 1.00 52.74 O
ATOM 27 O5' U B 104 12.527 -14.232 10.319 1.00 55.34 O
TER
ATOM 2 P G A 41 23.517 -19.877 19.945 1.00 36.17 P
ATOM 3 OP1 G A 41 24.832 -20.517 19.692 1.00 35.80 O
ATOM 4 OP2 G A 41 23.326 -18.998 21.126 1.00 31.36 O
ATOM 5 O5' G A 41 23.000 -19.142 18.633 1.00 30.68 O
ATOM 6 C5' G A 41 23.432 -19.596 17.362 1.00 34.20 C
ATOM 7 C4' G A 41 22.808 -18.800 16.250 1.00 35.56 C
ATOM 8 O4' G A 41 21.373 -18.739 16.453 1.00 35.48 O
ATOM 9 C3' G A 41 23.229 -17.340 16.148 1.00 33.37 C
ATOM 10 O3' G A 41 24.475 -17.162 15.494 1.00 35.81 O
ATOM 11 C2' G A 41 22.058 -16.725 15.402 1.00 33.96 C
ATOM 12 O2' G A 41 22.110 -17.029 14.017 1.00 39.96 O
ATOM 13 C1' G A 41 20.887 -17.488 16.018 1.00 33.44 C
ATOM 14 N9 G A 41 20.347 -16.758 17.182 1.00 31.14 N
ATOM 15 C8 G A 41 20.542 -17.012 18.520 1.00 29.92 C
ATOM 16 N7 G A 41 19.907 -16.163 19.291 1.00 28.93 N
ATOM 17 C5 G A 41 19.263 -15.305 18.409 1.00 29.54 C
ATOM 18 C6 G A 41 18.422 -14.182 18.638 1.00 28.30 C
ATOM 19 O6 G A 41 18.057 -13.685 19.713 1.00 25.46 O
ATOM 20 N1 G A 41 17.996 -13.621 17.440 1.00 28.44 N
ATOM 21 C2 G A 41 18.326 -14.062 16.183 1.00 30.47 C
ATOM 22 N2 G A 41 17.811 -13.385 15.149 1.00 32.44 N
ATOM 23 N3 G A 41 19.094 -15.103 15.956 1.00 30.37 N
ATOM 24 C4 G A 41 19.528 -15.665 17.104 1.00 30.22 C
ATOM 25 P C A 42 25.570 -16.098 16.012 1.00 36.31 P
ATOM 26 OP1 C A 42 26.751 -16.297 15.133 1.00 38.59 O
ATOM 27 OP2 C A 42 25.775 -16.184 17.484 1.00 30.68 O
ATOM 28 O5' C A 42 24.820 -14.767 15.616 1.00 33.18 O
TER
ATOM 1 O3' A B 102 18.060 -10.667 12.777 1.00 33.86 O
ATOM 2 P A B 103 16.561 -11.250 12.653 1.00 37.82 P
ATOM 3 OP1 A B 103 15.942 -10.725 11.415 1.00 38.97 O
ATOM 4 OP2 A B 103 15.885 -10.945 13.938 1.00 35.13 O
ATOM 5 O5' A B 103 16.843 -12.821 12.524 1.00 35.34 O
ATOM 6 C5' A B 103 17.346 -13.440 11.343 1.00 41.21 C
ATOM 7 C4' A B 103 16.821 -14.851 11.219 1.00 42.81 C
ATOM 8 O4' A B 103 17.055 -15.541 12.475 1.00 39.12 O
ATOM 9 C3' A B 103 15.316 -14.947 11.024 1.00 44.28 C
ATOM 10 O3' A B 103 14.908 -14.860 9.673 1.00 46.05 O
ATOM 11 C2' A B 103 14.937 -16.260 11.689 1.00 44.69 C
ATOM 12 O2' A B 103 15.242 -17.367 10.849 1.00 44.71 O
ATOM 13 C1' A B 103 15.904 -16.260 12.868 1.00 40.39 C
ATOM 14 N9 A B 103 15.345 -15.540 14.025 1.00 38.33 N
ATOM 15 C8 A B 103 14.475 -14.468 14.103 1.00 36.58 C
ATOM 16 N7 A B 103 14.228 -14.062 15.328 1.00 34.27 N
ATOM 17 C5 A B 103 14.996 -14.940 16.093 1.00 35.63 C
ATOM 18 C6 A B 103 15.202 -15.078 17.468 1.00 32.40 C
ATOM 19 N6 A B 103 14.634 -14.319 18.401 1.00 29.34 N
ATOM 20 N1 A B 103 16.042 -16.055 17.859 1.00 37.39 N
ATOM 21 C2 A B 103 16.632 -16.833 16.946 1.00 34.31 C
ATOM 22 N3 A B 103 16.525 -16.810 15.631 1.00 35.68 N
ATOM 23 C4 A B 103 15.681 -15.836 15.295 1.00 35.01 C
ATOM 24 P U B 104 13.734 -13.819 9.360 1.00 59.30 P
ATOM 25 OP1 U B 104 13.383 -14.002 7.926 1.00 63.87 O
ATOM 26 OP2 U B 104 14.266 -12.520 9.819 1.00 52.74 O
ATOM 27 O5' U B 104 12.527 -14.232 10.319 1.00 55.34 O
TER
Atoms:
OP1: (24.832,-20.517,19.692)
OP2: (23.326,-18.998,21.126)
C3': (23.229,-17.340,16.148)
C1': (20.887,-17.488,16.018)
C5': (23.432,-19.596,17.362)
O6: (18.057,-13.685,19.713)
O4': (21.373,-18.739,16.453)
C8: (20.542,-17.012,18.520)
C2: (18.326,-14.062,16.183)
C6: (18.422,-14.182,18.638)
C5: (19.263,-15.305,18.409)
C4: (19.528,-15.665,17.104)
P: (23.517,-19.877,19.945)
C4': (22.808,-18.800,16.250)
C2': (22.058,-16.725,15.402)
O2': (22.110,-17.029,14.017)
N1: (17.996,-13.621,17.440)
N2: (17.811,-13.385,15.149)
N3: (19.094,-15.103,15.956)
N7: (19.907,-16.163,19.291)
N9: (20.347,-16.758,17.182)
O5': (23.000,-19.142,18.633)
O3': (24.475,-17.162,15.494)
OP2: (23.326,-18.998,21.126)
C3': (23.229,-17.340,16.148)
C1': (20.887,-17.488,16.018)
C5': (23.432,-19.596,17.362)
O6: (18.057,-13.685,19.713)
O4': (21.373,-18.739,16.453)
C8: (20.542,-17.012,18.520)
C2: (18.326,-14.062,16.183)
C6: (18.422,-14.182,18.638)
C5: (19.263,-15.305,18.409)
C4: (19.528,-15.665,17.104)
P: (23.517,-19.877,19.945)
C4': (22.808,-18.800,16.250)
C2': (22.058,-16.725,15.402)
O2': (22.110,-17.029,14.017)
N1: (17.996,-13.621,17.440)
N2: (17.811,-13.385,15.149)
N3: (19.094,-15.103,15.956)
N7: (19.907,-16.163,19.291)
N9: (20.347,-16.758,17.182)
O5': (23.000,-19.142,18.633)
O3': (24.475,-17.162,15.494)
OP1: (15.942,-10.725,11.415)
OP2: (15.885,-10.945,13.938)
C3': (15.316,-14.947,11.024)
C1': (15.904,-16.260,12.868)
C5': (17.346,-13.440,11.343)
O4': (17.055,-15.541,12.475)
C8: (14.475,-14.468,14.103)
O2': (15.242,-17.367,10.849)
C6: (15.202,-15.078,17.468)
C5: (14.996,-14.940,16.093)
C4: (15.681,-15.836,15.295)
P: (16.561,-11.250,12.653)
C4': (16.821,-14.851,11.219)
C2': (14.937,-16.260,11.689)
C2: (16.632,-16.833,16.946)
N1: (16.042,-16.055,17.859)
N3: (16.525,-16.810,15.631)
N6: (14.634,-14.319,18.401)
N7: (14.228,-14.062,15.328)
N9: (15.345,-15.540,14.025)
O5': (16.843,-12.821,12.524)
O3': (14.908,-14.860,9.673)
OP2: (15.885,-10.945,13.938)
C3': (15.316,-14.947,11.024)
C1': (15.904,-16.260,12.868)
C5': (17.346,-13.440,11.343)
O4': (17.055,-15.541,12.475)
C8: (14.475,-14.468,14.103)
O2': (15.242,-17.367,10.849)
C6: (15.202,-15.078,17.468)
C5: (14.996,-14.940,16.093)
C4: (15.681,-15.836,15.295)
P: (16.561,-11.250,12.653)
C4': (16.821,-14.851,11.219)
C2': (14.937,-16.260,11.689)
C2: (16.632,-16.833,16.946)
N1: (16.042,-16.055,17.859)
N3: (16.525,-16.810,15.631)
N6: (14.634,-14.319,18.401)
N7: (14.228,-14.062,15.328)
N9: (15.345,-15.540,14.025)
O5': (16.843,-12.821,12.524)
O3': (14.908,-14.860,9.673)
Image (generated by PyMOL):