Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VBY:B66:B67
Extra
PDB:
ATOM 1 O3' A A 65 -28.509 51.393 8.682 1.00 86.65 O
ATOM 2 P A A 66 -29.474 52.517 8.090 1.00 90.31 P
ATOM 3 OP1 A A 66 -30.578 51.857 7.355 1.00 90.56 O
ATOM 4 OP2 A A 66 -28.589 53.485 7.384 1.00 90.06 O
ATOM 5 O5' A A 66 -30.072 53.218 9.388 1.00 90.52 O
ATOM 6 C5' A A 66 -30.733 52.458 10.402 1.00 91.07 C
ATOM 7 C4' A A 66 -30.498 53.100 11.745 1.00 91.39 C
ATOM 8 O4' A A 66 -29.083 53.029 12.046 1.00 90.81 O
ATOM 9 C3' A A 66 -30.827 54.584 11.784 1.00 92.27 C
ATOM 10 O3' A A 66 -32.201 54.798 12.062 1.00 95.16 O
ATOM 11 C2' A A 66 -29.896 55.107 12.868 1.00 90.90 C
ATOM 12 O2' A A 66 -30.404 54.883 14.166 1.00 90.97 O
ATOM 13 C1' A A 66 -28.659 54.234 12.652 1.00 88.58 C
ATOM 14 N9 A A 66 -27.696 54.845 11.743 1.00 84.83 N
ATOM 15 C8 A A 66 -27.863 55.080 10.402 1.00 83.65 C
ATOM 16 N7 A A 66 -26.819 55.618 9.828 1.00 82.87 N
ATOM 17 C5 A A 66 -25.905 55.750 10.860 1.00 82.02 C
ATOM 18 C6 A A 66 -24.602 56.247 10.898 1.00 81.31 C
ATOM 19 N6 A A 66 -23.964 56.721 9.830 1.00 80.92 N
ATOM 20 N1 A A 66 -23.964 56.239 12.087 1.00 81.37 N
ATOM 21 C2 A A 66 -24.607 55.761 13.156 1.00 81.49 C
ATOM 22 N3 A A 66 -25.834 55.262 13.243 1.00 81.58 N
ATOM 23 C4 A A 66 -26.435 55.284 12.046 1.00 82.64 C
ATOM 24 P U A 67 -33.103 55.622 11.016 1.00 98.01 P
ATOM 25 OP1 U A 67 -34.477 55.693 11.581 1.00 98.19 O
ATOM 26 OP2 U A 67 -32.897 55.047 9.654 1.00 97.19 O
ATOM 27 O5' U A 67 -32.465 57.082 11.042 1.00 97.84 O
TER
ATOM 1 O3' A B 66 -32.201 54.798 12.062 1.00 95.16 O
ATOM 2 P U B 67 -33.103 55.622 11.016 1.00 98.01 P
ATOM 3 OP1 U B 67 -34.477 55.693 11.581 1.00 98.19 O
ATOM 4 OP2 U B 67 -32.897 55.047 9.654 1.00 97.19 O
ATOM 5 O5' U B 67 -32.465 57.082 11.042 1.00 97.84 O
ATOM 6 C5' U B 67 -33.190 58.218 10.565 1.00 97.86 C
ATOM 7 C4' U B 67 -34.223 58.630 11.583 1.00 97.76 C
ATOM 8 O4' U B 67 -33.661 58.508 12.907 1.00 96.54 O
ATOM 9 C3' U B 67 -34.741 60.059 11.517 1.00 98.76 C
ATOM 10 O3' U B 67 -35.812 60.168 10.583 1.00101.60 O
ATOM 11 C2' U B 67 -35.236 60.311 12.942 1.00 97.53 C
ATOM 12 O2' U B 67 -36.567 59.876 13.130 1.00 98.78 O
ATOM 13 C1' U B 67 -34.328 59.401 13.768 1.00 94.98 C
ATOM 14 N1 U B 67 -33.341 60.041 14.641 1.00 90.69 N
ATOM 15 C2 U B 67 -33.618 60.023 15.991 1.00 89.71 C
ATOM 16 O2 U B 67 -34.651 59.543 16.443 1.00 89.15 O
ATOM 17 N3 U B 67 -32.648 60.576 16.789 1.00 87.58 N
ATOM 18 C4 U B 67 -31.454 61.139 16.370 1.00 86.72 C
ATOM 19 O4 U B 67 -30.668 61.587 17.206 1.00 85.21 O
ATOM 20 C5 U B 67 -31.257 61.135 14.947 1.00 86.76 C
ATOM 21 C6 U B 67 -32.189 60.605 14.152 1.00 88.04 C
ATOM 22 P G B 68 -36.650 61.543 10.480 1.00104.36 P
ATOM 23 OP1 G B 68 -37.704 61.350 9.452 1.00104.36 O
ATOM 24 OP2 G B 68 -35.689 62.671 10.345 1.00104.01 O
ATOM 25 O5' G B 68 -37.367 61.680 11.897 1.00104.72 O
TER
ATOM 2 P A A 66 -29.474 52.517 8.090 1.00 90.31 P
ATOM 3 OP1 A A 66 -30.578 51.857 7.355 1.00 90.56 O
ATOM 4 OP2 A A 66 -28.589 53.485 7.384 1.00 90.06 O
ATOM 5 O5' A A 66 -30.072 53.218 9.388 1.00 90.52 O
ATOM 6 C5' A A 66 -30.733 52.458 10.402 1.00 91.07 C
ATOM 7 C4' A A 66 -30.498 53.100 11.745 1.00 91.39 C
ATOM 8 O4' A A 66 -29.083 53.029 12.046 1.00 90.81 O
ATOM 9 C3' A A 66 -30.827 54.584 11.784 1.00 92.27 C
ATOM 10 O3' A A 66 -32.201 54.798 12.062 1.00 95.16 O
ATOM 11 C2' A A 66 -29.896 55.107 12.868 1.00 90.90 C
ATOM 12 O2' A A 66 -30.404 54.883 14.166 1.00 90.97 O
ATOM 13 C1' A A 66 -28.659 54.234 12.652 1.00 88.58 C
ATOM 14 N9 A A 66 -27.696 54.845 11.743 1.00 84.83 N
ATOM 15 C8 A A 66 -27.863 55.080 10.402 1.00 83.65 C
ATOM 16 N7 A A 66 -26.819 55.618 9.828 1.00 82.87 N
ATOM 17 C5 A A 66 -25.905 55.750 10.860 1.00 82.02 C
ATOM 18 C6 A A 66 -24.602 56.247 10.898 1.00 81.31 C
ATOM 19 N6 A A 66 -23.964 56.721 9.830 1.00 80.92 N
ATOM 20 N1 A A 66 -23.964 56.239 12.087 1.00 81.37 N
ATOM 21 C2 A A 66 -24.607 55.761 13.156 1.00 81.49 C
ATOM 22 N3 A A 66 -25.834 55.262 13.243 1.00 81.58 N
ATOM 23 C4 A A 66 -26.435 55.284 12.046 1.00 82.64 C
ATOM 24 P U A 67 -33.103 55.622 11.016 1.00 98.01 P
ATOM 25 OP1 U A 67 -34.477 55.693 11.581 1.00 98.19 O
ATOM 26 OP2 U A 67 -32.897 55.047 9.654 1.00 97.19 O
ATOM 27 O5' U A 67 -32.465 57.082 11.042 1.00 97.84 O
TER
ATOM 1 O3' A B 66 -32.201 54.798 12.062 1.00 95.16 O
ATOM 2 P U B 67 -33.103 55.622 11.016 1.00 98.01 P
ATOM 3 OP1 U B 67 -34.477 55.693 11.581 1.00 98.19 O
ATOM 4 OP2 U B 67 -32.897 55.047 9.654 1.00 97.19 O
ATOM 5 O5' U B 67 -32.465 57.082 11.042 1.00 97.84 O
ATOM 6 C5' U B 67 -33.190 58.218 10.565 1.00 97.86 C
ATOM 7 C4' U B 67 -34.223 58.630 11.583 1.00 97.76 C
ATOM 8 O4' U B 67 -33.661 58.508 12.907 1.00 96.54 O
ATOM 9 C3' U B 67 -34.741 60.059 11.517 1.00 98.76 C
ATOM 10 O3' U B 67 -35.812 60.168 10.583 1.00101.60 O
ATOM 11 C2' U B 67 -35.236 60.311 12.942 1.00 97.53 C
ATOM 12 O2' U B 67 -36.567 59.876 13.130 1.00 98.78 O
ATOM 13 C1' U B 67 -34.328 59.401 13.768 1.00 94.98 C
ATOM 14 N1 U B 67 -33.341 60.041 14.641 1.00 90.69 N
ATOM 15 C2 U B 67 -33.618 60.023 15.991 1.00 89.71 C
ATOM 16 O2 U B 67 -34.651 59.543 16.443 1.00 89.15 O
ATOM 17 N3 U B 67 -32.648 60.576 16.789 1.00 87.58 N
ATOM 18 C4 U B 67 -31.454 61.139 16.370 1.00 86.72 C
ATOM 19 O4 U B 67 -30.668 61.587 17.206 1.00 85.21 O
ATOM 20 C5 U B 67 -31.257 61.135 14.947 1.00 86.76 C
ATOM 21 C6 U B 67 -32.189 60.605 14.152 1.00 88.04 C
ATOM 22 P G B 68 -36.650 61.543 10.480 1.00104.36 P
ATOM 23 OP1 G B 68 -37.704 61.350 9.452 1.00104.36 O
ATOM 24 OP2 G B 68 -35.689 62.671 10.345 1.00104.01 O
ATOM 25 O5' G B 68 -37.367 61.680 11.897 1.00104.72 O
TER
Atoms:
OP1: (-30.578,51.857,7.355)
OP2: (-28.589,53.485,7.384)
C3': (-30.827,54.584,11.784)
C1': (-28.659,54.234,12.652)
C5': (-30.733,52.458,10.402)
O4': (-29.083,53.029,12.046)
C8: (-27.863,55.080,10.402)
O2': (-30.404,54.883,14.166)
C6: (-24.602,56.247,10.898)
C5: (-25.905,55.750,10.860)
C4: (-26.435,55.284,12.046)
P: (-29.474,52.517,8.090)
C4': (-30.498,53.100,11.745)
C2': (-29.896,55.107,12.868)
C2: (-24.607,55.761,13.156)
N1: (-23.964,56.239,12.087)
N3: (-25.834,55.262,13.243)
N6: (-23.964,56.721,9.830)
N7: (-26.819,55.618,9.828)
N9: (-27.696,54.845,11.743)
O5': (-30.072,53.218,9.388)
O3': (-32.201,54.798,12.062)
OP2: (-28.589,53.485,7.384)
C3': (-30.827,54.584,11.784)
C1': (-28.659,54.234,12.652)
C5': (-30.733,52.458,10.402)
O4': (-29.083,53.029,12.046)
C8: (-27.863,55.080,10.402)
O2': (-30.404,54.883,14.166)
C6: (-24.602,56.247,10.898)
C5: (-25.905,55.750,10.860)
C4: (-26.435,55.284,12.046)
P: (-29.474,52.517,8.090)
C4': (-30.498,53.100,11.745)
C2': (-29.896,55.107,12.868)
C2: (-24.607,55.761,13.156)
N1: (-23.964,56.239,12.087)
N3: (-25.834,55.262,13.243)
N6: (-23.964,56.721,9.830)
N7: (-26.819,55.618,9.828)
N9: (-27.696,54.845,11.743)
O5': (-30.072,53.218,9.388)
O3': (-32.201,54.798,12.062)
C4: (-31.454,61.139,16.370)
N3: (-32.648,60.576,16.789)
OP1: (-34.477,55.693,11.581)
OP2: (-32.897,55.047,9.654)
C2: (-33.618,60.023,15.991)
C1': (-34.328,59.401,13.768)
C3': (-34.741,60.059,11.517)
O5': (-32.465,57.082,11.042)
O4': (-33.661,58.508,12.907)
C5': (-33.190,58.218,10.565)
P: (-33.103,55.622,11.016)
C4': (-34.223,58.630,11.583)
C2': (-35.236,60.311,12.942)
O2': (-36.567,59.876,13.130)
N1: (-33.341,60.041,14.641)
O4: (-30.668,61.587,17.206)
O2: (-34.651,59.543,16.443)
C6: (-32.189,60.605,14.152)
C5: (-31.257,61.135,14.947)
O3': (-35.812,60.168,10.583)
N3: (-32.648,60.576,16.789)
OP1: (-34.477,55.693,11.581)
OP2: (-32.897,55.047,9.654)
C2: (-33.618,60.023,15.991)
C1': (-34.328,59.401,13.768)
C3': (-34.741,60.059,11.517)
O5': (-32.465,57.082,11.042)
O4': (-33.661,58.508,12.907)
C5': (-33.190,58.218,10.565)
P: (-33.103,55.622,11.016)
C4': (-34.223,58.630,11.583)
C2': (-35.236,60.311,12.942)
O2': (-36.567,59.876,13.130)
N1: (-33.341,60.041,14.641)
O4: (-30.668,61.587,17.206)
O2: (-34.651,59.543,16.443)
C6: (-32.189,60.605,14.152)
C5: (-31.257,61.135,14.947)
O3': (-35.812,60.168,10.583)
Image (generated by PyMOL):