Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1054:A1062
Extra
PDB:
ATOM 1 O3' U A1053 -138.749 -46.457 -66.829 1.00108.88 O
ATOM 2 P U A1054 -138.162 -45.953 -68.250 1.00115.00 P
ATOM 3 OP1 U A1054 -138.823 -44.654 -68.549 1.00115.00 O
ATOM 4 OP2 U A1054 -138.328 -47.076 -69.216 1.00115.00 O
ATOM 5 O5' U A1054 -136.603 -45.716 -67.944 1.00115.00 O
ATOM 6 C5' U A1054 -135.952 -44.472 -68.245 1.00115.00 C
ATOM 7 C4' U A1054 -134.927 -44.112 -67.185 1.00115.00 C
ATOM 8 O4' U A1054 -134.028 -43.080 -67.684 1.00115.00 O
ATOM 9 C3' U A1054 -135.508 -43.580 -65.867 1.00115.00 C
ATOM 10 O3' U A1054 -134.924 -44.244 -64.769 1.00115.00 O
ATOM 11 C2' U A1054 -135.097 -42.112 -65.837 1.00115.00 C
ATOM 12 O2' U A1054 -134.901 -41.571 -64.539 1.00115.00 O
ATOM 13 C1' U A1054 -133.812 -42.126 -66.659 1.00115.00 C
ATOM 14 N1 U A1054 -133.495 -40.803 -67.261 1.00115.07 N
ATOM 15 C2 U A1054 -133.873 -40.406 -68.547 1.00115.07 C
ATOM 16 O2 U A1054 -134.448 -41.137 -69.347 1.00115.07 O
ATOM 17 N3 U A1054 -133.508 -39.101 -68.864 1.00115.07 N
ATOM 18 C4 U A1054 -132.853 -38.182 -68.045 1.00115.07 C
ATOM 19 O4 U A1054 -132.596 -37.050 -68.457 1.00115.07 O
ATOM 20 C5 U A1054 -132.530 -38.660 -66.737 1.00115.07 C
ATOM 21 C6 U A1054 -132.870 -39.911 -66.410 1.00115.07 C
ATOM 22 P G A1055 -135.675 -44.211 -63.359 1.00106.37 P
ATOM 23 OP1 G A1055 -134.648 -44.374 -62.305 1.00106.37 O
ATOM 24 OP2 G A1055 -136.775 -45.197 -63.442 1.00106.37 O
ATOM 25 O5' G A1055 -136.271 -42.736 -63.299 1.00106.37 O
TER
ATOM 1 O3' G B1061 -127.486 -35.429 -64.849 1.00160.13 O
ATOM 2 P A B1062 -128.882 -36.176 -64.484 1.00142.10 P
ATOM 3 OP1 A B1062 -129.214 -37.069 -65.634 1.00142.10 O
ATOM 4 OP2 A B1062 -129.861 -35.119 -64.101 1.00142.10 O
ATOM 5 O5' A B1062 -128.506 -37.060 -63.198 1.00142.10 O
ATOM 6 C5' A B1062 -127.882 -38.333 -63.336 1.00142.10 C
ATOM 7 C4' A B1062 -128.324 -39.310 -62.265 1.00142.10 C
ATOM 8 O4' A B1062 -127.549 -39.125 -61.052 1.00142.10 O
ATOM 9 C3' A B1062 -129.764 -39.202 -61.773 1.00142.10 C
ATOM 10 O3' A B1062 -130.734 -39.701 -62.694 1.00142.10 O
ATOM 11 C2' A B1062 -129.699 -39.979 -60.458 1.00142.10 C
ATOM 12 O2' A B1062 -129.725 -41.383 -60.685 1.00142.10 O
ATOM 13 C1' A B1062 -128.306 -39.591 -59.943 1.00142.10 C
ATOM 14 N9 A B1062 -128.374 -38.539 -58.902 1.00140.35 N
ATOM 15 C8 A B1062 -128.953 -37.288 -58.965 1.00140.35 C
ATOM 16 N7 A B1062 -128.865 -36.606 -57.845 1.00140.35 N
ATOM 17 C5 A B1062 -128.202 -37.468 -56.975 1.00140.35 C
ATOM 18 C6 A B1062 -127.797 -37.341 -55.630 1.00140.35 C
ATOM 19 N6 A B1062 -128.018 -36.245 -54.899 1.00140.35 N
ATOM 20 N1 A B1062 -127.152 -38.384 -55.054 1.00140.35 N
ATOM 21 C2 A B1062 -126.933 -39.480 -55.791 1.00140.35 C
ATOM 22 N3 A B1062 -127.264 -39.718 -57.060 1.00140.35 N
ATOM 23 C4 A B1062 -127.903 -38.663 -57.607 1.00140.35 C
ATOM 24 P A B1063 -132.271 -39.186 -62.623 1.00143.24 P
ATOM 25 OP1 A B1063 -132.591 -38.574 -63.940 1.00143.24 O
ATOM 26 OP2 A B1063 -132.403 -38.349 -61.399 1.00143.24 O
ATOM 27 O5' A B1063 -133.094 -40.543 -62.442 1.00143.24 O
TER
ATOM 2 P U A1054 -138.162 -45.953 -68.250 1.00115.00 P
ATOM 3 OP1 U A1054 -138.823 -44.654 -68.549 1.00115.00 O
ATOM 4 OP2 U A1054 -138.328 -47.076 -69.216 1.00115.00 O
ATOM 5 O5' U A1054 -136.603 -45.716 -67.944 1.00115.00 O
ATOM 6 C5' U A1054 -135.952 -44.472 -68.245 1.00115.00 C
ATOM 7 C4' U A1054 -134.927 -44.112 -67.185 1.00115.00 C
ATOM 8 O4' U A1054 -134.028 -43.080 -67.684 1.00115.00 O
ATOM 9 C3' U A1054 -135.508 -43.580 -65.867 1.00115.00 C
ATOM 10 O3' U A1054 -134.924 -44.244 -64.769 1.00115.00 O
ATOM 11 C2' U A1054 -135.097 -42.112 -65.837 1.00115.00 C
ATOM 12 O2' U A1054 -134.901 -41.571 -64.539 1.00115.00 O
ATOM 13 C1' U A1054 -133.812 -42.126 -66.659 1.00115.00 C
ATOM 14 N1 U A1054 -133.495 -40.803 -67.261 1.00115.07 N
ATOM 15 C2 U A1054 -133.873 -40.406 -68.547 1.00115.07 C
ATOM 16 O2 U A1054 -134.448 -41.137 -69.347 1.00115.07 O
ATOM 17 N3 U A1054 -133.508 -39.101 -68.864 1.00115.07 N
ATOM 18 C4 U A1054 -132.853 -38.182 -68.045 1.00115.07 C
ATOM 19 O4 U A1054 -132.596 -37.050 -68.457 1.00115.07 O
ATOM 20 C5 U A1054 -132.530 -38.660 -66.737 1.00115.07 C
ATOM 21 C6 U A1054 -132.870 -39.911 -66.410 1.00115.07 C
ATOM 22 P G A1055 -135.675 -44.211 -63.359 1.00106.37 P
ATOM 23 OP1 G A1055 -134.648 -44.374 -62.305 1.00106.37 O
ATOM 24 OP2 G A1055 -136.775 -45.197 -63.442 1.00106.37 O
ATOM 25 O5' G A1055 -136.271 -42.736 -63.299 1.00106.37 O
TER
ATOM 1 O3' G B1061 -127.486 -35.429 -64.849 1.00160.13 O
ATOM 2 P A B1062 -128.882 -36.176 -64.484 1.00142.10 P
ATOM 3 OP1 A B1062 -129.214 -37.069 -65.634 1.00142.10 O
ATOM 4 OP2 A B1062 -129.861 -35.119 -64.101 1.00142.10 O
ATOM 5 O5' A B1062 -128.506 -37.060 -63.198 1.00142.10 O
ATOM 6 C5' A B1062 -127.882 -38.333 -63.336 1.00142.10 C
ATOM 7 C4' A B1062 -128.324 -39.310 -62.265 1.00142.10 C
ATOM 8 O4' A B1062 -127.549 -39.125 -61.052 1.00142.10 O
ATOM 9 C3' A B1062 -129.764 -39.202 -61.773 1.00142.10 C
ATOM 10 O3' A B1062 -130.734 -39.701 -62.694 1.00142.10 O
ATOM 11 C2' A B1062 -129.699 -39.979 -60.458 1.00142.10 C
ATOM 12 O2' A B1062 -129.725 -41.383 -60.685 1.00142.10 O
ATOM 13 C1' A B1062 -128.306 -39.591 -59.943 1.00142.10 C
ATOM 14 N9 A B1062 -128.374 -38.539 -58.902 1.00140.35 N
ATOM 15 C8 A B1062 -128.953 -37.288 -58.965 1.00140.35 C
ATOM 16 N7 A B1062 -128.865 -36.606 -57.845 1.00140.35 N
ATOM 17 C5 A B1062 -128.202 -37.468 -56.975 1.00140.35 C
ATOM 18 C6 A B1062 -127.797 -37.341 -55.630 1.00140.35 C
ATOM 19 N6 A B1062 -128.018 -36.245 -54.899 1.00140.35 N
ATOM 20 N1 A B1062 -127.152 -38.384 -55.054 1.00140.35 N
ATOM 21 C2 A B1062 -126.933 -39.480 -55.791 1.00140.35 C
ATOM 22 N3 A B1062 -127.264 -39.718 -57.060 1.00140.35 N
ATOM 23 C4 A B1062 -127.903 -38.663 -57.607 1.00140.35 C
ATOM 24 P A B1063 -132.271 -39.186 -62.623 1.00143.24 P
ATOM 25 OP1 A B1063 -132.591 -38.574 -63.940 1.00143.24 O
ATOM 26 OP2 A B1063 -132.403 -38.349 -61.399 1.00143.24 O
ATOM 27 O5' A B1063 -133.094 -40.543 -62.442 1.00143.24 O
TER
Atoms:
C4: (-132.853,-38.182,-68.045)
N3: (-133.508,-39.101,-68.864)
OP1: (-138.823,-44.654,-68.549)
OP2: (-138.328,-47.076,-69.216)
C2: (-133.873,-40.406,-68.547)
C1': (-133.812,-42.126,-66.659)
C3': (-135.508,-43.580,-65.867)
O5': (-136.603,-45.716,-67.944)
O4': (-134.028,-43.080,-67.684)
C5': (-135.952,-44.472,-68.245)
P: (-138.162,-45.953,-68.250)
C4': (-134.927,-44.112,-67.185)
C2': (-135.097,-42.112,-65.837)
O2': (-134.901,-41.571,-64.539)
N1: (-133.495,-40.803,-67.261)
O4: (-132.596,-37.050,-68.457)
O2: (-134.448,-41.137,-69.347)
C6: (-132.870,-39.911,-66.410)
C5: (-132.530,-38.660,-66.737)
O3': (-134.924,-44.244,-64.769)
N3: (-133.508,-39.101,-68.864)
OP1: (-138.823,-44.654,-68.549)
OP2: (-138.328,-47.076,-69.216)
C2: (-133.873,-40.406,-68.547)
C1': (-133.812,-42.126,-66.659)
C3': (-135.508,-43.580,-65.867)
O5': (-136.603,-45.716,-67.944)
O4': (-134.028,-43.080,-67.684)
C5': (-135.952,-44.472,-68.245)
P: (-138.162,-45.953,-68.250)
C4': (-134.927,-44.112,-67.185)
C2': (-135.097,-42.112,-65.837)
O2': (-134.901,-41.571,-64.539)
N1: (-133.495,-40.803,-67.261)
O4: (-132.596,-37.050,-68.457)
O2: (-134.448,-41.137,-69.347)
C6: (-132.870,-39.911,-66.410)
C5: (-132.530,-38.660,-66.737)
O3': (-134.924,-44.244,-64.769)
OP1: (-129.214,-37.069,-65.634)
OP2: (-129.861,-35.119,-64.101)
C3': (-129.764,-39.202,-61.773)
C1': (-128.306,-39.591,-59.943)
C5': (-127.882,-38.333,-63.336)
O4': (-127.549,-39.125,-61.052)
C8: (-128.953,-37.288,-58.965)
O2': (-129.725,-41.383,-60.685)
C6: (-127.797,-37.341,-55.630)
C5: (-128.202,-37.468,-56.975)
C4: (-127.903,-38.663,-57.607)
P: (-128.882,-36.176,-64.484)
C4': (-128.324,-39.310,-62.265)
C2': (-129.699,-39.979,-60.458)
C2: (-126.933,-39.480,-55.791)
N1: (-127.152,-38.384,-55.054)
N3: (-127.264,-39.718,-57.060)
N6: (-128.018,-36.245,-54.899)
N7: (-128.865,-36.606,-57.845)
N9: (-128.374,-38.539,-58.902)
O5': (-128.506,-37.060,-63.198)
O3': (-130.734,-39.701,-62.694)
OP2: (-129.861,-35.119,-64.101)
C3': (-129.764,-39.202,-61.773)
C1': (-128.306,-39.591,-59.943)
C5': (-127.882,-38.333,-63.336)
O4': (-127.549,-39.125,-61.052)
C8: (-128.953,-37.288,-58.965)
O2': (-129.725,-41.383,-60.685)
C6: (-127.797,-37.341,-55.630)
C5: (-128.202,-37.468,-56.975)
C4: (-127.903,-38.663,-57.607)
P: (-128.882,-36.176,-64.484)
C4': (-128.324,-39.310,-62.265)
C2': (-129.699,-39.979,-60.458)
C2: (-126.933,-39.480,-55.791)
N1: (-127.152,-38.384,-55.054)
N3: (-127.264,-39.718,-57.060)
N6: (-128.018,-36.245,-54.899)
N7: (-128.865,-36.606,-57.845)
N9: (-128.374,-38.539,-58.902)
O5': (-128.506,-37.060,-63.198)
O3': (-130.734,-39.701,-62.694)
Image (generated by PyMOL):