Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:0565:0568
Extra
PDB:
ATOM 1 O3' C A 564 1.557 81.250 133.769 1.00 79.29 O
ATOM 2 P G A 565 2.131 81.809 135.158 1.00 79.61 P
ATOM 3 OP1 G A 565 2.719 80.657 135.888 1.00 80.43 O
ATOM 4 OP2 G A 565 1.079 82.641 135.811 1.00 78.40 O
ATOM 5 O5' G A 565 3.318 82.772 134.708 1.00 79.98 O
ATOM 6 C5' G A 565 4.393 82.285 133.875 1.00 77.47 C
ATOM 7 C4' G A 565 5.261 83.431 133.401 1.00 75.03 C
ATOM 8 O4' G A 565 4.500 84.309 132.524 1.00 74.36 O
ATOM 9 C3' G A 565 5.759 84.370 134.482 1.00 73.77 C
ATOM 10 O3' G A 565 6.843 83.833 135.231 1.00 70.76 O
ATOM 11 C2' G A 565 6.113 85.611 133.674 1.00 74.27 C
ATOM 12 O2' G A 565 7.324 85.493 132.951 1.00 75.43 O
ATOM 13 C1' G A 565 4.950 85.649 132.683 1.00 74.25 C
ATOM 14 N9 G A 565 3.845 86.461 133.185 1.00 74.05 N
ATOM 15 C8 G A 565 2.685 86.015 133.766 1.00 74.11 C
ATOM 16 N7 G A 565 1.896 86.984 134.142 1.00 74.81 N
ATOM 17 C5 G A 565 2.572 88.139 133.784 1.00 73.67 C
ATOM 18 C6 G A 565 2.213 89.496 133.952 1.00 73.74 C
ATOM 19 O6 G A 565 1.196 89.964 134.475 1.00 74.00 O
ATOM 20 N1 G A 565 3.187 90.348 133.443 1.00 73.84 N
ATOM 21 C2 G A 565 4.359 89.945 132.856 1.00 74.15 C
ATOM 22 N2 G A 565 5.174 90.920 132.427 1.00 74.09 N
ATOM 23 N3 G A 565 4.708 88.680 132.701 1.00 74.58 N
ATOM 24 C4 G A 565 3.773 87.836 133.185 1.00 74.10 C
ATOM 25 P C A 566 6.761 83.831 136.838 1.00 67.96 P
ATOM 26 OP1 C A 566 8.096 83.498 137.388 1.00 69.45 O
ATOM 27 OP2 C A 566 5.585 83.001 137.207 1.00 68.54 O
ATOM 28 O5' C A 566 6.440 85.345 137.212 1.00 65.84 O
TER
ATOM 1 O3' G B 567 6.354 94.033 135.035 1.00 52.46 O
ATOM 2 P A B 568 5.285 94.405 133.898 1.00 52.58 P
ATOM 3 OP1 A B 568 4.532 95.586 134.393 1.00 51.32 O
ATOM 4 OP2 A B 568 4.551 93.173 133.511 1.00 51.82 O
ATOM 5 O5' A B 568 6.170 94.864 132.654 1.00 53.91 O
ATOM 6 C5' A B 568 6.800 96.166 132.620 1.00 53.09 C
ATOM 7 C4' A B 568 7.895 96.192 131.577 1.00 52.15 C
ATOM 8 O4' A B 568 8.871 95.169 131.900 1.00 51.64 O
ATOM 9 C3' A B 568 7.464 95.867 130.156 1.00 52.35 C
ATOM 10 O3' A B 568 7.009 97.028 129.478 1.00 54.13 O
ATOM 11 C2' A B 568 8.758 95.367 129.536 1.00 52.03 C
ATOM 12 O2' A B 568 9.618 96.419 129.160 1.00 54.95 O
ATOM 13 C1' A B 568 9.382 94.609 130.709 1.00 51.36 C
ATOM 14 N9 A B 568 9.040 93.193 130.684 1.00 51.36 N
ATOM 15 C8 A B 568 7.818 92.610 130.911 1.00 51.87 C
ATOM 16 N7 A B 568 7.820 91.309 130.761 1.00 52.75 N
ATOM 17 C5 A B 568 9.133 91.014 130.424 1.00 51.46 C
ATOM 18 C6 A B 568 9.784 89.809 130.125 1.00 50.26 C
ATOM 19 N6 A B 568 9.175 88.624 130.103 1.00 50.61 N
ATOM 20 N1 A B 568 11.100 89.863 129.839 1.00 50.78 N
ATOM 21 C2 A B 568 11.713 91.051 129.848 1.00 51.10 C
ATOM 22 N3 A B 568 11.210 92.252 130.105 1.00 52.15 N
ATOM 23 C4 A B 568 9.899 92.164 130.389 1.00 52.12 C
ATOM 24 P G B 569 5.518 97.082 128.882 1.00 56.73 P
ATOM 25 OP1 G B 569 5.452 98.241 127.954 1.00 58.03 O
ATOM 26 OP2 G B 569 4.571 97.003 130.020 1.00 57.78 O
ATOM 27 O5' G B 569 5.364 95.752 128.013 1.00 57.06 O
TER
ATOM 2 P G A 565 2.131 81.809 135.158 1.00 79.61 P
ATOM 3 OP1 G A 565 2.719 80.657 135.888 1.00 80.43 O
ATOM 4 OP2 G A 565 1.079 82.641 135.811 1.00 78.40 O
ATOM 5 O5' G A 565 3.318 82.772 134.708 1.00 79.98 O
ATOM 6 C5' G A 565 4.393 82.285 133.875 1.00 77.47 C
ATOM 7 C4' G A 565 5.261 83.431 133.401 1.00 75.03 C
ATOM 8 O4' G A 565 4.500 84.309 132.524 1.00 74.36 O
ATOM 9 C3' G A 565 5.759 84.370 134.482 1.00 73.77 C
ATOM 10 O3' G A 565 6.843 83.833 135.231 1.00 70.76 O
ATOM 11 C2' G A 565 6.113 85.611 133.674 1.00 74.27 C
ATOM 12 O2' G A 565 7.324 85.493 132.951 1.00 75.43 O
ATOM 13 C1' G A 565 4.950 85.649 132.683 1.00 74.25 C
ATOM 14 N9 G A 565 3.845 86.461 133.185 1.00 74.05 N
ATOM 15 C8 G A 565 2.685 86.015 133.766 1.00 74.11 C
ATOM 16 N7 G A 565 1.896 86.984 134.142 1.00 74.81 N
ATOM 17 C5 G A 565 2.572 88.139 133.784 1.00 73.67 C
ATOM 18 C6 G A 565 2.213 89.496 133.952 1.00 73.74 C
ATOM 19 O6 G A 565 1.196 89.964 134.475 1.00 74.00 O
ATOM 20 N1 G A 565 3.187 90.348 133.443 1.00 73.84 N
ATOM 21 C2 G A 565 4.359 89.945 132.856 1.00 74.15 C
ATOM 22 N2 G A 565 5.174 90.920 132.427 1.00 74.09 N
ATOM 23 N3 G A 565 4.708 88.680 132.701 1.00 74.58 N
ATOM 24 C4 G A 565 3.773 87.836 133.185 1.00 74.10 C
ATOM 25 P C A 566 6.761 83.831 136.838 1.00 67.96 P
ATOM 26 OP1 C A 566 8.096 83.498 137.388 1.00 69.45 O
ATOM 27 OP2 C A 566 5.585 83.001 137.207 1.00 68.54 O
ATOM 28 O5' C A 566 6.440 85.345 137.212 1.00 65.84 O
TER
ATOM 1 O3' G B 567 6.354 94.033 135.035 1.00 52.46 O
ATOM 2 P A B 568 5.285 94.405 133.898 1.00 52.58 P
ATOM 3 OP1 A B 568 4.532 95.586 134.393 1.00 51.32 O
ATOM 4 OP2 A B 568 4.551 93.173 133.511 1.00 51.82 O
ATOM 5 O5' A B 568 6.170 94.864 132.654 1.00 53.91 O
ATOM 6 C5' A B 568 6.800 96.166 132.620 1.00 53.09 C
ATOM 7 C4' A B 568 7.895 96.192 131.577 1.00 52.15 C
ATOM 8 O4' A B 568 8.871 95.169 131.900 1.00 51.64 O
ATOM 9 C3' A B 568 7.464 95.867 130.156 1.00 52.35 C
ATOM 10 O3' A B 568 7.009 97.028 129.478 1.00 54.13 O
ATOM 11 C2' A B 568 8.758 95.367 129.536 1.00 52.03 C
ATOM 12 O2' A B 568 9.618 96.419 129.160 1.00 54.95 O
ATOM 13 C1' A B 568 9.382 94.609 130.709 1.00 51.36 C
ATOM 14 N9 A B 568 9.040 93.193 130.684 1.00 51.36 N
ATOM 15 C8 A B 568 7.818 92.610 130.911 1.00 51.87 C
ATOM 16 N7 A B 568 7.820 91.309 130.761 1.00 52.75 N
ATOM 17 C5 A B 568 9.133 91.014 130.424 1.00 51.46 C
ATOM 18 C6 A B 568 9.784 89.809 130.125 1.00 50.26 C
ATOM 19 N6 A B 568 9.175 88.624 130.103 1.00 50.61 N
ATOM 20 N1 A B 568 11.100 89.863 129.839 1.00 50.78 N
ATOM 21 C2 A B 568 11.713 91.051 129.848 1.00 51.10 C
ATOM 22 N3 A B 568 11.210 92.252 130.105 1.00 52.15 N
ATOM 23 C4 A B 568 9.899 92.164 130.389 1.00 52.12 C
ATOM 24 P G B 569 5.518 97.082 128.882 1.00 56.73 P
ATOM 25 OP1 G B 569 5.452 98.241 127.954 1.00 58.03 O
ATOM 26 OP2 G B 569 4.571 97.003 130.020 1.00 57.78 O
ATOM 27 O5' G B 569 5.364 95.752 128.013 1.00 57.06 O
TER
Atoms:
OP1: (2.719,80.657,135.888)
OP2: (1.079,82.641,135.811)
C3': (5.759,84.370,134.482)
C1': (4.950,85.649,132.683)
C5': (4.393,82.285,133.875)
O6: (1.196,89.964,134.475)
O4': (4.500,84.309,132.524)
C8: (2.685,86.015,133.766)
C2: (4.359,89.945,132.856)
C6: (2.213,89.496,133.952)
C5: (2.572,88.139,133.784)
C4: (3.773,87.836,133.185)
P: (2.131,81.809,135.158)
C4': (5.261,83.431,133.401)
C2': (6.113,85.611,133.674)
O2': (7.324,85.493,132.951)
N1: (3.187,90.348,133.443)
N2: (5.174,90.920,132.427)
N3: (4.708,88.680,132.701)
N7: (1.896,86.984,134.142)
N9: (3.845,86.461,133.185)
O5': (3.318,82.772,134.708)
O3': (6.843,83.833,135.231)
OP2: (1.079,82.641,135.811)
C3': (5.759,84.370,134.482)
C1': (4.950,85.649,132.683)
C5': (4.393,82.285,133.875)
O6: (1.196,89.964,134.475)
O4': (4.500,84.309,132.524)
C8: (2.685,86.015,133.766)
C2: (4.359,89.945,132.856)
C6: (2.213,89.496,133.952)
C5: (2.572,88.139,133.784)
C4: (3.773,87.836,133.185)
P: (2.131,81.809,135.158)
C4': (5.261,83.431,133.401)
C2': (6.113,85.611,133.674)
O2': (7.324,85.493,132.951)
N1: (3.187,90.348,133.443)
N2: (5.174,90.920,132.427)
N3: (4.708,88.680,132.701)
N7: (1.896,86.984,134.142)
N9: (3.845,86.461,133.185)
O5': (3.318,82.772,134.708)
O3': (6.843,83.833,135.231)
OP1: (4.532,95.586,134.393)
OP2: (4.551,93.173,133.511)
C3': (7.464,95.867,130.156)
C1': (9.382,94.609,130.709)
C5': (6.800,96.166,132.620)
O4': (8.871,95.169,131.900)
C8: (7.818,92.610,130.911)
O2': (9.618,96.419,129.160)
C6: (9.784,89.809,130.125)
C5: (9.133,91.014,130.424)
C4: (9.899,92.164,130.389)
P: (5.285,94.405,133.898)
C4': (7.895,96.192,131.577)
C2': (8.758,95.367,129.536)
C2: (11.713,91.051,129.848)
N1: (11.100,89.863,129.839)
N3: (11.210,92.252,130.105)
N6: (9.175,88.624,130.103)
N7: (7.820,91.309,130.761)
N9: (9.040,93.193,130.684)
O5': (6.170,94.864,132.654)
O3': (7.009,97.028,129.478)
OP2: (4.551,93.173,133.511)
C3': (7.464,95.867,130.156)
C1': (9.382,94.609,130.709)
C5': (6.800,96.166,132.620)
O4': (8.871,95.169,131.900)
C8: (7.818,92.610,130.911)
O2': (9.618,96.419,129.160)
C6: (9.784,89.809,130.125)
C5: (9.133,91.014,130.424)
C4: (9.899,92.164,130.389)
P: (5.285,94.405,133.898)
C4': (7.895,96.192,131.577)
C2': (8.758,95.367,129.536)
C2: (11.713,91.051,129.848)
N1: (11.100,89.863,129.839)
N3: (11.210,92.252,130.105)
N6: (9.175,88.624,130.103)
N7: (7.820,91.309,130.761)
N9: (9.040,93.193,130.684)
O5': (6.170,94.864,132.654)
O3': (7.009,97.028,129.478)
Image (generated by PyMOL):