ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ4:01084:01083

Extra

PDB:
ATOM 1 O3' A A1083 38.577 95.413 119.493 1.00 39.94 O
ATOM 2 P U A1084 39.973 96.140 119.244 1.00 39.31 P
ATOM 3 OP1 U A1084 40.982 95.501 120.132 1.00 38.39 O
ATOM 4 OP2 U A1084 39.728 97.590 119.330 1.00 36.95 O
ATOM 5 O5' U A1084 40.309 95.821 117.723 1.00 39.57 O
ATOM 6 C5' U A1084 40.406 94.471 117.246 1.00 42.60 C
ATOM 7 C4' U A1084 40.419 94.467 115.739 1.00 46.20 C
ATOM 8 O4' U A1084 39.161 94.984 115.246 1.00 47.86 O
ATOM 9 C3' U A1084 41.472 95.378 115.139 1.00 48.42 C
ATOM 10 O3' U A1084 42.685 94.639 115.030 1.00 49.25 O
ATOM 11 C2' U A1084 40.883 95.732 113.777 1.00 48.66 C
ATOM 12 O2' U A1084 41.100 94.723 112.810 1.00 52.23 O
ATOM 13 C1' U A1084 39.386 95.763 114.087 1.00 48.16 C
ATOM 14 N1 U A1084 38.782 97.088 114.291 1.00 48.39 N
ATOM 15 C2 U A1084 38.345 97.778 113.172 1.00 49.06 C
ATOM 16 O2 U A1084 38.477 97.354 112.039 1.00 52.04 O
ATOM 17 N3 U A1084 37.746 98.985 113.430 1.00 47.79 N
ATOM 18 C4 U A1084 37.542 99.558 114.665 1.00 50.73 C
ATOM 19 O4 U A1084 36.970 100.649 114.745 1.00 53.25 O
ATOM 20 C5 U A1084 38.038 98.790 115.768 1.00 50.18 C
ATOM 21 C6 U A1084 38.630 97.616 115.548 1.00 48.45 C
ATOM 22 P C A1085 44.038 95.215 115.665 1.00 49.26 P
ATOM 23 OP1 C A1085 45.056 94.176 115.367 1.00 49.28 O
ATOM 24 OP2 C A1085 43.807 95.636 117.069 1.00 50.20 O
ATOM 25 O5' C A1085 44.335 96.532 114.818 1.00 48.86 O
TER

ATOM 1 O3' A B1082 36.458 100.788 120.977 1.00 49.64 O
ATOM 2 P A B1083 35.371 100.038 120.068 1.00 52.10 P
ATOM 3 OP1 A B1083 35.813 100.220 118.659 1.00 50.57 O
ATOM 4 OP2 A B1083 34.000 100.458 120.474 1.00 53.22 O
ATOM 5 O5' A B1083 35.524 98.509 120.475 1.00 49.20 O
ATOM 6 C5' A B1083 36.724 97.809 120.186 1.00 44.37 C
ATOM 7 C4' A B1083 36.427 96.385 119.818 1.00 41.34 C
ATOM 8 O4' A B1083 35.149 96.264 119.151 1.00 41.50 O
ATOM 9 C3' A B1083 37.438 95.876 118.822 1.00 41.86 C
ATOM 10 O3' A B1083 38.577 95.413 119.493 1.00 39.94 O
ATOM 11 C2' A B1083 36.667 94.815 118.065 1.00 41.90 C
ATOM 12 O2' A B1083 36.579 93.634 118.826 1.00 44.94 O
ATOM 13 C1' A B1083 35.292 95.478 117.976 1.00 41.76 C
ATOM 14 N9 A B1083 35.130 96.374 116.825 1.00 40.46 N
ATOM 15 C8 A B1083 34.785 97.706 116.873 1.00 40.02 C
ATOM 16 N7 A B1083 34.665 98.267 115.695 1.00 39.22 N
ATOM 17 C5 A B1083 34.955 97.243 114.810 1.00 37.73 C
ATOM 18 C6 A B1083 34.982 97.196 113.414 1.00 37.03 C
ATOM 19 N6 A B1083 34.691 98.242 112.635 1.00 35.92 N
ATOM 20 N1 A B1083 35.318 96.025 112.834 1.00 37.70 N
ATOM 21 C2 A B1083 35.601 94.980 113.616 1.00 37.55 C
ATOM 22 N3 A B1083 35.599 94.897 114.944 1.00 39.95 N
ATOM 23 C4 A B1083 35.260 96.075 115.489 1.00 39.38 C
ATOM 24 P U B1084 39.973 96.140 119.244 1.00 39.31 P
ATOM 25 OP1 U B1084 40.982 95.501 120.132 1.00 38.39 O
ATOM 26 OP2 U B1084 39.728 97.590 119.330 1.00 36.95 O
ATOM 27 O5' U B1084 40.309 95.821 117.723 1.00 39.57 O
TER

Atoms:
C4: (37.542,99.558,114.665)
N3: (37.746,98.985,113.430)
OP1: (40.982,95.501,120.132)
OP2: (39.728,97.590,119.330)
C2: (38.345,97.778,113.172)
C1': (39.386,95.763,114.087)
C3': (41.472,95.378,115.139)
O5': (40.309,95.821,117.723)
O4': (39.161,94.984,115.246)
C5': (40.406,94.471,117.246)
P: (39.973,96.140,119.244)
C4': (40.419,94.467,115.739)
C2': (40.883,95.732,113.777)
O2': (41.100,94.723,112.810)
N1: (38.782,97.088,114.291)
O4: (36.970,100.649,114.745)
O2: (38.477,97.354,112.039)
C6: (38.630,97.616,115.548)
C5: (38.038,98.790,115.768)
O3': (42.685,94.639,115.030)
OP1: (35.813,100.220,118.659)
OP2: (34.000,100.458,120.474)
C3': (37.438,95.876,118.822)
C1': (35.292,95.478,117.976)
C5': (36.724,97.809,120.186)
O4': (35.149,96.264,119.151)
C8: (34.785,97.706,116.873)
O2': (36.579,93.634,118.826)
C6: (34.982,97.196,113.414)
C5: (34.955,97.243,114.810)
C4: (35.260,96.075,115.489)
P: (35.371,100.038,120.068)
C4': (36.427,96.385,119.818)
C2': (36.667,94.815,118.065)
C2: (35.601,94.980,113.616)
N1: (35.318,96.025,112.834)
N3: (35.599,94.897,114.944)
N6: (34.691,98.242,112.635)
N7: (34.665,98.267,115.695)
N9: (35.130,96.374,116.825)
O5': (35.524,98.509,120.475)
O3': (38.577,95.413,119.493)
Image (generated by PyMOL):
PyMOL image
show in jmol