Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OXD:B78:B8
Extra
PDB:
ATOM 1 O3' G A 77 -19.465 -30.276 26.633 1.00 63.34 O
ATOM 2 P G A 78 -19.915 -30.572 25.125 1.00 62.42 P
ATOM 3 OP1 G A 78 -20.103 -29.262 24.460 1.00 62.49 O
ATOM 4 OP2 G A 78 -21.011 -31.571 25.125 1.00 61.79 O
ATOM 5 O5' G A 78 -18.627 -31.298 24.517 1.00 61.54 O
ATOM 6 C5' G A 78 -17.358 -30.654 24.488 1.00 59.95 C
ATOM 7 C4' G A 78 -16.251 -31.671 24.299 1.00 58.39 C
ATOM 8 O4' G A 78 -16.322 -32.677 25.335 1.00 57.88 O
ATOM 9 C3' G A 78 -16.330 -32.509 23.038 1.00 57.79 C
ATOM 10 O3' G A 78 -15.914 -31.760 21.909 1.00 58.29 O
ATOM 11 C2' G A 78 -15.376 -33.633 23.417 1.00 56.81 C
ATOM 12 O2' G A 78 -14.031 -33.210 23.480 1.00 56.60 O
ATOM 13 C1' G A 78 -15.847 -33.914 24.836 1.00 56.77 C
ATOM 14 N9 G A 78 -16.916 -34.905 24.967 1.00 56.49 N
ATOM 15 C8 G A 78 -18.242 -34.632 25.185 1.00 56.76 C
ATOM 16 N7 G A 78 -18.985 -35.695 25.275 1.00 57.02 N
ATOM 17 C5 G A 78 -18.098 -36.746 25.112 1.00 56.53 C
ATOM 18 C6 G A 78 -18.343 -38.139 25.116 1.00 56.73 C
ATOM 19 O6 G A 78 -19.431 -38.708 25.270 1.00 58.18 O
ATOM 20 N1 G A 78 -17.182 -38.885 24.915 1.00 55.55 N
ATOM 21 C2 G A 78 -15.937 -38.334 24.734 1.00 55.08 C
ATOM 22 N2 G A 78 -14.932 -39.204 24.555 1.00 55.08 N
ATOM 23 N3 G A 78 -15.695 -37.026 24.728 1.00 55.09 N
ATOM 24 C4 G A 78 -16.816 -36.284 24.923 1.00 55.93 C
ATOM 25 P A A 79 -17.020 -31.319 20.835 1.00 59.15 P
ATOM 26 OP1 A A 79 -17.745 -30.140 21.365 1.00 59.35 O
ATOM 27 OP2 A A 79 -17.794 -32.529 20.467 1.00 58.97 O
ATOM 28 O5' A A 79 -16.126 -30.881 19.578 1.00 58.43 O
TER
ATOM 1 O3' G B 7 -13.590 -42.258 22.447 1.00 57.78 O
ATOM 2 P A B 8 -13.579 -42.888 23.921 1.00 58.20 P
ATOM 3 OP1 A B 8 -14.200 -44.226 23.838 1.00 58.16 O
ATOM 4 OP2 A B 8 -14.108 -41.871 24.860 1.00 58.83 O
ATOM 5 O5' A B 8 -12.029 -43.057 24.275 1.00 57.87 O
ATOM 6 C5' A B 8 -11.126 -43.664 23.355 1.00 58.42 C
ATOM 7 C4' A B 8 -9.863 -42.841 23.163 1.00 58.15 C
ATOM 8 O4' A B 8 -10.200 -41.586 22.527 1.00 58.23 O
ATOM 9 C3' A B 8 -9.141 -42.449 24.444 1.00 58.48 C
ATOM 10 O3' A B 8 -8.220 -43.454 24.825 1.00 58.88 O
ATOM 11 C2' A B 8 -8.423 -41.166 24.055 1.00 58.42 C
ATOM 12 O2' A B 8 -7.170 -41.413 23.450 1.00 58.38 O
ATOM 13 C1' A B 8 -9.390 -40.548 23.051 1.00 58.71 C
ATOM 14 N9 A B 8 -10.250 -39.515 23.630 1.00 59.14 N
ATOM 15 C8 A B 8 -11.574 -39.635 23.952 1.00 59.85 C
ATOM 16 N7 A B 8 -12.104 -38.545 24.455 1.00 60.28 N
ATOM 17 C5 A B 8 -11.052 -37.644 24.464 1.00 59.80 C
ATOM 18 C6 A B 8 -10.957 -36.298 24.877 1.00 59.60 C
ATOM 19 N6 A B 8 -11.985 -35.613 25.382 1.00 59.56 N
ATOM 20 N1 A B 8 -9.761 -35.685 24.752 1.00 59.36 N
ATOM 21 C2 A B 8 -8.729 -36.370 24.240 1.00 59.17 C
ATOM 22 N3 A B 8 -8.699 -37.635 23.819 1.00 59.04 N
ATOM 23 C4 A B 8 -9.900 -38.225 23.959 1.00 59.19 C
ATOM 24 P G B 9 -7.919 -43.711 26.374 1.00 59.87 P
ATOM 25 OP1 G B 9 -7.265 -45.035 26.496 1.00 59.93 O
ATOM 26 OP2 G B 9 -9.135 -43.414 27.173 1.00 59.87 O
ATOM 27 O5' G B 9 -6.860 -42.567 26.701 1.00 60.21 O
TER
ATOM 2 P G A 78 -19.915 -30.572 25.125 1.00 62.42 P
ATOM 3 OP1 G A 78 -20.103 -29.262 24.460 1.00 62.49 O
ATOM 4 OP2 G A 78 -21.011 -31.571 25.125 1.00 61.79 O
ATOM 5 O5' G A 78 -18.627 -31.298 24.517 1.00 61.54 O
ATOM 6 C5' G A 78 -17.358 -30.654 24.488 1.00 59.95 C
ATOM 7 C4' G A 78 -16.251 -31.671 24.299 1.00 58.39 C
ATOM 8 O4' G A 78 -16.322 -32.677 25.335 1.00 57.88 O
ATOM 9 C3' G A 78 -16.330 -32.509 23.038 1.00 57.79 C
ATOM 10 O3' G A 78 -15.914 -31.760 21.909 1.00 58.29 O
ATOM 11 C2' G A 78 -15.376 -33.633 23.417 1.00 56.81 C
ATOM 12 O2' G A 78 -14.031 -33.210 23.480 1.00 56.60 O
ATOM 13 C1' G A 78 -15.847 -33.914 24.836 1.00 56.77 C
ATOM 14 N9 G A 78 -16.916 -34.905 24.967 1.00 56.49 N
ATOM 15 C8 G A 78 -18.242 -34.632 25.185 1.00 56.76 C
ATOM 16 N7 G A 78 -18.985 -35.695 25.275 1.00 57.02 N
ATOM 17 C5 G A 78 -18.098 -36.746 25.112 1.00 56.53 C
ATOM 18 C6 G A 78 -18.343 -38.139 25.116 1.00 56.73 C
ATOM 19 O6 G A 78 -19.431 -38.708 25.270 1.00 58.18 O
ATOM 20 N1 G A 78 -17.182 -38.885 24.915 1.00 55.55 N
ATOM 21 C2 G A 78 -15.937 -38.334 24.734 1.00 55.08 C
ATOM 22 N2 G A 78 -14.932 -39.204 24.555 1.00 55.08 N
ATOM 23 N3 G A 78 -15.695 -37.026 24.728 1.00 55.09 N
ATOM 24 C4 G A 78 -16.816 -36.284 24.923 1.00 55.93 C
ATOM 25 P A A 79 -17.020 -31.319 20.835 1.00 59.15 P
ATOM 26 OP1 A A 79 -17.745 -30.140 21.365 1.00 59.35 O
ATOM 27 OP2 A A 79 -17.794 -32.529 20.467 1.00 58.97 O
ATOM 28 O5' A A 79 -16.126 -30.881 19.578 1.00 58.43 O
TER
ATOM 1 O3' G B 7 -13.590 -42.258 22.447 1.00 57.78 O
ATOM 2 P A B 8 -13.579 -42.888 23.921 1.00 58.20 P
ATOM 3 OP1 A B 8 -14.200 -44.226 23.838 1.00 58.16 O
ATOM 4 OP2 A B 8 -14.108 -41.871 24.860 1.00 58.83 O
ATOM 5 O5' A B 8 -12.029 -43.057 24.275 1.00 57.87 O
ATOM 6 C5' A B 8 -11.126 -43.664 23.355 1.00 58.42 C
ATOM 7 C4' A B 8 -9.863 -42.841 23.163 1.00 58.15 C
ATOM 8 O4' A B 8 -10.200 -41.586 22.527 1.00 58.23 O
ATOM 9 C3' A B 8 -9.141 -42.449 24.444 1.00 58.48 C
ATOM 10 O3' A B 8 -8.220 -43.454 24.825 1.00 58.88 O
ATOM 11 C2' A B 8 -8.423 -41.166 24.055 1.00 58.42 C
ATOM 12 O2' A B 8 -7.170 -41.413 23.450 1.00 58.38 O
ATOM 13 C1' A B 8 -9.390 -40.548 23.051 1.00 58.71 C
ATOM 14 N9 A B 8 -10.250 -39.515 23.630 1.00 59.14 N
ATOM 15 C8 A B 8 -11.574 -39.635 23.952 1.00 59.85 C
ATOM 16 N7 A B 8 -12.104 -38.545 24.455 1.00 60.28 N
ATOM 17 C5 A B 8 -11.052 -37.644 24.464 1.00 59.80 C
ATOM 18 C6 A B 8 -10.957 -36.298 24.877 1.00 59.60 C
ATOM 19 N6 A B 8 -11.985 -35.613 25.382 1.00 59.56 N
ATOM 20 N1 A B 8 -9.761 -35.685 24.752 1.00 59.36 N
ATOM 21 C2 A B 8 -8.729 -36.370 24.240 1.00 59.17 C
ATOM 22 N3 A B 8 -8.699 -37.635 23.819 1.00 59.04 N
ATOM 23 C4 A B 8 -9.900 -38.225 23.959 1.00 59.19 C
ATOM 24 P G B 9 -7.919 -43.711 26.374 1.00 59.87 P
ATOM 25 OP1 G B 9 -7.265 -45.035 26.496 1.00 59.93 O
ATOM 26 OP2 G B 9 -9.135 -43.414 27.173 1.00 59.87 O
ATOM 27 O5' G B 9 -6.860 -42.567 26.701 1.00 60.21 O
TER
Atoms:
OP1: (-20.103,-29.262,24.460)
OP2: (-21.011,-31.571,25.125)
C3': (-16.330,-32.509,23.038)
C1': (-15.847,-33.914,24.836)
C5': (-17.358,-30.654,24.488)
O6: (-19.431,-38.708,25.270)
O4': (-16.322,-32.677,25.335)
C8: (-18.242,-34.632,25.185)
C2: (-15.937,-38.334,24.734)
C6: (-18.343,-38.139,25.116)
C5: (-18.098,-36.746,25.112)
C4: (-16.816,-36.284,24.923)
P: (-19.915,-30.572,25.125)
C4': (-16.251,-31.671,24.299)
C2': (-15.376,-33.633,23.417)
O2': (-14.031,-33.210,23.480)
N1: (-17.182,-38.885,24.915)
N2: (-14.932,-39.204,24.555)
N3: (-15.695,-37.026,24.728)
N7: (-18.985,-35.695,25.275)
N9: (-16.916,-34.905,24.967)
O5': (-18.627,-31.298,24.517)
O3': (-15.914,-31.760,21.909)
OP2: (-21.011,-31.571,25.125)
C3': (-16.330,-32.509,23.038)
C1': (-15.847,-33.914,24.836)
C5': (-17.358,-30.654,24.488)
O6: (-19.431,-38.708,25.270)
O4': (-16.322,-32.677,25.335)
C8: (-18.242,-34.632,25.185)
C2: (-15.937,-38.334,24.734)
C6: (-18.343,-38.139,25.116)
C5: (-18.098,-36.746,25.112)
C4: (-16.816,-36.284,24.923)
P: (-19.915,-30.572,25.125)
C4': (-16.251,-31.671,24.299)
C2': (-15.376,-33.633,23.417)
O2': (-14.031,-33.210,23.480)
N1: (-17.182,-38.885,24.915)
N2: (-14.932,-39.204,24.555)
N3: (-15.695,-37.026,24.728)
N7: (-18.985,-35.695,25.275)
N9: (-16.916,-34.905,24.967)
O5': (-18.627,-31.298,24.517)
O3': (-15.914,-31.760,21.909)
OP1: (-14.200,-44.226,23.838)
OP2: (-14.108,-41.871,24.860)
C3': (-9.141,-42.449,24.444)
C1': (-9.390,-40.548,23.051)
C5': (-11.126,-43.664,23.355)
O4': (-10.200,-41.586,22.527)
C8: (-11.574,-39.635,23.952)
O2': (-7.170,-41.413,23.450)
C6: (-10.957,-36.298,24.877)
C5: (-11.052,-37.644,24.464)
C4: (-9.900,-38.225,23.959)
P: (-13.579,-42.888,23.921)
C4': (-9.863,-42.841,23.163)
C2': (-8.423,-41.166,24.055)
C2: (-8.729,-36.370,24.240)
N1: (-9.761,-35.685,24.752)
N3: (-8.699,-37.635,23.819)
N6: (-11.985,-35.613,25.382)
N7: (-12.104,-38.545,24.455)
N9: (-10.250,-39.515,23.630)
O5': (-12.029,-43.057,24.275)
O3': (-8.220,-43.454,24.825)
OP2: (-14.108,-41.871,24.860)
C3': (-9.141,-42.449,24.444)
C1': (-9.390,-40.548,23.051)
C5': (-11.126,-43.664,23.355)
O4': (-10.200,-41.586,22.527)
C8: (-11.574,-39.635,23.952)
O2': (-7.170,-41.413,23.450)
C6: (-10.957,-36.298,24.877)
C5: (-11.052,-37.644,24.464)
C4: (-9.900,-38.225,23.959)
P: (-13.579,-42.888,23.921)
C4': (-9.863,-42.841,23.163)
C2': (-8.423,-41.166,24.055)
C2: (-8.729,-36.370,24.240)
N1: (-9.761,-35.685,24.752)
N3: (-8.699,-37.635,23.819)
N6: (-11.985,-35.613,25.382)
N7: (-12.104,-38.545,24.455)
N9: (-10.250,-39.515,23.630)
O5': (-12.029,-43.057,24.275)
O3': (-8.220,-43.454,24.825)
Image (generated by PyMOL):