ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:02531:02541

Extra

PDB:
ATOM 1 O3' A A2530 76.367 138.156 169.075 1.00 71.46 O
ATOM 2 P G A2531 77.250 139.227 169.877 1.00 70.57 P
ATOM 3 OP1 G A2531 77.054 138.987 171.327 1.00 71.85 O
ATOM 4 OP2 G A2531 76.981 140.580 169.318 1.00 70.76 O
ATOM 5 O5' G A2531 78.733 138.795 169.489 1.00 69.96 O
ATOM 6 C5' G A2531 79.407 137.748 170.209 1.00 69.62 C
ATOM 7 C4' G A2531 78.940 136.389 169.738 1.00 69.72 C
ATOM 8 O4' G A2531 79.195 136.251 168.309 1.00 69.13 O
ATOM 9 C3' G A2531 79.657 135.209 170.400 1.00 70.85 C
ATOM 10 O3' G A2531 78.764 134.101 170.515 1.00 70.40 O
ATOM 11 C2' G A2531 80.735 134.879 169.380 1.00 71.55 C
ATOM 12 O2' G A2531 81.269 133.573 169.484 1.00 71.56 O
ATOM 13 C1' G A2531 79.945 135.075 168.094 1.00 72.73 C
ATOM 14 N9 G A2531 80.746 135.200 166.881 1.00 76.08 N
ATOM 15 C8 G A2531 81.891 135.937 166.692 1.00 77.05 C
ATOM 16 N7 G A2531 82.407 135.784 165.502 1.00 78.28 N
ATOM 17 C5 G A2531 81.541 134.904 164.865 1.00 80.00 C
ATOM 18 C6 G A2531 81.582 134.357 163.555 1.00 81.42 C
ATOM 19 O6 G A2531 82.428 134.538 162.669 1.00 82.59 O
ATOM 20 N1 G A2531 80.498 133.514 163.320 1.00 81.46 N
ATOM 21 C2 G A2531 79.506 133.230 164.228 1.00 80.00 C
ATOM 22 N2 G A2531 78.542 132.397 163.815 1.00 80.32 N
ATOM 23 N3 G A2531 79.462 133.725 165.450 1.00 79.05 N
ATOM 24 C4 G A2531 80.503 134.548 165.699 1.00 78.55 C
ATOM 25 P U A2532 79.194 132.804 171.369 1.00 71.47 P
ATOM 26 OP1 U A2532 79.975 133.260 172.551 1.00 71.43 O
ATOM 27 OP2 U A2532 79.783 131.791 170.458 1.00 70.47 O
ATOM 28 O5' U A2532 77.797 132.231 171.870 1.00 69.61 O
TER

ATOM 1 O3' G B2540 77.626 129.696 160.410 1.00 64.18 O
ATOM 2 P A B2541 76.948 131.153 160.392 1.00 64.05 P
ATOM 3 OP1 A B2541 76.314 131.338 159.063 1.00 64.58 O
ATOM 4 OP2 A B2541 77.937 132.150 160.875 1.00 64.96 O
ATOM 5 O5' A B2541 75.802 131.034 161.487 1.00 62.61 O
ATOM 6 C5' A B2541 74.445 131.341 161.168 1.00 61.44 C
ATOM 7 C4' A B2541 73.687 130.073 160.887 1.00 61.37 C
ATOM 8 O4' A B2541 73.965 129.075 161.907 1.00 61.70 O
ATOM 9 C3' A B2541 72.178 130.228 160.871 1.00 61.45 C
ATOM 10 O3' A B2541 71.715 130.650 159.597 1.00 61.02 O
ATOM 11 C2' A B2541 71.711 128.842 161.285 1.00 62.24 C
ATOM 12 O2' A B2541 71.831 127.908 160.235 1.00 63.19 O
ATOM 13 C1' A B2541 72.746 128.509 162.363 1.00 63.16 C
ATOM 14 N9 A B2541 72.427 129.111 163.665 1.00 64.01 N
ATOM 15 C8 A B2541 73.220 129.956 164.405 1.00 64.61 C
ATOM 16 N7 A B2541 72.667 130.359 165.521 1.00 65.56 N
ATOM 17 C5 A B2541 71.427 129.737 165.523 1.00 64.74 C
ATOM 18 C6 A B2541 70.356 129.766 166.436 1.00 65.23 C
ATOM 19 N6 A B2541 70.362 130.480 167.565 1.00 65.53 N
ATOM 20 N1 A B2541 69.263 129.031 166.144 1.00 65.57 N
ATOM 21 C2 A B2541 69.255 128.321 165.010 1.00 64.96 C
ATOM 22 N3 A B2541 70.195 128.216 164.073 1.00 64.30 N
ATOM 23 C4 A B2541 71.268 128.958 164.392 1.00 63.84 C
ATOM 24 P A B2542 70.721 131.908 159.489 1.00 62.38 P
ATOM 25 OP1 A B2542 70.498 132.189 158.050 1.00 62.50 O
ATOM 26 OP2 A B2542 71.230 132.990 160.372 1.00 62.38 O
ATOM 27 O5' A B2542 69.353 131.365 160.098 1.00 61.80 O
TER

Atoms:
OP1: (77.054,138.987,171.327)
OP2: (76.981,140.580,169.318)
C3': (79.657,135.209,170.400)
C1': (79.945,135.075,168.094)
C5': (79.407,137.748,170.209)
O6: (82.428,134.538,162.669)
O4': (79.195,136.251,168.309)
C8: (81.891,135.937,166.692)
C2: (79.506,133.230,164.228)
C6: (81.582,134.357,163.555)
C5: (81.541,134.904,164.865)
C4: (80.503,134.548,165.699)
P: (77.250,139.227,169.877)
C4': (78.940,136.389,169.738)
C2': (80.735,134.879,169.380)
O2': (81.269,133.573,169.484)
N1: (80.498,133.514,163.320)
N2: (78.542,132.397,163.815)
N3: (79.462,133.725,165.450)
N7: (82.407,135.784,165.502)
N9: (80.746,135.200,166.881)
O5': (78.733,138.795,169.489)
O3': (78.764,134.101,170.515)
OP1: (76.314,131.338,159.063)
OP2: (77.937,132.150,160.875)
C3': (72.178,130.228,160.871)
C1': (72.746,128.509,162.363)
C5': (74.445,131.341,161.168)
O4': (73.965,129.075,161.907)
C8: (73.220,129.956,164.405)
O2': (71.831,127.908,160.235)
C6: (70.356,129.766,166.436)
C5: (71.427,129.737,165.523)
C4: (71.268,128.958,164.392)
P: (76.948,131.153,160.392)
C4': (73.687,130.073,160.887)
C2': (71.711,128.842,161.285)
C2: (69.255,128.321,165.010)
N1: (69.263,129.031,166.144)
N3: (70.195,128.216,164.073)
N6: (70.362,130.480,167.565)
N7: (72.667,130.359,165.521)
N9: (72.427,129.111,163.665)
O5': (75.802,131.034,161.487)
O3': (71.715,130.650,159.597)
Image (generated by PyMOL):
PyMOL image
show in jmol