Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQL:0576:0557
Extra
PDB:
ATOM 1 O3' A A 575 -8.755 85.601 110.318 1.00 67.50 O
ATOM 2 P G A 576 -9.065 84.238 109.528 1.00 69.87 P
ATOM 3 OP1 G A 576 -10.513 83.954 109.670 1.00 73.28 O
ATOM 4 OP2 G A 576 -8.075 83.216 109.945 1.00 70.70 O
ATOM 5 O5' G A 576 -8.814 84.604 107.994 1.00 70.50 O
ATOM 6 C5' G A 576 -7.508 84.992 107.526 1.00 66.87 C
ATOM 7 C4' G A 576 -7.347 86.495 107.614 1.00 64.60 C
ATOM 8 O4' G A 576 -6.104 86.791 108.300 1.00 63.39 O
ATOM 9 C3' G A 576 -7.297 87.283 106.305 1.00 63.53 C
ATOM 10 O3' G A 576 -7.798 88.599 106.595 1.00 65.22 O
ATOM 11 C2' G A 576 -5.795 87.318 106.028 1.00 61.79 C
ATOM 12 O2' G A 576 -5.380 88.351 105.152 1.00 60.68 O
ATOM 13 C1' G A 576 -5.259 87.532 107.444 1.00 59.33 C
ATOM 14 N9 G A 576 -3.887 87.119 107.712 1.00 53.14 N
ATOM 15 C8 G A 576 -3.210 86.027 107.218 1.00 51.29 C
ATOM 16 N7 G A 576 -1.998 85.923 107.691 1.00 48.72 N
ATOM 17 C5 G A 576 -1.869 87.017 108.537 1.00 47.57 C
ATOM 18 C6 G A 576 -0.781 87.436 109.328 1.00 46.47 C
ATOM 19 O6 G A 576 0.327 86.915 109.440 1.00 46.80 O
ATOM 20 N1 G A 576 -1.079 88.594 110.039 1.00 46.03 N
ATOM 21 C2 G A 576 -2.274 89.265 109.991 1.00 46.71 C
ATOM 22 N2 G A 576 -2.380 90.356 110.768 1.00 46.48 N
ATOM 23 N3 G A 576 -3.292 88.892 109.244 1.00 47.11 N
ATOM 24 C4 G A 576 -3.023 87.765 108.552 1.00 48.83 C
ATOM 25 P U A 577 -8.081 89.653 105.409 1.00 65.74 P
ATOM 26 OP1 U A 577 -8.640 88.928 104.236 1.00 65.49 O
ATOM 27 OP2 U A 577 -6.874 90.494 105.238 1.00 67.84 O
ATOM 28 O5' U A 577 -9.206 90.602 106.021 1.00 65.41 O
TER
ATOM 1 O3' G B 556 0.342 93.392 112.496 1.00 52.24 O
ATOM 2 P A B 557 -0.115 92.161 113.427 1.00 55.50 P
ATOM 3 OP1 A B 557 0.515 92.370 114.757 1.00 55.56 O
ATOM 4 OP2 A B 557 0.098 90.873 112.710 1.00 51.16 O
ATOM 5 O5' A B 557 -1.682 92.396 113.555 1.00 55.47 O
ATOM 6 C5' A B 557 -2.279 92.739 114.810 1.00 56.01 C
ATOM 7 C4' A B 557 -2.214 94.228 115.033 1.00 56.33 C
ATOM 8 O4' A B 557 -2.745 94.942 113.885 1.00 55.82 O
ATOM 9 C3' A B 557 -3.079 94.682 116.185 1.00 57.44 C
ATOM 10 O3' A B 557 -2.442 94.467 117.432 1.00 60.08 O
ATOM 11 C2' A B 557 -3.358 96.138 115.841 1.00 56.95 C
ATOM 12 O2' A B 557 -2.306 97.021 116.164 1.00 58.65 O
ATOM 13 C1' A B 557 -3.530 96.046 114.323 1.00 55.50 C
ATOM 14 N9 A B 557 -4.921 95.780 113.948 1.00 55.22 N
ATOM 15 C8 A B 557 -5.405 94.698 113.245 1.00 55.39 C
ATOM 16 N7 A B 557 -6.707 94.706 113.095 1.00 56.28 N
ATOM 17 C5 A B 557 -7.109 95.872 113.735 1.00 54.17 C
ATOM 18 C6 A B 557 -8.371 96.448 113.931 1.00 54.70 C
ATOM 19 N6 A B 557 -9.506 95.899 113.492 1.00 55.38 N
ATOM 20 N1 A B 557 -8.431 97.620 114.603 1.00 56.49 N
ATOM 21 C2 A B 557 -7.287 98.165 115.045 1.00 53.98 C
ATOM 22 N3 A B 557 -6.040 97.715 114.924 1.00 54.14 N
ATOM 23 C4 A B 557 -6.020 96.550 114.252 1.00 53.38 C
ATOM 24 P C B 558 -3.325 94.045 118.704 1.00 62.18 P
ATOM 25 OP1 C B 558 -2.393 93.593 119.774 1.00 63.43 O
ATOM 26 OP2 C B 558 -4.403 93.131 118.234 1.00 61.69 O
ATOM 27 O5' C B 558 -3.973 95.425 119.162 1.00 60.55 O
TER
ATOM 2 P G A 576 -9.065 84.238 109.528 1.00 69.87 P
ATOM 3 OP1 G A 576 -10.513 83.954 109.670 1.00 73.28 O
ATOM 4 OP2 G A 576 -8.075 83.216 109.945 1.00 70.70 O
ATOM 5 O5' G A 576 -8.814 84.604 107.994 1.00 70.50 O
ATOM 6 C5' G A 576 -7.508 84.992 107.526 1.00 66.87 C
ATOM 7 C4' G A 576 -7.347 86.495 107.614 1.00 64.60 C
ATOM 8 O4' G A 576 -6.104 86.791 108.300 1.00 63.39 O
ATOM 9 C3' G A 576 -7.297 87.283 106.305 1.00 63.53 C
ATOM 10 O3' G A 576 -7.798 88.599 106.595 1.00 65.22 O
ATOM 11 C2' G A 576 -5.795 87.318 106.028 1.00 61.79 C
ATOM 12 O2' G A 576 -5.380 88.351 105.152 1.00 60.68 O
ATOM 13 C1' G A 576 -5.259 87.532 107.444 1.00 59.33 C
ATOM 14 N9 G A 576 -3.887 87.119 107.712 1.00 53.14 N
ATOM 15 C8 G A 576 -3.210 86.027 107.218 1.00 51.29 C
ATOM 16 N7 G A 576 -1.998 85.923 107.691 1.00 48.72 N
ATOM 17 C5 G A 576 -1.869 87.017 108.537 1.00 47.57 C
ATOM 18 C6 G A 576 -0.781 87.436 109.328 1.00 46.47 C
ATOM 19 O6 G A 576 0.327 86.915 109.440 1.00 46.80 O
ATOM 20 N1 G A 576 -1.079 88.594 110.039 1.00 46.03 N
ATOM 21 C2 G A 576 -2.274 89.265 109.991 1.00 46.71 C
ATOM 22 N2 G A 576 -2.380 90.356 110.768 1.00 46.48 N
ATOM 23 N3 G A 576 -3.292 88.892 109.244 1.00 47.11 N
ATOM 24 C4 G A 576 -3.023 87.765 108.552 1.00 48.83 C
ATOM 25 P U A 577 -8.081 89.653 105.409 1.00 65.74 P
ATOM 26 OP1 U A 577 -8.640 88.928 104.236 1.00 65.49 O
ATOM 27 OP2 U A 577 -6.874 90.494 105.238 1.00 67.84 O
ATOM 28 O5' U A 577 -9.206 90.602 106.021 1.00 65.41 O
TER
ATOM 1 O3' G B 556 0.342 93.392 112.496 1.00 52.24 O
ATOM 2 P A B 557 -0.115 92.161 113.427 1.00 55.50 P
ATOM 3 OP1 A B 557 0.515 92.370 114.757 1.00 55.56 O
ATOM 4 OP2 A B 557 0.098 90.873 112.710 1.00 51.16 O
ATOM 5 O5' A B 557 -1.682 92.396 113.555 1.00 55.47 O
ATOM 6 C5' A B 557 -2.279 92.739 114.810 1.00 56.01 C
ATOM 7 C4' A B 557 -2.214 94.228 115.033 1.00 56.33 C
ATOM 8 O4' A B 557 -2.745 94.942 113.885 1.00 55.82 O
ATOM 9 C3' A B 557 -3.079 94.682 116.185 1.00 57.44 C
ATOM 10 O3' A B 557 -2.442 94.467 117.432 1.00 60.08 O
ATOM 11 C2' A B 557 -3.358 96.138 115.841 1.00 56.95 C
ATOM 12 O2' A B 557 -2.306 97.021 116.164 1.00 58.65 O
ATOM 13 C1' A B 557 -3.530 96.046 114.323 1.00 55.50 C
ATOM 14 N9 A B 557 -4.921 95.780 113.948 1.00 55.22 N
ATOM 15 C8 A B 557 -5.405 94.698 113.245 1.00 55.39 C
ATOM 16 N7 A B 557 -6.707 94.706 113.095 1.00 56.28 N
ATOM 17 C5 A B 557 -7.109 95.872 113.735 1.00 54.17 C
ATOM 18 C6 A B 557 -8.371 96.448 113.931 1.00 54.70 C
ATOM 19 N6 A B 557 -9.506 95.899 113.492 1.00 55.38 N
ATOM 20 N1 A B 557 -8.431 97.620 114.603 1.00 56.49 N
ATOM 21 C2 A B 557 -7.287 98.165 115.045 1.00 53.98 C
ATOM 22 N3 A B 557 -6.040 97.715 114.924 1.00 54.14 N
ATOM 23 C4 A B 557 -6.020 96.550 114.252 1.00 53.38 C
ATOM 24 P C B 558 -3.325 94.045 118.704 1.00 62.18 P
ATOM 25 OP1 C B 558 -2.393 93.593 119.774 1.00 63.43 O
ATOM 26 OP2 C B 558 -4.403 93.131 118.234 1.00 61.69 O
ATOM 27 O5' C B 558 -3.973 95.425 119.162 1.00 60.55 O
TER
Atoms:
OP1: (-10.513,83.954,109.670)
OP2: (-8.075,83.216,109.945)
C3': (-7.297,87.283,106.305)
C1': (-5.259,87.532,107.444)
C5': (-7.508,84.992,107.526)
O6: (0.327,86.915,109.440)
O4': (-6.104,86.791,108.300)
C8: (-3.210,86.027,107.218)
C2: (-2.274,89.265,109.991)
C6: (-0.781,87.436,109.328)
C5: (-1.869,87.017,108.537)
C4: (-3.023,87.765,108.552)
P: (-9.065,84.238,109.528)
C4': (-7.347,86.495,107.614)
C2': (-5.795,87.318,106.028)
O2': (-5.380,88.351,105.152)
N1: (-1.079,88.594,110.039)
N2: (-2.380,90.356,110.768)
N3: (-3.292,88.892,109.244)
N7: (-1.998,85.923,107.691)
N9: (-3.887,87.119,107.712)
O5': (-8.814,84.604,107.994)
O3': (-7.798,88.599,106.595)
OP2: (-8.075,83.216,109.945)
C3': (-7.297,87.283,106.305)
C1': (-5.259,87.532,107.444)
C5': (-7.508,84.992,107.526)
O6: (0.327,86.915,109.440)
O4': (-6.104,86.791,108.300)
C8: (-3.210,86.027,107.218)
C2: (-2.274,89.265,109.991)
C6: (-0.781,87.436,109.328)
C5: (-1.869,87.017,108.537)
C4: (-3.023,87.765,108.552)
P: (-9.065,84.238,109.528)
C4': (-7.347,86.495,107.614)
C2': (-5.795,87.318,106.028)
O2': (-5.380,88.351,105.152)
N1: (-1.079,88.594,110.039)
N2: (-2.380,90.356,110.768)
N3: (-3.292,88.892,109.244)
N7: (-1.998,85.923,107.691)
N9: (-3.887,87.119,107.712)
O5': (-8.814,84.604,107.994)
O3': (-7.798,88.599,106.595)
OP1: (0.515,92.370,114.757)
OP2: (0.098,90.873,112.710)
C3': (-3.079,94.682,116.185)
C1': (-3.530,96.046,114.323)
C5': (-2.279,92.739,114.810)
O4': (-2.745,94.942,113.885)
C8: (-5.405,94.698,113.245)
O2': (-2.306,97.021,116.164)
C6: (-8.371,96.448,113.931)
C5: (-7.109,95.872,113.735)
C4: (-6.020,96.550,114.252)
P: (-0.115,92.161,113.427)
C4': (-2.214,94.228,115.033)
C2': (-3.358,96.138,115.841)
C2: (-7.287,98.165,115.045)
N1: (-8.431,97.620,114.603)
N3: (-6.040,97.715,114.924)
N6: (-9.506,95.899,113.492)
N7: (-6.707,94.706,113.095)
N9: (-4.921,95.780,113.948)
O5': (-1.682,92.396,113.555)
O3': (-2.442,94.467,117.432)
OP2: (0.098,90.873,112.710)
C3': (-3.079,94.682,116.185)
C1': (-3.530,96.046,114.323)
C5': (-2.279,92.739,114.810)
O4': (-2.745,94.942,113.885)
C8: (-5.405,94.698,113.245)
O2': (-2.306,97.021,116.164)
C6: (-8.371,96.448,113.931)
C5: (-7.109,95.872,113.735)
C4: (-6.020,96.550,114.252)
P: (-0.115,92.161,113.427)
C4': (-2.214,94.228,115.033)
C2': (-3.358,96.138,115.841)
C2: (-7.287,98.165,115.045)
N1: (-8.431,97.620,114.603)
N3: (-6.040,97.715,114.924)
N6: (-9.506,95.899,113.492)
N7: (-6.707,94.706,113.095)
N9: (-4.921,95.780,113.948)
O5': (-1.682,92.396,113.555)
O3': (-2.442,94.467,117.432)
Image (generated by PyMOL):