Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHY:A488:A489
Extra
PDB:
ATOM 1 O3' A A 487 101.958 39.954 53.860 1.00123.12 O
ATOM 2 P A A 488 102.928 40.719 54.880 1.00105.48 P
ATOM 3 OP1 A A 488 102.105 41.101 56.049 1.00127.48 O
ATOM 4 OP2 A A 488 103.613 41.783 54.111 1.00101.77 O
ATOM 5 O5' A A 488 103.979 39.596 55.301 1.00101.27 O
ATOM 6 C5' A A 488 104.608 39.642 56.578 1.00107.92 C
ATOM 7 C4' A A 488 105.121 38.288 57.012 1.00102.53 C
ATOM 8 O4' A A 488 104.009 37.388 57.270 1.00106.93 O
ATOM 9 C3' A A 488 105.977 37.545 56.000 1.00106.12 C
ATOM 10 O3' A A 488 107.322 37.999 55.972 1.00112.65 O
ATOM 11 C2' A A 488 105.820 36.089 56.429 1.00107.24 C
ATOM 12 O2' A A 488 106.656 35.794 57.539 1.00104.05 O
ATOM 13 C1' A A 488 104.363 36.066 56.901 1.00115.00 C
ATOM 14 N9 A A 488 103.433 35.599 55.841 1.00118.97 N
ATOM 15 C8 A A 488 103.276 36.062 54.549 1.00111.24 C
ATOM 16 N7 A A 488 102.353 35.436 53.853 1.00104.74 N
ATOM 17 C5 A A 488 101.865 34.491 54.743 1.00105.99 C
ATOM 18 C6 A A 488 100.873 33.509 54.623 1.00105.84 C
ATOM 19 N6 A A 488 100.162 33.309 53.517 1.00109.72 N
ATOM 20 N1 A A 488 100.630 32.725 55.689 1.00105.54 N
ATOM 21 C2 A A 488 101.342 32.923 56.799 1.00108.40 C
ATOM 22 N3 A A 488 102.301 33.812 57.039 1.00109.16 N
ATOM 23 C4 A A 488 102.518 34.575 55.960 1.00109.16 C
ATOM 24 P C A 489 107.650 39.520 55.568 1.00125.17 P
ATOM 25 OP1 C A 489 107.525 40.337 56.800 1.00112.92 O
ATOM 26 OP2 C A 489 106.803 39.857 54.400 1.00107.91 O
ATOM 27 O5' C A 489 109.167 39.446 55.129 1.00 97.74 O
TER
ATOM 1 O3' A B 488 107.322 37.999 55.972 1.00112.65 O
ATOM 2 P C B 489 107.650 39.520 55.568 1.00125.17 P
ATOM 3 OP1 C B 489 107.525 40.337 56.800 1.00112.92 O
ATOM 4 OP2 C B 489 106.803 39.857 54.400 1.00107.91 O
ATOM 5 O5' C B 489 109.167 39.446 55.129 1.00 97.74 O
ATOM 6 C5' C B 489 109.547 38.818 53.921 1.00 95.25 C
ATOM 7 C4' C B 489 110.982 38.399 53.979 1.00106.34 C
ATOM 8 O4' C B 489 111.095 37.184 54.777 1.00107.64 O
ATOM 9 C3' C B 489 111.656 38.094 52.637 1.00102.33 C
ATOM 10 O3' C B 489 113.031 38.488 52.732 1.00119.87 O
ATOM 11 C2' C B 489 111.571 36.566 52.589 1.00102.10 C
ATOM 12 O2' C B 489 112.491 35.943 51.718 1.00103.40 O
ATOM 13 C1' C B 489 111.852 36.239 54.049 1.00111.35 C
ATOM 14 N1 C B 489 111.479 34.869 54.489 1.00108.60 N
ATOM 15 C2 C B 489 112.430 34.200 55.272 1.00113.34 C
ATOM 16 O2 C B 489 113.503 34.776 55.530 1.00116.80 O
ATOM 17 N3 C B 489 112.178 32.952 55.737 1.00112.62 N
ATOM 18 C4 C B 489 111.028 32.356 55.451 1.00105.90 C
ATOM 19 N4 C B 489 110.833 31.128 55.933 1.00105.57 N
ATOM 20 C5 C B 489 110.040 33.007 54.659 1.00103.88 C
ATOM 21 C6 C B 489 110.298 34.249 54.207 1.00108.87 C
ATOM 22 P U B 490 113.856 39.000 51.446 1.00129.41 P
ATOM 23 OP1 U B 490 113.747 40.480 51.416 1.00132.19 O
ATOM 24 OP2 U B 490 113.373 38.225 50.276 1.00135.89 O
ATOM 25 O5' U B 490 115.355 38.569 51.802 1.00104.76 O
TER
ATOM 2 P A A 488 102.928 40.719 54.880 1.00105.48 P
ATOM 3 OP1 A A 488 102.105 41.101 56.049 1.00127.48 O
ATOM 4 OP2 A A 488 103.613 41.783 54.111 1.00101.77 O
ATOM 5 O5' A A 488 103.979 39.596 55.301 1.00101.27 O
ATOM 6 C5' A A 488 104.608 39.642 56.578 1.00107.92 C
ATOM 7 C4' A A 488 105.121 38.288 57.012 1.00102.53 C
ATOM 8 O4' A A 488 104.009 37.388 57.270 1.00106.93 O
ATOM 9 C3' A A 488 105.977 37.545 56.000 1.00106.12 C
ATOM 10 O3' A A 488 107.322 37.999 55.972 1.00112.65 O
ATOM 11 C2' A A 488 105.820 36.089 56.429 1.00107.24 C
ATOM 12 O2' A A 488 106.656 35.794 57.539 1.00104.05 O
ATOM 13 C1' A A 488 104.363 36.066 56.901 1.00115.00 C
ATOM 14 N9 A A 488 103.433 35.599 55.841 1.00118.97 N
ATOM 15 C8 A A 488 103.276 36.062 54.549 1.00111.24 C
ATOM 16 N7 A A 488 102.353 35.436 53.853 1.00104.74 N
ATOM 17 C5 A A 488 101.865 34.491 54.743 1.00105.99 C
ATOM 18 C6 A A 488 100.873 33.509 54.623 1.00105.84 C
ATOM 19 N6 A A 488 100.162 33.309 53.517 1.00109.72 N
ATOM 20 N1 A A 488 100.630 32.725 55.689 1.00105.54 N
ATOM 21 C2 A A 488 101.342 32.923 56.799 1.00108.40 C
ATOM 22 N3 A A 488 102.301 33.812 57.039 1.00109.16 N
ATOM 23 C4 A A 488 102.518 34.575 55.960 1.00109.16 C
ATOM 24 P C A 489 107.650 39.520 55.568 1.00125.17 P
ATOM 25 OP1 C A 489 107.525 40.337 56.800 1.00112.92 O
ATOM 26 OP2 C A 489 106.803 39.857 54.400 1.00107.91 O
ATOM 27 O5' C A 489 109.167 39.446 55.129 1.00 97.74 O
TER
ATOM 1 O3' A B 488 107.322 37.999 55.972 1.00112.65 O
ATOM 2 P C B 489 107.650 39.520 55.568 1.00125.17 P
ATOM 3 OP1 C B 489 107.525 40.337 56.800 1.00112.92 O
ATOM 4 OP2 C B 489 106.803 39.857 54.400 1.00107.91 O
ATOM 5 O5' C B 489 109.167 39.446 55.129 1.00 97.74 O
ATOM 6 C5' C B 489 109.547 38.818 53.921 1.00 95.25 C
ATOM 7 C4' C B 489 110.982 38.399 53.979 1.00106.34 C
ATOM 8 O4' C B 489 111.095 37.184 54.777 1.00107.64 O
ATOM 9 C3' C B 489 111.656 38.094 52.637 1.00102.33 C
ATOM 10 O3' C B 489 113.031 38.488 52.732 1.00119.87 O
ATOM 11 C2' C B 489 111.571 36.566 52.589 1.00102.10 C
ATOM 12 O2' C B 489 112.491 35.943 51.718 1.00103.40 O
ATOM 13 C1' C B 489 111.852 36.239 54.049 1.00111.35 C
ATOM 14 N1 C B 489 111.479 34.869 54.489 1.00108.60 N
ATOM 15 C2 C B 489 112.430 34.200 55.272 1.00113.34 C
ATOM 16 O2 C B 489 113.503 34.776 55.530 1.00116.80 O
ATOM 17 N3 C B 489 112.178 32.952 55.737 1.00112.62 N
ATOM 18 C4 C B 489 111.028 32.356 55.451 1.00105.90 C
ATOM 19 N4 C B 489 110.833 31.128 55.933 1.00105.57 N
ATOM 20 C5 C B 489 110.040 33.007 54.659 1.00103.88 C
ATOM 21 C6 C B 489 110.298 34.249 54.207 1.00108.87 C
ATOM 22 P U B 490 113.856 39.000 51.446 1.00129.41 P
ATOM 23 OP1 U B 490 113.747 40.480 51.416 1.00132.19 O
ATOM 24 OP2 U B 490 113.373 38.225 50.276 1.00135.89 O
ATOM 25 O5' U B 490 115.355 38.569 51.802 1.00104.76 O
TER
Atoms:
OP1: (102.105,41.101,56.049)
OP2: (103.613,41.783,54.111)
C3': (105.977,37.545,56.000)
C1': (104.363,36.066,56.901)
C5': (104.608,39.642,56.578)
O4': (104.009,37.388,57.270)
C8: (103.276,36.062,54.549)
O2': (106.656,35.794,57.539)
C6: (100.873,33.509,54.623)
C5: (101.865,34.491,54.743)
C4: (102.518,34.575,55.960)
P: (102.928,40.719,54.880)
C4': (105.121,38.288,57.012)
C2': (105.820,36.089,56.429)
C2: (101.342,32.923,56.799)
N1: (100.630,32.725,55.689)
N3: (102.301,33.812,57.039)
N6: (100.162,33.309,53.517)
N7: (102.353,35.436,53.853)
N9: (103.433,35.599,55.841)
O5': (103.979,39.596,55.301)
O3': (107.322,37.999,55.972)
OP2: (103.613,41.783,54.111)
C3': (105.977,37.545,56.000)
C1': (104.363,36.066,56.901)
C5': (104.608,39.642,56.578)
O4': (104.009,37.388,57.270)
C8: (103.276,36.062,54.549)
O2': (106.656,35.794,57.539)
C6: (100.873,33.509,54.623)
C5: (101.865,34.491,54.743)
C4: (102.518,34.575,55.960)
P: (102.928,40.719,54.880)
C4': (105.121,38.288,57.012)
C2': (105.820,36.089,56.429)
C2: (101.342,32.923,56.799)
N1: (100.630,32.725,55.689)
N3: (102.301,33.812,57.039)
N6: (100.162,33.309,53.517)
N7: (102.353,35.436,53.853)
N9: (103.433,35.599,55.841)
O5': (103.979,39.596,55.301)
O3': (107.322,37.999,55.972)
C2: (112.430,34.200,55.272)
OP1: (107.525,40.337,56.800)
OP2: (106.803,39.857,54.400)
C4: (111.028,32.356,55.451)
O5': (109.167,39.446,55.129)
C3': (111.656,38.094,52.637)
C1': (111.852,36.239,54.049)
O4': (111.095,37.184,54.777)
C5': (109.547,38.818,53.921)
P: (107.650,39.520,55.568)
O2: (113.503,34.776,55.530)
C4': (110.982,38.399,53.979)
C2': (111.571,36.566,52.589)
O2': (112.491,35.943,51.718)
N1: (111.479,34.869,54.489)
N3: (112.178,32.952,55.737)
N4: (110.833,31.128,55.933)
C6: (110.298,34.249,54.207)
C5: (110.040,33.007,54.659)
O3': (113.031,38.488,52.732)
OP1: (107.525,40.337,56.800)
OP2: (106.803,39.857,54.400)
C4: (111.028,32.356,55.451)
O5': (109.167,39.446,55.129)
C3': (111.656,38.094,52.637)
C1': (111.852,36.239,54.049)
O4': (111.095,37.184,54.777)
C5': (109.547,38.818,53.921)
P: (107.650,39.520,55.568)
O2: (113.503,34.776,55.530)
C4': (110.982,38.399,53.979)
C2': (111.571,36.566,52.589)
O2': (112.491,35.943,51.718)
N1: (111.479,34.869,54.489)
N3: (112.178,32.952,55.737)
N4: (110.833,31.128,55.933)
C6: (110.298,34.249,54.207)
C5: (110.040,33.007,54.659)
O3': (113.031,38.488,52.732)
Image (generated by PyMOL):