Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D0X:A23:A61
Extra
PDB:
ATOM 1 O3' A A 22 -3.264 15.479 2.026 1.00 44.88 O
ATOM 2 P G A 23 -4.448 14.990 2.986 1.00 52.08 P
ATOM 3 OP1 G A 23 -5.521 16.007 2.940 1.00 48.05 O
ATOM 4 OP2 G A 23 -3.882 14.588 4.294 1.00 49.90 O
ATOM 5 O5' G A 23 -4.917 13.649 2.255 1.00 47.93 O
ATOM 6 C5' G A 23 -6.028 13.631 1.372 1.00 52.58 C
ATOM 7 C4' G A 23 -5.738 14.308 0.047 1.00 46.97 C
ATOM 8 O4' G A 23 -4.719 13.584 -0.689 1.00 45.50 O
ATOM 9 C3' G A 23 -6.951 14.365 -0.875 1.00 51.43 C
ATOM 10 O3' G A 23 -6.944 15.579 -1.593 1.00 52.61 O
ATOM 11 C2' G A 23 -6.712 13.197 -1.814 1.00 46.92 C
ATOM 12 O2' G A 23 -7.352 13.378 -3.058 1.00 46.17 O
ATOM 13 C1' G A 23 -5.207 13.308 -1.987 1.00 48.14 C
ATOM 14 N9 G A 23 -4.632 12.067 -2.483 1.00 51.66 N
ATOM 15 C8 G A 23 -4.983 10.802 -2.079 1.00 53.46 C
ATOM 16 N7 G A 23 -4.318 9.862 -2.688 1.00 58.38 N
ATOM 17 C5 G A 23 -3.474 10.546 -3.553 1.00 53.40 C
ATOM 18 C6 G A 23 -2.520 10.045 -4.467 1.00 53.10 C
ATOM 19 O6 G A 23 -2.224 8.865 -4.699 1.00 57.39 O
ATOM 20 N1 G A 23 -1.876 11.070 -5.151 1.00 53.09 N
ATOM 21 C2 G A 23 -2.122 12.409 -4.973 1.00 51.34 C
ATOM 22 N2 G A 23 -1.390 13.236 -5.735 1.00 51.70 N
ATOM 23 N3 G A 23 -3.014 12.894 -4.116 1.00 48.27 N
ATOM 24 C4 G A 23 -3.654 11.907 -3.442 1.00 50.41 C
ATOM 25 P U A 24 -8.260 16.067 -2.347 1.00 47.13 P
ATOM 26 OP1 U A 24 -9.425 15.632 -1.546 1.00 48.68 O
ATOM 27 OP2 U A 24 -8.134 15.681 -3.772 1.00 40.79 O
ATOM 28 O5' U A 24 -8.125 17.658 -2.243 1.00 52.45 O
TER
ATOM 1 O3' G B 60 0.480 13.310 -9.365 1.00 47.88 O
ATOM 2 P A B 61 1.346 12.852 -8.100 1.00 53.82 P
ATOM 3 OP1 A B 61 2.745 12.742 -8.569 1.00 46.36 O
ATOM 4 OP2 A B 61 0.683 11.691 -7.471 1.00 51.90 O
ATOM 5 O5' A B 61 1.216 14.077 -7.075 1.00 54.22 O
ATOM 6 C5' A B 61 2.267 15.026 -6.876 1.00 50.65 C
ATOM 7 C4' A B 61 2.474 15.932 -8.077 1.00 47.74 C
ATOM 8 O4' A B 61 1.227 16.578 -8.436 1.00 50.36 O
ATOM 9 C3' A B 61 3.435 17.084 -7.837 1.00 48.06 C
ATOM 10 O3' A B 61 4.770 16.670 -8.058 1.00 47.22 O
ATOM 11 C2' A B 61 2.979 18.092 -8.886 1.00 46.41 C
ATOM 12 O2' A B 61 3.421 17.764 -10.189 1.00 40.05 O
ATOM 13 C1' A B 61 1.468 17.930 -8.777 1.00 45.42 C
ATOM 14 N9 A B 61 0.865 18.763 -7.744 1.00 44.38 N
ATOM 15 C8 A B 61 0.208 18.338 -6.623 1.00 46.22 C
ATOM 16 N7 A B 61 -0.238 19.313 -5.867 1.00 44.34 N
ATOM 17 C5 A B 61 0.154 20.456 -6.539 1.00 43.94 C
ATOM 18 C6 A B 61 -0.015 21.823 -6.256 1.00 44.50 C
ATOM 19 N6 A B 61 -0.652 22.278 -5.171 1.00 43.84 N
ATOM 20 N1 A B 61 0.501 22.707 -7.135 1.00 44.72 N
ATOM 21 C2 A B 61 1.138 22.248 -8.220 1.00 44.45 C
ATOM 22 N3 A B 61 1.359 20.989 -8.593 1.00 45.76 N
ATOM 23 C4 A B 61 0.836 20.136 -7.699 1.00 45.56 C
ATOM 24 P A B 62 5.843 16.916 -6.902 1.00 54.12 P
ATOM 25 OP1 A B 62 7.085 16.226 -7.311 1.00 45.31 O
ATOM 26 OP2 A B 62 5.191 16.610 -5.607 1.00 44.54 O
ATOM 27 O5' A B 62 6.093 18.498 -6.950 1.00 57.91 O
TER
ATOM 2 P G A 23 -4.448 14.990 2.986 1.00 52.08 P
ATOM 3 OP1 G A 23 -5.521 16.007 2.940 1.00 48.05 O
ATOM 4 OP2 G A 23 -3.882 14.588 4.294 1.00 49.90 O
ATOM 5 O5' G A 23 -4.917 13.649 2.255 1.00 47.93 O
ATOM 6 C5' G A 23 -6.028 13.631 1.372 1.00 52.58 C
ATOM 7 C4' G A 23 -5.738 14.308 0.047 1.00 46.97 C
ATOM 8 O4' G A 23 -4.719 13.584 -0.689 1.00 45.50 O
ATOM 9 C3' G A 23 -6.951 14.365 -0.875 1.00 51.43 C
ATOM 10 O3' G A 23 -6.944 15.579 -1.593 1.00 52.61 O
ATOM 11 C2' G A 23 -6.712 13.197 -1.814 1.00 46.92 C
ATOM 12 O2' G A 23 -7.352 13.378 -3.058 1.00 46.17 O
ATOM 13 C1' G A 23 -5.207 13.308 -1.987 1.00 48.14 C
ATOM 14 N9 G A 23 -4.632 12.067 -2.483 1.00 51.66 N
ATOM 15 C8 G A 23 -4.983 10.802 -2.079 1.00 53.46 C
ATOM 16 N7 G A 23 -4.318 9.862 -2.688 1.00 58.38 N
ATOM 17 C5 G A 23 -3.474 10.546 -3.553 1.00 53.40 C
ATOM 18 C6 G A 23 -2.520 10.045 -4.467 1.00 53.10 C
ATOM 19 O6 G A 23 -2.224 8.865 -4.699 1.00 57.39 O
ATOM 20 N1 G A 23 -1.876 11.070 -5.151 1.00 53.09 N
ATOM 21 C2 G A 23 -2.122 12.409 -4.973 1.00 51.34 C
ATOM 22 N2 G A 23 -1.390 13.236 -5.735 1.00 51.70 N
ATOM 23 N3 G A 23 -3.014 12.894 -4.116 1.00 48.27 N
ATOM 24 C4 G A 23 -3.654 11.907 -3.442 1.00 50.41 C
ATOM 25 P U A 24 -8.260 16.067 -2.347 1.00 47.13 P
ATOM 26 OP1 U A 24 -9.425 15.632 -1.546 1.00 48.68 O
ATOM 27 OP2 U A 24 -8.134 15.681 -3.772 1.00 40.79 O
ATOM 28 O5' U A 24 -8.125 17.658 -2.243 1.00 52.45 O
TER
ATOM 1 O3' G B 60 0.480 13.310 -9.365 1.00 47.88 O
ATOM 2 P A B 61 1.346 12.852 -8.100 1.00 53.82 P
ATOM 3 OP1 A B 61 2.745 12.742 -8.569 1.00 46.36 O
ATOM 4 OP2 A B 61 0.683 11.691 -7.471 1.00 51.90 O
ATOM 5 O5' A B 61 1.216 14.077 -7.075 1.00 54.22 O
ATOM 6 C5' A B 61 2.267 15.026 -6.876 1.00 50.65 C
ATOM 7 C4' A B 61 2.474 15.932 -8.077 1.00 47.74 C
ATOM 8 O4' A B 61 1.227 16.578 -8.436 1.00 50.36 O
ATOM 9 C3' A B 61 3.435 17.084 -7.837 1.00 48.06 C
ATOM 10 O3' A B 61 4.770 16.670 -8.058 1.00 47.22 O
ATOM 11 C2' A B 61 2.979 18.092 -8.886 1.00 46.41 C
ATOM 12 O2' A B 61 3.421 17.764 -10.189 1.00 40.05 O
ATOM 13 C1' A B 61 1.468 17.930 -8.777 1.00 45.42 C
ATOM 14 N9 A B 61 0.865 18.763 -7.744 1.00 44.38 N
ATOM 15 C8 A B 61 0.208 18.338 -6.623 1.00 46.22 C
ATOM 16 N7 A B 61 -0.238 19.313 -5.867 1.00 44.34 N
ATOM 17 C5 A B 61 0.154 20.456 -6.539 1.00 43.94 C
ATOM 18 C6 A B 61 -0.015 21.823 -6.256 1.00 44.50 C
ATOM 19 N6 A B 61 -0.652 22.278 -5.171 1.00 43.84 N
ATOM 20 N1 A B 61 0.501 22.707 -7.135 1.00 44.72 N
ATOM 21 C2 A B 61 1.138 22.248 -8.220 1.00 44.45 C
ATOM 22 N3 A B 61 1.359 20.989 -8.593 1.00 45.76 N
ATOM 23 C4 A B 61 0.836 20.136 -7.699 1.00 45.56 C
ATOM 24 P A B 62 5.843 16.916 -6.902 1.00 54.12 P
ATOM 25 OP1 A B 62 7.085 16.226 -7.311 1.00 45.31 O
ATOM 26 OP2 A B 62 5.191 16.610 -5.607 1.00 44.54 O
ATOM 27 O5' A B 62 6.093 18.498 -6.950 1.00 57.91 O
TER
Atoms:
OP1: (-5.521,16.007,2.940)
OP2: (-3.882,14.588,4.294)
C3': (-6.951,14.365,-0.875)
C1': (-5.207,13.308,-1.987)
C5': (-6.028,13.631,1.372)
O6: (-2.224,8.865,-4.699)
O4': (-4.719,13.584,-0.689)
C8: (-4.983,10.802,-2.079)
C2: (-2.122,12.409,-4.973)
C6: (-2.520,10.045,-4.467)
C5: (-3.474,10.546,-3.553)
C4: (-3.654,11.907,-3.442)
P: (-4.448,14.990,2.986)
C4': (-5.738,14.308,0.047)
C2': (-6.712,13.197,-1.814)
O2': (-7.352,13.378,-3.058)
N1: (-1.876,11.070,-5.151)
N2: (-1.390,13.236,-5.735)
N3: (-3.014,12.894,-4.116)
N7: (-4.318,9.862,-2.688)
N9: (-4.632,12.067,-2.483)
O5': (-4.917,13.649,2.255)
O3': (-6.944,15.579,-1.593)
OP2: (-3.882,14.588,4.294)
C3': (-6.951,14.365,-0.875)
C1': (-5.207,13.308,-1.987)
C5': (-6.028,13.631,1.372)
O6: (-2.224,8.865,-4.699)
O4': (-4.719,13.584,-0.689)
C8: (-4.983,10.802,-2.079)
C2: (-2.122,12.409,-4.973)
C6: (-2.520,10.045,-4.467)
C5: (-3.474,10.546,-3.553)
C4: (-3.654,11.907,-3.442)
P: (-4.448,14.990,2.986)
C4': (-5.738,14.308,0.047)
C2': (-6.712,13.197,-1.814)
O2': (-7.352,13.378,-3.058)
N1: (-1.876,11.070,-5.151)
N2: (-1.390,13.236,-5.735)
N3: (-3.014,12.894,-4.116)
N7: (-4.318,9.862,-2.688)
N9: (-4.632,12.067,-2.483)
O5': (-4.917,13.649,2.255)
O3': (-6.944,15.579,-1.593)
OP1: (2.745,12.742,-8.569)
OP2: (0.683,11.691,-7.471)
C3': (3.435,17.084,-7.837)
C1': (1.468,17.930,-8.777)
C5': (2.267,15.026,-6.876)
O4': (1.227,16.578,-8.436)
C8: (0.208,18.338,-6.623)
O2': (3.421,17.764,-10.189)
C6: (-0.015,21.823,-6.256)
C5: (0.154,20.456,-6.539)
C4: (0.836,20.136,-7.699)
P: (1.346,12.852,-8.100)
C4': (2.474,15.932,-8.077)
C2': (2.979,18.092,-8.886)
C2: (1.138,22.248,-8.220)
N1: (0.501,22.707,-7.135)
N3: (1.359,20.989,-8.593)
N6: (-0.652,22.278,-5.171)
N7: (-0.238,19.313,-5.867)
N9: (0.865,18.763,-7.744)
O5': (1.216,14.077,-7.075)
O3': (4.770,16.670,-8.058)
OP2: (0.683,11.691,-7.471)
C3': (3.435,17.084,-7.837)
C1': (1.468,17.930,-8.777)
C5': (2.267,15.026,-6.876)
O4': (1.227,16.578,-8.436)
C8: (0.208,18.338,-6.623)
O2': (3.421,17.764,-10.189)
C6: (-0.015,21.823,-6.256)
C5: (0.154,20.456,-6.539)
C4: (0.836,20.136,-7.699)
P: (1.346,12.852,-8.100)
C4': (2.474,15.932,-8.077)
C2': (2.979,18.092,-8.886)
C2: (1.138,22.248,-8.220)
N1: (0.501,22.707,-7.135)
N3: (1.359,20.989,-8.593)
N6: (-0.652,22.278,-5.171)
N7: (-0.238,19.313,-5.867)
N9: (0.865,18.763,-7.744)
O5': (1.216,14.077,-7.075)
O3': (4.770,16.670,-8.058)
Image (generated by PyMOL):