ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YHQ:0442:015

Extra

PDB:
ATOM 1 O3' A A 441 38.736 135.588 59.720 1.00 29.34 O
ATOM 2 P U A 442 38.926 135.357 61.299 1.00 28.91 P
ATOM 3 OP1 U A 442 37.610 135.046 61.901 1.00 31.41 O
ATOM 4 OP2 U A 442 39.713 136.492 61.821 1.00 30.64 O
ATOM 5 O5' U A 442 39.832 134.054 61.384 1.00 26.89 O
ATOM 6 C5' U A 442 41.197 134.071 60.940 1.00 25.01 C
ATOM 7 C4' U A 442 42.042 133.199 61.836 1.00 24.92 C
ATOM 8 O4' U A 442 41.988 133.731 63.188 1.00 26.43 O
ATOM 9 C3' U A 442 41.606 131.738 61.944 1.00 24.33 C
ATOM 10 O3' U A 442 42.752 130.925 62.173 1.00 21.98 O
ATOM 11 C2' U A 442 40.741 131.750 63.198 1.00 25.14 C
ATOM 12 O2' U A 442 40.640 130.495 63.832 1.00 27.31 O
ATOM 13 C1' U A 442 41.519 132.732 64.065 1.00 27.53 C
ATOM 14 N1 U A 442 40.742 133.364 65.138 1.00 29.92 N
ATOM 15 C2 U A 442 41.192 133.185 66.436 1.00 34.12 C
ATOM 16 O2 U A 442 42.190 132.542 66.711 1.00 38.42 O
ATOM 17 N3 U A 442 40.427 133.779 67.404 1.00 34.80 N
ATOM 18 C4 U A 442 39.285 134.513 67.216 1.00 35.58 C
ATOM 19 O4 U A 442 38.694 134.962 68.193 1.00 39.48 O
ATOM 20 C5 U A 442 38.886 134.661 65.848 1.00 34.79 C
ATOM 21 C6 U A 442 39.613 134.095 64.879 1.00 31.27 C
ATOM 22 P A A 443 43.507 130.254 60.931 1.00 22.66 P
ATOM 23 OP1 A A 443 44.377 129.166 61.445 1.00 22.52 O
ATOM 24 OP2 A A 443 44.097 131.323 60.082 1.00 20.49 O
ATOM 25 O5' A A 443 42.327 129.622 60.074 1.00 25.66 O
TER

ATOM 1 O3' G B 14 34.443 138.082 67.008 1.00 26.26 O
ATOM 2 P A B 15 34.838 137.227 65.706 1.00 26.24 P
ATOM 3 OP1 A B 15 36.305 137.006 65.703 1.00 28.48 O
ATOM 4 OP2 A B 15 34.184 137.795 64.507 1.00 27.36 O
ATOM 5 O5' A B 15 34.132 135.831 65.996 1.00 27.81 O
ATOM 6 C5' A B 15 34.586 134.987 67.062 1.00 26.88 C
ATOM 7 C4' A B 15 33.416 134.293 67.709 1.00 28.25 C
ATOM 8 O4' A B 15 32.623 135.242 68.472 1.00 30.14 O
ATOM 9 C3' A B 15 32.416 133.671 66.757 1.00 27.86 C
ATOM 10 O3' A B 15 32.860 132.416 66.262 1.00 29.42 O
ATOM 11 C2' A B 15 31.184 133.546 67.638 1.00 29.23 C
ATOM 12 O2' A B 15 31.274 132.449 68.518 1.00 31.84 O
ATOM 13 C1' A B 15 31.261 134.844 68.449 1.00 30.63 C
ATOM 14 N9 A B 15 30.465 135.927 67.863 1.00 32.44 N
ATOM 15 C8 A B 15 30.914 137.082 67.266 1.00 33.62 C
ATOM 16 N7 A B 15 29.954 137.856 66.821 1.00 33.87 N
ATOM 17 C5 A B 15 28.795 137.168 67.145 1.00 33.30 C
ATOM 18 C6 A B 15 27.441 137.455 66.933 1.00 33.87 C
ATOM 19 N6 A B 15 27.007 138.561 66.323 1.00 34.38 N
ATOM 20 N1 A B 15 26.533 136.556 67.373 1.00 33.19 N
ATOM 21 C2 A B 15 26.968 135.452 67.986 1.00 30.08 C
ATOM 22 N3 A B 15 28.210 135.072 68.246 1.00 32.00 N
ATOM 23 C4 A B 15 29.091 135.983 67.793 1.00 32.73 C
ATOM 24 P U B 16 32.366 131.911 64.815 1.00 27.71 P
ATOM 25 OP1 U B 16 32.793 130.500 64.653 1.00 27.72 O
ATOM 26 OP2 U B 16 32.770 132.923 63.810 1.00 26.02 O
ATOM 27 O5' U B 16 30.782 131.933 64.935 1.00 26.83 O
TER

Atoms:
C4: (39.285,134.513,67.216)
N3: (40.427,133.779,67.404)
OP1: (37.610,135.046,61.901)
OP2: (39.713,136.492,61.821)
C2: (41.192,133.185,66.436)
C1': (41.519,132.732,64.065)
C3': (41.606,131.738,61.944)
O5': (39.832,134.054,61.384)
O4': (41.988,133.731,63.188)
C5': (41.197,134.071,60.940)
P: (38.926,135.357,61.299)
C4': (42.042,133.199,61.836)
C2': (40.741,131.750,63.198)
O2': (40.640,130.495,63.832)
N1: (40.742,133.364,65.138)
O4: (38.694,134.962,68.193)
O2: (42.190,132.542,66.711)
C6: (39.613,134.095,64.879)
C5: (38.886,134.661,65.848)
O3': (42.752,130.925,62.173)
OP1: (36.305,137.006,65.703)
OP2: (34.184,137.795,64.507)
C3': (32.416,133.671,66.757)
C1': (31.261,134.844,68.449)
C5': (34.586,134.987,67.062)
O4': (32.623,135.242,68.472)
C8: (30.914,137.082,67.266)
O2': (31.274,132.449,68.518)
C6: (27.441,137.455,66.933)
C5: (28.795,137.168,67.145)
C4: (29.091,135.983,67.793)
P: (34.838,137.227,65.706)
C4': (33.416,134.293,67.709)
C2': (31.184,133.546,67.638)
C2: (26.968,135.452,67.986)
N1: (26.533,136.556,67.373)
N3: (28.210,135.072,68.246)
N6: (27.007,138.561,66.323)
N7: (29.954,137.856,66.821)
N9: (30.465,135.927,67.863)
O5': (34.132,135.831,65.996)
O3': (32.860,132.416,66.262)
Image (generated by PyMOL):
PyMOL image
show in jmol