ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ6:01247:01246

Extra

PDB:
ATOM 1 O3' A A1246 15.841 85.628 90.754 1.00 57.77 O
ATOM 2 P U A1247 16.650 85.963 89.409 1.00 56.47 P
ATOM 3 OP1 U A1247 17.673 86.972 89.785 1.00 58.65 O
ATOM 4 OP2 U A1247 15.671 86.282 88.341 1.00 56.81 O
ATOM 5 O5' U A1247 17.381 84.598 89.024 1.00 56.88 O
ATOM 6 C5' U A1247 18.675 84.267 89.562 1.00 55.57 C
ATOM 7 C4' U A1247 19.121 82.909 89.064 1.00 56.63 C
ATOM 8 O4' U A1247 18.114 81.921 89.409 1.00 55.21 O
ATOM 9 C3' U A1247 19.266 82.743 87.560 1.00 57.63 C
ATOM 10 O3' U A1247 20.500 83.240 87.059 1.00 62.69 O
ATOM 11 C2' U A1247 19.177 81.232 87.406 1.00 56.20 C
ATOM 12 O2' U A1247 20.364 80.555 87.767 1.00 55.40 O
ATOM 13 C1' U A1247 18.083 80.902 88.418 1.00 54.17 C
ATOM 14 N1 U A1247 16.748 80.880 87.797 1.00 52.48 N
ATOM 15 C2 U A1247 16.407 79.772 87.036 1.00 51.39 C
ATOM 16 O2 U A1247 17.153 78.821 86.867 1.00 50.73 O
ATOM 17 N3 U A1247 15.156 79.818 86.480 1.00 51.36 N
ATOM 18 C4 U A1247 14.229 80.828 86.605 1.00 52.41 C
ATOM 19 O4 U A1247 13.142 80.717 86.045 1.00 55.75 O
ATOM 20 C5 U A1247 14.649 81.936 87.402 1.00 51.56 C
ATOM 21 C6 U A1247 15.863 81.926 87.957 1.00 52.58 C
ATOM 22 P C A1248 20.508 84.253 85.806 1.00 63.10 P
ATOM 23 OP1 C A1248 19.396 83.921 84.883 1.00 64.29 O
ATOM 24 OP2 C A1248 21.894 84.260 85.293 1.00 64.31 O
ATOM 25 O5' C A1248 20.228 85.670 86.480 1.00 64.53 O
TER

ATOM 1 O3' A B1245 12.776 84.895 87.299 1.00 59.51 O
ATOM 2 P A B1246 11.617 85.291 88.339 1.00 57.46 P
ATOM 3 OP1 A B1246 10.448 84.447 88.001 1.00 63.02 O
ATOM 4 OP2 A B1246 11.457 86.761 88.417 1.00 58.11 O
ATOM 5 O5' A B1246 12.160 84.758 89.733 1.00 59.93 O
ATOM 6 C5' A B1246 12.613 85.652 90.763 1.00 57.47 C
ATOM 7 C4' A B1246 13.672 84.965 91.583 1.00 56.70 C
ATOM 8 O4' A B1246 13.124 83.716 92.076 1.00 53.54 O
ATOM 9 C3' A B1246 14.899 84.556 90.780 1.00 57.00 C
ATOM 10 O3' A B1246 15.841 85.628 90.754 1.00 57.77 O
ATOM 11 C2' A B1246 15.412 83.353 91.557 1.00 55.31 C
ATOM 12 O2' A B1246 16.118 83.715 92.725 1.00 58.18 O
ATOM 13 C1' A B1246 14.101 82.698 91.987 1.00 53.20 C
ATOM 14 N9 A B1246 13.626 81.692 91.043 1.00 50.16 N
ATOM 15 C8 A B1246 12.467 81.693 90.309 1.00 50.04 C
ATOM 16 N7 A B1246 12.326 80.639 89.545 1.00 51.07 N
ATOM 17 C5 A B1246 13.470 79.894 89.794 1.00 49.34 C
ATOM 18 C6 A B1246 13.929 78.670 89.286 1.00 49.43 C
ATOM 19 N6 A B1246 13.267 77.947 88.387 1.00 50.42 N
ATOM 20 N1 A B1246 15.114 78.208 89.739 1.00 50.64 N
ATOM 21 C2 A B1246 15.784 78.938 90.641 1.00 49.75 C
ATOM 22 N3 A B1246 15.456 80.102 91.189 1.00 48.70 N
ATOM 23 C4 A B1246 14.276 80.530 90.716 1.00 48.60 C
ATOM 24 P U B1247 16.650 85.963 89.409 1.00 56.47 P
ATOM 25 OP1 U B1247 17.673 86.972 89.785 1.00 58.65 O
ATOM 26 OP2 U B1247 15.671 86.282 88.341 1.00 56.81 O
ATOM 27 O5' U B1247 17.381 84.598 89.024 1.00 56.88 O
TER

Atoms:
C4: (14.229,80.828,86.605)
N3: (15.156,79.818,86.480)
OP1: (17.673,86.972,89.785)
OP2: (15.671,86.282,88.341)
C2: (16.407,79.772,87.036)
C1': (18.083,80.902,88.418)
C3': (19.266,82.743,87.560)
O5': (17.381,84.598,89.024)
O4': (18.114,81.921,89.409)
C5': (18.675,84.267,89.562)
P: (16.650,85.963,89.409)
C4': (19.121,82.909,89.064)
C2': (19.177,81.232,87.406)
O2': (20.364,80.555,87.767)
N1: (16.748,80.880,87.797)
O4: (13.142,80.717,86.045)
O2: (17.153,78.821,86.867)
C6: (15.863,81.926,87.957)
C5: (14.649,81.936,87.402)
O3': (20.500,83.240,87.059)
OP1: (10.448,84.447,88.001)
OP2: (11.457,86.761,88.417)
C3': (14.899,84.556,90.780)
C1': (14.101,82.698,91.987)
C5': (12.613,85.652,90.763)
O4': (13.124,83.716,92.076)
C8: (12.467,81.693,90.309)
O2': (16.118,83.715,92.725)
C6: (13.929,78.670,89.286)
C5: (13.470,79.894,89.794)
C4: (14.276,80.530,90.716)
P: (11.617,85.291,88.339)
C4': (13.672,84.965,91.583)
C2': (15.412,83.353,91.557)
C2: (15.784,78.938,90.641)
N1: (15.114,78.208,89.739)
N3: (15.456,80.102,91.189)
N6: (13.267,77.947,88.387)
N7: (12.326,80.639,89.545)
N9: (13.626,81.692,91.043)
O5': (12.160,84.758,89.733)
O3': (15.841,85.628,90.754)
Image (generated by PyMOL):
PyMOL image
show in jmol