Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A490:A493
Extra
PDB:
ATOM 1 O3' U A 489 47.112-101.302 -37.876 1.00 42.97 O
ATOM 2 P G A 490 47.818-101.883 -39.209 1.00 52.93 P
ATOM 3 OP1 G A 490 49.031-102.681 -38.820 1.00 58.08 O
ATOM 4 OP2 G A 490 47.964-100.748 -40.166 1.00 50.03 O
ATOM 5 O5' G A 490 46.764-102.925 -39.791 1.00 54.35 O
ATOM 6 C5' G A 490 46.689-104.249 -39.271 1.00 57.38 C
ATOM 7 C4' G A 490 45.546-104.995 -39.906 1.00 56.17 C
ATOM 8 O4' G A 490 44.297-104.354 -39.538 1.00 53.01 O
ATOM 9 C3' G A 490 45.514-105.031 -41.428 1.00 56.91 C
ATOM 10 O3' G A 490 46.355-106.040 -41.986 1.00 52.69 O
ATOM 11 C2' G A 490 44.040-105.282 -41.720 1.00 59.82 C
ATOM 12 O2' G A 490 43.719-106.656 -41.670 1.00 66.78 O
ATOM 13 C1' G A 490 43.359-104.512 -40.585 1.00 55.35 C
ATOM 14 N9 G A 490 42.980-103.191 -41.051 1.00 58.14 N
ATOM 15 C8 G A 490 43.788-102.085 -41.159 1.00 61.60 C
ATOM 16 N7 G A 490 43.180-101.058 -41.685 1.00 62.29 N
ATOM 17 C5 G A 490 41.891-101.511 -41.921 1.00 64.50 C
ATOM 18 C6 G A 490 40.778-100.851 -42.497 1.00 69.58 C
ATOM 19 O6 G A 490 40.711 -99.688 -42.941 1.00 68.73 O
ATOM 20 N1 G A 490 39.656-101.685 -42.540 1.00 69.50 N
ATOM 21 C2 G A 490 39.616-102.986 -42.089 1.00 67.07 C
ATOM 22 N2 G A 490 38.437-103.611 -42.193 1.00 65.72 N
ATOM 23 N3 G A 490 40.657-103.617 -41.569 1.00 68.14 N
ATOM 24 C4 G A 490 41.751-102.824 -41.514 1.00 65.15 C
ATOM 25 P A A 491 46.883-105.872 -43.491 1.00 64.08 P
ATOM 26 OP1 A A 491 47.498-107.148 -43.908 1.00 51.29 O
ATOM 27 OP2 A A 491 47.681-104.627 -43.534 1.00 65.04 O
ATOM 28 O5' A A 491 45.560-105.633 -44.350 1.00 57.41 O
TER
ATOM 1 O3' A B 492 36.720-103.670 -45.650 1.00 59.83 O
ATOM 2 P A B 493 36.590-102.162 -45.132 1.00 58.01 P
ATOM 3 OP1 A B 493 35.638-101.456 -46.007 1.00 61.11 O
ATOM 4 OP2 A B 493 37.975-101.661 -44.997 1.00 67.64 O
ATOM 5 O5' A B 493 35.984-102.262 -43.658 1.00 53.64 O
ATOM 6 C5' A B 493 34.584-102.464 -43.413 1.00 58.00 C
ATOM 7 C4' A B 493 34.358-102.852 -41.956 1.00 63.19 C
ATOM 8 O4' A B 493 35.623-103.071 -41.295 1.00 62.32 O
ATOM 9 C3' A B 493 33.645-101.833 -41.056 1.00 61.43 C
ATOM 10 O3' A B 493 32.248-102.013 -40.738 1.00 66.16 O
ATOM 11 C2' A B 493 34.357-101.953 -39.705 1.00 59.52 C
ATOM 12 O2' A B 493 33.467-102.338 -38.689 1.00 65.85 O
ATOM 13 C1' A B 493 35.355-103.089 -39.927 1.00 65.17 C
ATOM 14 N9 A B 493 36.580-102.848 -39.178 1.00 68.01 N
ATOM 15 C8 A B 493 37.500-101.849 -39.363 1.00 72.20 C
ATOM 16 N7 A B 493 38.415-101.800 -38.430 1.00 74.19 N
ATOM 17 C5 A B 493 38.097-102.856 -37.594 1.00 69.00 C
ATOM 18 C6 A B 493 38.661-103.308 -36.407 1.00 68.36 C
ATOM 19 N6 A B 493 39.682-102.698 -35.805 1.00 61.51 N
ATOM 20 N1 A B 493 38.124-104.400 -35.832 1.00 69.63 N
ATOM 21 C2 A B 493 37.067-104.971 -36.413 1.00 68.22 C
ATOM 22 N3 A B 493 36.426-104.622 -37.516 1.00 63.78 N
ATOM 23 C4 A B 493 36.997-103.539 -38.067 1.00 65.55 C
ATOM 24 P A B 494 31.395-103.238 -41.326 1.00 64.92 P
ATOM 25 OP1 A B 494 31.871-103.571 -42.691 1.00 65.12 O
ATOM 26 OP2 A B 494 29.977-102.864 -41.118 1.00 73.52 O
ATOM 27 O5' A B 494 31.704-104.465 -40.357 1.00 55.80 O
TER
ATOM 2 P G A 490 47.818-101.883 -39.209 1.00 52.93 P
ATOM 3 OP1 G A 490 49.031-102.681 -38.820 1.00 58.08 O
ATOM 4 OP2 G A 490 47.964-100.748 -40.166 1.00 50.03 O
ATOM 5 O5' G A 490 46.764-102.925 -39.791 1.00 54.35 O
ATOM 6 C5' G A 490 46.689-104.249 -39.271 1.00 57.38 C
ATOM 7 C4' G A 490 45.546-104.995 -39.906 1.00 56.17 C
ATOM 8 O4' G A 490 44.297-104.354 -39.538 1.00 53.01 O
ATOM 9 C3' G A 490 45.514-105.031 -41.428 1.00 56.91 C
ATOM 10 O3' G A 490 46.355-106.040 -41.986 1.00 52.69 O
ATOM 11 C2' G A 490 44.040-105.282 -41.720 1.00 59.82 C
ATOM 12 O2' G A 490 43.719-106.656 -41.670 1.00 66.78 O
ATOM 13 C1' G A 490 43.359-104.512 -40.585 1.00 55.35 C
ATOM 14 N9 G A 490 42.980-103.191 -41.051 1.00 58.14 N
ATOM 15 C8 G A 490 43.788-102.085 -41.159 1.00 61.60 C
ATOM 16 N7 G A 490 43.180-101.058 -41.685 1.00 62.29 N
ATOM 17 C5 G A 490 41.891-101.511 -41.921 1.00 64.50 C
ATOM 18 C6 G A 490 40.778-100.851 -42.497 1.00 69.58 C
ATOM 19 O6 G A 490 40.711 -99.688 -42.941 1.00 68.73 O
ATOM 20 N1 G A 490 39.656-101.685 -42.540 1.00 69.50 N
ATOM 21 C2 G A 490 39.616-102.986 -42.089 1.00 67.07 C
ATOM 22 N2 G A 490 38.437-103.611 -42.193 1.00 65.72 N
ATOM 23 N3 G A 490 40.657-103.617 -41.569 1.00 68.14 N
ATOM 24 C4 G A 490 41.751-102.824 -41.514 1.00 65.15 C
ATOM 25 P A A 491 46.883-105.872 -43.491 1.00 64.08 P
ATOM 26 OP1 A A 491 47.498-107.148 -43.908 1.00 51.29 O
ATOM 27 OP2 A A 491 47.681-104.627 -43.534 1.00 65.04 O
ATOM 28 O5' A A 491 45.560-105.633 -44.350 1.00 57.41 O
TER
ATOM 1 O3' A B 492 36.720-103.670 -45.650 1.00 59.83 O
ATOM 2 P A B 493 36.590-102.162 -45.132 1.00 58.01 P
ATOM 3 OP1 A B 493 35.638-101.456 -46.007 1.00 61.11 O
ATOM 4 OP2 A B 493 37.975-101.661 -44.997 1.00 67.64 O
ATOM 5 O5' A B 493 35.984-102.262 -43.658 1.00 53.64 O
ATOM 6 C5' A B 493 34.584-102.464 -43.413 1.00 58.00 C
ATOM 7 C4' A B 493 34.358-102.852 -41.956 1.00 63.19 C
ATOM 8 O4' A B 493 35.623-103.071 -41.295 1.00 62.32 O
ATOM 9 C3' A B 493 33.645-101.833 -41.056 1.00 61.43 C
ATOM 10 O3' A B 493 32.248-102.013 -40.738 1.00 66.16 O
ATOM 11 C2' A B 493 34.357-101.953 -39.705 1.00 59.52 C
ATOM 12 O2' A B 493 33.467-102.338 -38.689 1.00 65.85 O
ATOM 13 C1' A B 493 35.355-103.089 -39.927 1.00 65.17 C
ATOM 14 N9 A B 493 36.580-102.848 -39.178 1.00 68.01 N
ATOM 15 C8 A B 493 37.500-101.849 -39.363 1.00 72.20 C
ATOM 16 N7 A B 493 38.415-101.800 -38.430 1.00 74.19 N
ATOM 17 C5 A B 493 38.097-102.856 -37.594 1.00 69.00 C
ATOM 18 C6 A B 493 38.661-103.308 -36.407 1.00 68.36 C
ATOM 19 N6 A B 493 39.682-102.698 -35.805 1.00 61.51 N
ATOM 20 N1 A B 493 38.124-104.400 -35.832 1.00 69.63 N
ATOM 21 C2 A B 493 37.067-104.971 -36.413 1.00 68.22 C
ATOM 22 N3 A B 493 36.426-104.622 -37.516 1.00 63.78 N
ATOM 23 C4 A B 493 36.997-103.539 -38.067 1.00 65.55 C
ATOM 24 P A B 494 31.395-103.238 -41.326 1.00 64.92 P
ATOM 25 OP1 A B 494 31.871-103.571 -42.691 1.00 65.12 O
ATOM 26 OP2 A B 494 29.977-102.864 -41.118 1.00 73.52 O
ATOM 27 O5' A B 494 31.704-104.465 -40.357 1.00 55.80 O
TER
Atoms:
OP1: (49.031,-102.681,-38.820)
OP2: (47.964,-100.748,-40.166)
C3': (45.514,-105.031,-41.428)
C1': (43.359,-104.512,-40.585)
C5': (46.689,-104.249,-39.271)
O6: (40.711,-99.688,-42.941)
O4': (44.297,-104.354,-39.538)
C8: (43.788,-102.085,-41.159)
C2: (39.616,-102.986,-42.089)
C6: (40.778,-100.851,-42.497)
C5: (41.891,-101.511,-41.921)
C4: (41.751,-102.824,-41.514)
P: (47.818,-101.883,-39.209)
C4': (45.546,-104.995,-39.906)
C2': (44.040,-105.282,-41.720)
O2': (43.719,-106.656,-41.670)
N1: (39.656,-101.685,-42.540)
N2: (38.437,-103.611,-42.193)
N3: (40.657,-103.617,-41.569)
N7: (43.180,-101.058,-41.685)
N9: (42.980,-103.191,-41.051)
O5': (46.764,-102.925,-39.791)
O3': (46.355,-106.040,-41.986)
OP2: (47.964,-100.748,-40.166)
C3': (45.514,-105.031,-41.428)
C1': (43.359,-104.512,-40.585)
C5': (46.689,-104.249,-39.271)
O6: (40.711,-99.688,-42.941)
O4': (44.297,-104.354,-39.538)
C8: (43.788,-102.085,-41.159)
C2: (39.616,-102.986,-42.089)
C6: (40.778,-100.851,-42.497)
C5: (41.891,-101.511,-41.921)
C4: (41.751,-102.824,-41.514)
P: (47.818,-101.883,-39.209)
C4': (45.546,-104.995,-39.906)
C2': (44.040,-105.282,-41.720)
O2': (43.719,-106.656,-41.670)
N1: (39.656,-101.685,-42.540)
N2: (38.437,-103.611,-42.193)
N3: (40.657,-103.617,-41.569)
N7: (43.180,-101.058,-41.685)
N9: (42.980,-103.191,-41.051)
O5': (46.764,-102.925,-39.791)
O3': (46.355,-106.040,-41.986)
OP1: (35.638,-101.456,-46.007)
OP2: (37.975,-101.661,-44.997)
C3': (33.645,-101.833,-41.056)
C1': (35.355,-103.089,-39.927)
C5': (34.584,-102.464,-43.413)
O4': (35.623,-103.071,-41.295)
C8: (37.500,-101.849,-39.363)
O2': (33.467,-102.338,-38.689)
C6: (38.661,-103.308,-36.407)
C5: (38.097,-102.856,-37.594)
C4: (36.997,-103.539,-38.067)
P: (36.590,-102.162,-45.132)
C4': (34.358,-102.852,-41.956)
C2': (34.357,-101.953,-39.705)
C2: (37.067,-104.971,-36.413)
N1: (38.124,-104.400,-35.832)
N3: (36.426,-104.622,-37.516)
N6: (39.682,-102.698,-35.805)
N7: (38.415,-101.800,-38.430)
N9: (36.580,-102.848,-39.178)
O5': (35.984,-102.262,-43.658)
O3': (32.248,-102.013,-40.738)
OP2: (37.975,-101.661,-44.997)
C3': (33.645,-101.833,-41.056)
C1': (35.355,-103.089,-39.927)
C5': (34.584,-102.464,-43.413)
O4': (35.623,-103.071,-41.295)
C8: (37.500,-101.849,-39.363)
O2': (33.467,-102.338,-38.689)
C6: (38.661,-103.308,-36.407)
C5: (38.097,-102.856,-37.594)
C4: (36.997,-103.539,-38.067)
P: (36.590,-102.162,-45.132)
C4': (34.358,-102.852,-41.956)
C2': (34.357,-101.953,-39.705)
C2: (37.067,-104.971,-36.413)
N1: (38.124,-104.400,-35.832)
N3: (36.426,-104.622,-37.516)
N6: (39.682,-102.698,-35.805)
N7: (38.415,-101.800,-38.430)
N9: (36.580,-102.848,-39.178)
O5': (35.984,-102.262,-43.658)
O3': (32.248,-102.013,-40.738)
Image (generated by PyMOL):