ClaRNA

Doublet info:

Details

Nucleotide types: AC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1NJI:A686:A687

Extra

PDB:
ATOM 1 O3' G A 685 51.378 61.247 38.533 1.00 39.16 O
ATOM 2 P A A 686 49.830 61.453 38.119 1.00 38.32 P
ATOM 3 OP1 A A 686 49.349 60.121 37.700 1.00 39.95 O
ATOM 4 OP2 A A 686 49.653 62.595 37.199 1.00 39.19 O
ATOM 5 O5' A A 686 49.166 61.841 39.512 1.00 40.04 O
ATOM 6 C5' A A 686 47.766 61.650 39.788 1.00 41.96 C
ATOM 7 C4' A A 686 47.528 61.799 41.276 1.00 44.29 C
ATOM 8 O4' A A 686 47.947 63.120 41.696 1.00 45.43 O
ATOM 9 C3' A A 686 46.095 61.746 41.782 1.00 45.02 C
ATOM 10 O3' A A 686 45.679 60.387 41.931 1.00 48.11 O
ATOM 11 C2' A A 686 46.205 62.411 43.160 1.00 44.62 C
ATOM 12 O2' A A 686 46.540 61.494 44.178 1.00 44.24 O
ATOM 13 C1' A A 686 47.383 63.382 42.964 1.00 44.50 C
ATOM 14 N9 A A 686 47.111 64.819 43.100 1.00 42.98 N
ATOM 15 C8 A A 686 46.219 65.607 42.410 1.00 42.05 C
ATOM 16 N7 A A 686 46.201 66.860 42.806 1.00 42.50 N
ATOM 17 C5 A A 686 47.151 66.904 43.822 1.00 41.87 C
ATOM 18 C6 A A 686 47.604 67.947 44.664 1.00 40.58 C
ATOM 19 N6 A A 686 47.132 69.196 44.623 1.00 39.33 N
ATOM 20 N1 A A 686 48.567 67.650 45.565 1.00 38.97 N
ATOM 21 C2 A A 686 49.032 66.397 45.620 1.00 39.28 C
ATOM 22 N3 A A 686 48.685 65.338 44.897 1.00 41.09 N
ATOM 23 C4 A A 686 47.728 65.659 44.005 1.00 41.91 C
ATOM 24 P C A 687 44.171 59.961 41.577 1.00 50.88 P
ATOM 25 OP1 C A 687 44.062 58.484 41.742 1.00 50.03 O
ATOM 26 OP2 C A 687 43.828 60.585 40.269 1.00 51.55 O
ATOM 27 O5' C A 687 43.293 60.662 42.699 1.00 51.16 O
TER

ATOM 1 O3' A B 686 45.679 60.387 41.931 1.00 48.11 O
ATOM 2 P C B 687 44.171 59.961 41.577 1.00 50.88 P
ATOM 3 OP1 C B 687 44.062 58.484 41.742 1.00 50.03 O
ATOM 4 OP2 C B 687 43.828 60.585 40.269 1.00 51.55 O
ATOM 5 O5' C B 687 43.293 60.662 42.699 1.00 51.16 O
ATOM 6 C5' C B 687 41.937 61.066 42.430 1.00 50.07 C
ATOM 7 C4' C B 687 41.032 60.481 43.476 1.00 50.17 C
ATOM 8 O4' C B 687 41.593 60.737 44.770 1.00 49.32 O
ATOM 9 C3' C B 687 39.643 61.082 43.630 1.00 49.13 C
ATOM 10 O3' C B 687 38.753 60.431 42.738 1.00 48.62 O
ATOM 11 C2' C B 687 39.252 60.666 45.053 1.00 50.01 C
ATOM 12 O2' C B 687 38.491 59.475 45.078 1.00 52.24 O
ATOM 13 C1' C B 687 40.616 60.368 45.692 1.00 49.48 C
ATOM 14 N1 C B 687 40.916 60.961 46.996 1.00 47.80 N
ATOM 15 C2 C B 687 41.225 60.106 48.044 1.00 46.69 C
ATOM 16 O2 C B 687 41.265 58.880 47.831 1.00 46.49 O
ATOM 17 N3 C B 687 41.472 60.625 49.267 1.00 46.85 N
ATOM 18 C4 C B 687 41.414 61.940 49.458 1.00 46.28 C
ATOM 19 N4 C B 687 41.642 62.398 50.686 1.00 46.30 N
ATOM 20 C5 C B 687 41.115 62.839 48.402 1.00 46.08 C
ATOM 21 C6 C B 687 40.880 62.313 47.195 1.00 48.51 C
ATOM 22 P A B 688 38.576 60.965 41.248 1.00 48.25 P
ATOM 23 OP1 A B 688 38.860 59.800 40.380 1.00 48.87 O
ATOM 24 OP2 A B 688 39.337 62.214 41.055 1.00 50.98 O
ATOM 25 O5' A B 688 37.027 61.309 41.171 1.00 46.70 O
TER

Atoms:
OP1: (49.349,60.121,37.700)
OP2: (49.653,62.595,37.199)
C3': (46.095,61.746,41.782)
C1': (47.383,63.382,42.964)
C5': (47.766,61.650,39.788)
O4': (47.947,63.120,41.696)
C8: (46.219,65.607,42.410)
O2': (46.540,61.494,44.178)
C6: (47.604,67.947,44.664)
C5: (47.151,66.904,43.822)
C4: (47.728,65.659,44.005)
P: (49.830,61.453,38.119)
C4': (47.528,61.799,41.276)
C2': (46.205,62.411,43.160)
C2: (49.032,66.397,45.620)
N1: (48.567,67.650,45.565)
N3: (48.685,65.338,44.897)
N6: (47.132,69.196,44.623)
N7: (46.201,66.860,42.806)
N9: (47.111,64.819,43.100)
O5': (49.166,61.841,39.512)
O3': (45.679,60.387,41.931)
C2: (41.225,60.106,48.044)
OP1: (44.062,58.484,41.742)
OP2: (43.828,60.585,40.269)
C4: (41.414,61.940,49.458)
O5': (43.293,60.662,42.699)
C3': (39.643,61.082,43.630)
C1': (40.616,60.368,45.692)
O4': (41.593,60.737,44.770)
C5': (41.937,61.066,42.430)
P: (44.171,59.961,41.577)
O2: (41.265,58.880,47.831)
C4': (41.032,60.481,43.476)
C2': (39.252,60.666,45.053)
O2': (38.491,59.475,45.078)
N1: (40.916,60.961,46.996)
N3: (41.472,60.625,49.267)
N4: (41.642,62.398,50.686)
C6: (40.880,62.313,47.195)
C5: (41.115,62.839,48.402)
O3': (38.753,60.431,42.738)
Image (generated by PyMOL):
PyMOL image
show in jmol