Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OH5:A1375:A1513
Extra
PDB:
ATOM 1 O3' G A1374 18.477 -15.394 -29.522 1.00 49.75 O
ATOM 2 P G A1375 19.803 -15.683 -28.665 1.00 49.09 P
ATOM 3 OP1 G A1375 19.473 -15.411 -27.242 1.00 59.06 O
ATOM 4 OP2 G A1375 20.905 -14.930 -29.296 1.00 51.75 O
ATOM 5 O5' G A1375 20.026 -17.241 -28.898 1.00 50.68 O
ATOM 6 C5' G A1375 18.930 -18.142 -28.904 1.00 48.85 C
ATOM 7 C4' G A1375 19.262 -19.409 -29.658 1.00 47.02 C
ATOM 8 O4' G A1375 19.286 -19.147 -31.078 1.00 47.11 O
ATOM 9 C3' G A1375 20.608 -20.025 -29.351 1.00 41.36 C
ATOM 10 O3' G A1375 20.547 -20.888 -28.230 1.00 52.16 O
ATOM 11 C2' G A1375 20.990 -20.730 -30.658 1.00 39.49 C
ATOM 12 O2' G A1375 20.403 -22.017 -30.743 1.00 40.86 O
ATOM 13 C1' G A1375 20.332 -19.843 -31.699 1.00 38.02 C
ATOM 14 N9 G A1375 21.247 -18.843 -32.240 1.00 44.12 N
ATOM 15 C8 G A1375 21.477 -17.644 -31.611 1.00 46.66 C
ATOM 16 N7 G A1375 22.287 -16.897 -32.296 1.00 49.04 N
ATOM 17 C5 G A1375 22.575 -17.647 -33.427 1.00 39.75 C
ATOM 18 C6 G A1375 23.394 -17.331 -34.516 1.00 41.43 C
ATOM 19 O6 G A1375 24.037 -16.300 -34.688 1.00 59.61 O
ATOM 20 N1 G A1375 23.434 -18.338 -35.455 1.00 40.69 N
ATOM 21 C2 G A1375 22.758 -19.512 -35.353 1.00 41.88 C
ATOM 22 N2 G A1375 22.941 -20.344 -36.390 1.00 39.53 N
ATOM 23 N3 G A1375 21.978 -19.827 -34.331 1.00 38.77 N
ATOM 24 C4 G A1375 21.934 -18.850 -33.420 1.00 37.12 C
ATOM 25 P A A1376 21.871 -21.237 -27.404 1.00 65.28 P
ATOM 26 OP1 A A1376 22.639 -22.255 -28.200 1.00 53.01 O
ATOM 27 OP2 A A1376 21.446 -21.577 -26.030 1.00 57.31 O
ATOM 28 O5' A A1376 22.641 -19.858 -27.406 1.00 47.60 O
TER
ATOM 1 O3' A B1512 24.647 -22.280 -40.748 1.00 44.86 O
ATOM 2 P A B1513 23.229 -21.500 -40.729 1.00 43.57 P
ATOM 3 OP1 A B1513 23.059 -20.872 -42.073 1.00 28.67 O
ATOM 4 OP2 A B1513 23.228 -20.630 -39.534 1.00 46.79 O
ATOM 5 O5' A B1513 22.168 -22.683 -40.524 1.00 36.97 O
ATOM 6 C5' A B1513 22.032 -23.742 -41.475 1.00 39.80 C
ATOM 7 C4' A B1513 21.359 -24.954 -40.862 1.00 38.98 C
ATOM 8 O4' A B1513 22.074 -25.351 -39.663 1.00 39.26 O
ATOM 9 C3' A B1513 19.940 -24.748 -40.373 1.00 40.43 C
ATOM 10 O3' A B1513 18.974 -24.836 -41.398 1.00 39.62 O
ATOM 11 C2' A B1513 19.801 -25.813 -39.306 1.00 37.81 C
ATOM 12 O2' A B1513 19.645 -27.087 -39.890 1.00 47.86 O
ATOM 13 C1' A B1513 21.171 -25.755 -38.669 1.00 35.03 C
ATOM 14 N9 A B1513 21.214 -24.770 -37.592 1.00 36.16 N
ATOM 15 C8 A B1513 21.585 -23.461 -37.692 1.00 37.28 C
ATOM 16 N7 A B1513 21.512 -22.844 -36.537 1.00 40.46 N
ATOM 17 C5 A B1513 21.055 -23.799 -35.642 1.00 29.69 C
ATOM 18 C6 A B1513 20.769 -23.752 -34.279 1.00 26.77 C
ATOM 19 N6 A B1513 20.888 -22.677 -33.505 1.00 32.70 N
ATOM 20 N1 A B1513 20.346 -24.887 -33.726 1.00 33.70 N
ATOM 21 C2 A B1513 20.212 -25.979 -34.489 1.00 37.45 C
ATOM 22 N3 A B1513 20.433 -26.152 -35.780 1.00 29.08 N
ATOM 23 C4 A B1513 20.864 -24.999 -36.292 1.00 37.03 C
ATOM 24 P G B1514 17.681 -23.903 -41.328 1.00 46.05 P
ATOM 25 OP1 G B1514 16.957 -24.083 -42.603 1.00 54.86 O
ATOM 26 OP2 G B1514 18.130 -22.536 -40.940 1.00 37.31 O
ATOM 27 O5' G B1514 16.854 -24.550 -40.130 1.00 44.91 O
TER
ATOM 2 P G A1375 19.803 -15.683 -28.665 1.00 49.09 P
ATOM 3 OP1 G A1375 19.473 -15.411 -27.242 1.00 59.06 O
ATOM 4 OP2 G A1375 20.905 -14.930 -29.296 1.00 51.75 O
ATOM 5 O5' G A1375 20.026 -17.241 -28.898 1.00 50.68 O
ATOM 6 C5' G A1375 18.930 -18.142 -28.904 1.00 48.85 C
ATOM 7 C4' G A1375 19.262 -19.409 -29.658 1.00 47.02 C
ATOM 8 O4' G A1375 19.286 -19.147 -31.078 1.00 47.11 O
ATOM 9 C3' G A1375 20.608 -20.025 -29.351 1.00 41.36 C
ATOM 10 O3' G A1375 20.547 -20.888 -28.230 1.00 52.16 O
ATOM 11 C2' G A1375 20.990 -20.730 -30.658 1.00 39.49 C
ATOM 12 O2' G A1375 20.403 -22.017 -30.743 1.00 40.86 O
ATOM 13 C1' G A1375 20.332 -19.843 -31.699 1.00 38.02 C
ATOM 14 N9 G A1375 21.247 -18.843 -32.240 1.00 44.12 N
ATOM 15 C8 G A1375 21.477 -17.644 -31.611 1.00 46.66 C
ATOM 16 N7 G A1375 22.287 -16.897 -32.296 1.00 49.04 N
ATOM 17 C5 G A1375 22.575 -17.647 -33.427 1.00 39.75 C
ATOM 18 C6 G A1375 23.394 -17.331 -34.516 1.00 41.43 C
ATOM 19 O6 G A1375 24.037 -16.300 -34.688 1.00 59.61 O
ATOM 20 N1 G A1375 23.434 -18.338 -35.455 1.00 40.69 N
ATOM 21 C2 G A1375 22.758 -19.512 -35.353 1.00 41.88 C
ATOM 22 N2 G A1375 22.941 -20.344 -36.390 1.00 39.53 N
ATOM 23 N3 G A1375 21.978 -19.827 -34.331 1.00 38.77 N
ATOM 24 C4 G A1375 21.934 -18.850 -33.420 1.00 37.12 C
ATOM 25 P A A1376 21.871 -21.237 -27.404 1.00 65.28 P
ATOM 26 OP1 A A1376 22.639 -22.255 -28.200 1.00 53.01 O
ATOM 27 OP2 A A1376 21.446 -21.577 -26.030 1.00 57.31 O
ATOM 28 O5' A A1376 22.641 -19.858 -27.406 1.00 47.60 O
TER
ATOM 1 O3' A B1512 24.647 -22.280 -40.748 1.00 44.86 O
ATOM 2 P A B1513 23.229 -21.500 -40.729 1.00 43.57 P
ATOM 3 OP1 A B1513 23.059 -20.872 -42.073 1.00 28.67 O
ATOM 4 OP2 A B1513 23.228 -20.630 -39.534 1.00 46.79 O
ATOM 5 O5' A B1513 22.168 -22.683 -40.524 1.00 36.97 O
ATOM 6 C5' A B1513 22.032 -23.742 -41.475 1.00 39.80 C
ATOM 7 C4' A B1513 21.359 -24.954 -40.862 1.00 38.98 C
ATOM 8 O4' A B1513 22.074 -25.351 -39.663 1.00 39.26 O
ATOM 9 C3' A B1513 19.940 -24.748 -40.373 1.00 40.43 C
ATOM 10 O3' A B1513 18.974 -24.836 -41.398 1.00 39.62 O
ATOM 11 C2' A B1513 19.801 -25.813 -39.306 1.00 37.81 C
ATOM 12 O2' A B1513 19.645 -27.087 -39.890 1.00 47.86 O
ATOM 13 C1' A B1513 21.171 -25.755 -38.669 1.00 35.03 C
ATOM 14 N9 A B1513 21.214 -24.770 -37.592 1.00 36.16 N
ATOM 15 C8 A B1513 21.585 -23.461 -37.692 1.00 37.28 C
ATOM 16 N7 A B1513 21.512 -22.844 -36.537 1.00 40.46 N
ATOM 17 C5 A B1513 21.055 -23.799 -35.642 1.00 29.69 C
ATOM 18 C6 A B1513 20.769 -23.752 -34.279 1.00 26.77 C
ATOM 19 N6 A B1513 20.888 -22.677 -33.505 1.00 32.70 N
ATOM 20 N1 A B1513 20.346 -24.887 -33.726 1.00 33.70 N
ATOM 21 C2 A B1513 20.212 -25.979 -34.489 1.00 37.45 C
ATOM 22 N3 A B1513 20.433 -26.152 -35.780 1.00 29.08 N
ATOM 23 C4 A B1513 20.864 -24.999 -36.292 1.00 37.03 C
ATOM 24 P G B1514 17.681 -23.903 -41.328 1.00 46.05 P
ATOM 25 OP1 G B1514 16.957 -24.083 -42.603 1.00 54.86 O
ATOM 26 OP2 G B1514 18.130 -22.536 -40.940 1.00 37.31 O
ATOM 27 O5' G B1514 16.854 -24.550 -40.130 1.00 44.91 O
TER
Atoms:
OP1: (19.473,-15.411,-27.242)
OP2: (20.905,-14.930,-29.296)
C3': (20.608,-20.025,-29.351)
C1': (20.332,-19.843,-31.699)
C5': (18.930,-18.142,-28.904)
O6: (24.037,-16.300,-34.688)
O4': (19.286,-19.147,-31.078)
C8: (21.477,-17.644,-31.611)
C2: (22.758,-19.512,-35.353)
C6: (23.394,-17.331,-34.516)
C5: (22.575,-17.647,-33.427)
C4: (21.934,-18.850,-33.420)
P: (19.803,-15.683,-28.665)
C4': (19.262,-19.409,-29.658)
C2': (20.990,-20.730,-30.658)
O2': (20.403,-22.017,-30.743)
N1: (23.434,-18.338,-35.455)
N2: (22.941,-20.344,-36.390)
N3: (21.978,-19.827,-34.331)
N7: (22.287,-16.897,-32.296)
N9: (21.247,-18.843,-32.240)
O5': (20.026,-17.241,-28.898)
O3': (20.547,-20.888,-28.230)
OP2: (20.905,-14.930,-29.296)
C3': (20.608,-20.025,-29.351)
C1': (20.332,-19.843,-31.699)
C5': (18.930,-18.142,-28.904)
O6: (24.037,-16.300,-34.688)
O4': (19.286,-19.147,-31.078)
C8: (21.477,-17.644,-31.611)
C2: (22.758,-19.512,-35.353)
C6: (23.394,-17.331,-34.516)
C5: (22.575,-17.647,-33.427)
C4: (21.934,-18.850,-33.420)
P: (19.803,-15.683,-28.665)
C4': (19.262,-19.409,-29.658)
C2': (20.990,-20.730,-30.658)
O2': (20.403,-22.017,-30.743)
N1: (23.434,-18.338,-35.455)
N2: (22.941,-20.344,-36.390)
N3: (21.978,-19.827,-34.331)
N7: (22.287,-16.897,-32.296)
N9: (21.247,-18.843,-32.240)
O5': (20.026,-17.241,-28.898)
O3': (20.547,-20.888,-28.230)
OP1: (23.059,-20.872,-42.073)
OP2: (23.228,-20.630,-39.534)
C3': (19.940,-24.748,-40.373)
C1': (21.171,-25.755,-38.669)
C5': (22.032,-23.742,-41.475)
O4': (22.074,-25.351,-39.663)
C8: (21.585,-23.461,-37.692)
O2': (19.645,-27.087,-39.890)
C6: (20.769,-23.752,-34.279)
C5: (21.055,-23.799,-35.642)
C4: (20.864,-24.999,-36.292)
P: (23.229,-21.500,-40.729)
C4': (21.359,-24.954,-40.862)
C2': (19.801,-25.813,-39.306)
C2: (20.212,-25.979,-34.489)
N1: (20.346,-24.887,-33.726)
N3: (20.433,-26.152,-35.780)
N6: (20.888,-22.677,-33.505)
N7: (21.512,-22.844,-36.537)
N9: (21.214,-24.770,-37.592)
O5': (22.168,-22.683,-40.524)
O3': (18.974,-24.836,-41.398)
OP2: (23.228,-20.630,-39.534)
C3': (19.940,-24.748,-40.373)
C1': (21.171,-25.755,-38.669)
C5': (22.032,-23.742,-41.475)
O4': (22.074,-25.351,-39.663)
C8: (21.585,-23.461,-37.692)
O2': (19.645,-27.087,-39.890)
C6: (20.769,-23.752,-34.279)
C5: (21.055,-23.799,-35.642)
C4: (20.864,-24.999,-36.292)
P: (23.229,-21.500,-40.729)
C4': (21.359,-24.954,-40.862)
C2': (19.801,-25.813,-39.306)
C2: (20.212,-25.979,-34.489)
N1: (20.346,-24.887,-33.726)
N3: (20.433,-26.152,-35.780)
N6: (20.888,-22.677,-33.505)
N7: (21.512,-22.844,-36.537)
N9: (21.214,-24.770,-37.592)
O5': (22.168,-22.683,-40.524)
O3': (18.974,-24.836,-41.398)
Image (generated by PyMOL):