Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0686:0687
Extra
PDB:
ATOM 1 O3' G A 685 51.492 61.465 38.862 1.00 48.51 O
ATOM 2 P A A 686 49.978 61.637 38.327 1.00 47.79 P
ATOM 3 OP1 A A 686 49.474 60.272 38.059 1.00 51.49 O
ATOM 4 OP2 A A 686 49.904 62.657 37.260 1.00 49.16 O
ATOM 5 O5' A A 686 49.228 62.226 39.597 1.00 49.65 O
ATOM 6 C5' A A 686 47.881 61.857 39.935 1.00 49.13 C
ATOM 7 C4' A A 686 47.686 62.002 41.427 1.00 50.29 C
ATOM 8 O4' A A 686 48.126 63.319 41.835 1.00 48.91 O
ATOM 9 C3' A A 686 46.259 61.972 41.945 1.00 49.76 C
ATOM 10 O3' A A 686 45.805 60.625 42.069 1.00 50.84 O
ATOM 11 C2' A A 686 46.396 62.636 43.321 1.00 49.11 C
ATOM 12 O2' A A 686 46.726 61.728 44.352 1.00 49.81 O
ATOM 13 C1' A A 686 47.588 63.584 43.110 1.00 48.09 C
ATOM 14 N9 A A 686 47.325 65.018 43.257 1.00 45.26 N
ATOM 15 C8 A A 686 46.420 65.813 42.596 1.00 44.54 C
ATOM 16 N7 A A 686 46.384 67.049 43.033 1.00 42.98 N
ATOM 17 C5 A A 686 47.342 67.074 44.042 1.00 42.48 C
ATOM 18 C6 A A 686 47.775 68.093 44.924 1.00 39.84 C
ATOM 19 N6 A A 686 47.262 69.324 44.949 1.00 35.60 N
ATOM 20 N1 A A 686 48.759 67.789 45.796 1.00 40.04 N
ATOM 21 C2 A A 686 49.259 66.548 45.793 1.00 41.39 C
ATOM 22 N3 A A 686 48.926 65.507 45.033 1.00 42.92 N
ATOM 23 C4 A A 686 47.948 65.839 44.170 1.00 42.86 C
ATOM 24 P C A 687 44.268 60.261 41.769 1.00 54.22 P
ATOM 25 OP1 C A 687 44.101 58.812 42.045 1.00 55.30 O
ATOM 26 OP2 C A 687 43.903 60.802 40.432 1.00 55.37 O
ATOM 27 O5' C A 687 43.446 61.070 42.864 1.00 54.02 O
TER
ATOM 1 O3' A B 686 45.805 60.625 42.069 1.00 50.84 O
ATOM 2 P C B 687 44.268 60.261 41.769 1.00 54.22 P
ATOM 3 OP1 C B 687 44.101 58.812 42.045 1.00 55.30 O
ATOM 4 OP2 C B 687 43.903 60.802 40.432 1.00 55.37 O
ATOM 5 O5' C B 687 43.446 61.070 42.864 1.00 54.02 O
ATOM 6 C5' C B 687 42.063 61.411 42.657 1.00 54.39 C
ATOM 7 C4' C B 687 41.202 60.717 43.686 1.00 55.41 C
ATOM 8 O4' C B 687 41.750 60.922 45.005 1.00 55.02 O
ATOM 9 C3' C B 687 39.783 61.245 43.854 1.00 54.77 C
ATOM 10 O3' C B 687 38.900 60.608 42.937 1.00 53.28 O
ATOM 11 C2' C B 687 39.394 60.729 45.247 1.00 56.73 C
ATOM 12 O2' C B 687 38.739 59.471 45.184 1.00 60.39 O
ATOM 13 C1' C B 687 40.761 60.537 45.924 1.00 55.57 C
ATOM 14 N1 C B 687 40.996 61.177 47.226 1.00 54.50 N
ATOM 15 C2 C B 687 41.225 60.351 48.333 1.00 54.07 C
ATOM 16 O2 C B 687 41.229 59.121 48.176 1.00 53.78 O
ATOM 17 N3 C B 687 41.434 60.911 49.543 1.00 53.74 N
ATOM 18 C4 C B 687 41.422 62.237 49.674 1.00 53.63 C
ATOM 19 N4 C B 687 41.640 62.743 50.891 1.00 53.00 N
ATOM 20 C5 C B 687 41.189 63.104 48.564 1.00 52.05 C
ATOM 21 C6 C B 687 40.987 62.536 47.370 1.00 53.75 C
ATOM 22 P A B 688 38.720 61.164 41.446 1.00 51.55 P
ATOM 23 OP1 A B 688 39.047 60.014 40.572 1.00 51.65 O
ATOM 24 OP2 A B 688 39.421 62.451 41.247 1.00 55.22 O
ATOM 25 O5' A B 688 37.161 61.449 41.356 1.00 50.02 O
TER
ATOM 2 P A A 686 49.978 61.637 38.327 1.00 47.79 P
ATOM 3 OP1 A A 686 49.474 60.272 38.059 1.00 51.49 O
ATOM 4 OP2 A A 686 49.904 62.657 37.260 1.00 49.16 O
ATOM 5 O5' A A 686 49.228 62.226 39.597 1.00 49.65 O
ATOM 6 C5' A A 686 47.881 61.857 39.935 1.00 49.13 C
ATOM 7 C4' A A 686 47.686 62.002 41.427 1.00 50.29 C
ATOM 8 O4' A A 686 48.126 63.319 41.835 1.00 48.91 O
ATOM 9 C3' A A 686 46.259 61.972 41.945 1.00 49.76 C
ATOM 10 O3' A A 686 45.805 60.625 42.069 1.00 50.84 O
ATOM 11 C2' A A 686 46.396 62.636 43.321 1.00 49.11 C
ATOM 12 O2' A A 686 46.726 61.728 44.352 1.00 49.81 O
ATOM 13 C1' A A 686 47.588 63.584 43.110 1.00 48.09 C
ATOM 14 N9 A A 686 47.325 65.018 43.257 1.00 45.26 N
ATOM 15 C8 A A 686 46.420 65.813 42.596 1.00 44.54 C
ATOM 16 N7 A A 686 46.384 67.049 43.033 1.00 42.98 N
ATOM 17 C5 A A 686 47.342 67.074 44.042 1.00 42.48 C
ATOM 18 C6 A A 686 47.775 68.093 44.924 1.00 39.84 C
ATOM 19 N6 A A 686 47.262 69.324 44.949 1.00 35.60 N
ATOM 20 N1 A A 686 48.759 67.789 45.796 1.00 40.04 N
ATOM 21 C2 A A 686 49.259 66.548 45.793 1.00 41.39 C
ATOM 22 N3 A A 686 48.926 65.507 45.033 1.00 42.92 N
ATOM 23 C4 A A 686 47.948 65.839 44.170 1.00 42.86 C
ATOM 24 P C A 687 44.268 60.261 41.769 1.00 54.22 P
ATOM 25 OP1 C A 687 44.101 58.812 42.045 1.00 55.30 O
ATOM 26 OP2 C A 687 43.903 60.802 40.432 1.00 55.37 O
ATOM 27 O5' C A 687 43.446 61.070 42.864 1.00 54.02 O
TER
ATOM 1 O3' A B 686 45.805 60.625 42.069 1.00 50.84 O
ATOM 2 P C B 687 44.268 60.261 41.769 1.00 54.22 P
ATOM 3 OP1 C B 687 44.101 58.812 42.045 1.00 55.30 O
ATOM 4 OP2 C B 687 43.903 60.802 40.432 1.00 55.37 O
ATOM 5 O5' C B 687 43.446 61.070 42.864 1.00 54.02 O
ATOM 6 C5' C B 687 42.063 61.411 42.657 1.00 54.39 C
ATOM 7 C4' C B 687 41.202 60.717 43.686 1.00 55.41 C
ATOM 8 O4' C B 687 41.750 60.922 45.005 1.00 55.02 O
ATOM 9 C3' C B 687 39.783 61.245 43.854 1.00 54.77 C
ATOM 10 O3' C B 687 38.900 60.608 42.937 1.00 53.28 O
ATOM 11 C2' C B 687 39.394 60.729 45.247 1.00 56.73 C
ATOM 12 O2' C B 687 38.739 59.471 45.184 1.00 60.39 O
ATOM 13 C1' C B 687 40.761 60.537 45.924 1.00 55.57 C
ATOM 14 N1 C B 687 40.996 61.177 47.226 1.00 54.50 N
ATOM 15 C2 C B 687 41.225 60.351 48.333 1.00 54.07 C
ATOM 16 O2 C B 687 41.229 59.121 48.176 1.00 53.78 O
ATOM 17 N3 C B 687 41.434 60.911 49.543 1.00 53.74 N
ATOM 18 C4 C B 687 41.422 62.237 49.674 1.00 53.63 C
ATOM 19 N4 C B 687 41.640 62.743 50.891 1.00 53.00 N
ATOM 20 C5 C B 687 41.189 63.104 48.564 1.00 52.05 C
ATOM 21 C6 C B 687 40.987 62.536 47.370 1.00 53.75 C
ATOM 22 P A B 688 38.720 61.164 41.446 1.00 51.55 P
ATOM 23 OP1 A B 688 39.047 60.014 40.572 1.00 51.65 O
ATOM 24 OP2 A B 688 39.421 62.451 41.247 1.00 55.22 O
ATOM 25 O5' A B 688 37.161 61.449 41.356 1.00 50.02 O
TER
Atoms:
OP1: (49.474,60.272,38.059)
OP2: (49.904,62.657,37.260)
C3': (46.259,61.972,41.945)
C1': (47.588,63.584,43.110)
C5': (47.881,61.857,39.935)
O4': (48.126,63.319,41.835)
C8: (46.420,65.813,42.596)
O2': (46.726,61.728,44.352)
C6: (47.775,68.093,44.924)
C5: (47.342,67.074,44.042)
C4: (47.948,65.839,44.170)
P: (49.978,61.637,38.327)
C4': (47.686,62.002,41.427)
C2': (46.396,62.636,43.321)
C2: (49.259,66.548,45.793)
N1: (48.759,67.789,45.796)
N3: (48.926,65.507,45.033)
N6: (47.262,69.324,44.949)
N7: (46.384,67.049,43.033)
N9: (47.325,65.018,43.257)
O5': (49.228,62.226,39.597)
O3': (45.805,60.625,42.069)
OP2: (49.904,62.657,37.260)
C3': (46.259,61.972,41.945)
C1': (47.588,63.584,43.110)
C5': (47.881,61.857,39.935)
O4': (48.126,63.319,41.835)
C8: (46.420,65.813,42.596)
O2': (46.726,61.728,44.352)
C6: (47.775,68.093,44.924)
C5: (47.342,67.074,44.042)
C4: (47.948,65.839,44.170)
P: (49.978,61.637,38.327)
C4': (47.686,62.002,41.427)
C2': (46.396,62.636,43.321)
C2: (49.259,66.548,45.793)
N1: (48.759,67.789,45.796)
N3: (48.926,65.507,45.033)
N6: (47.262,69.324,44.949)
N7: (46.384,67.049,43.033)
N9: (47.325,65.018,43.257)
O5': (49.228,62.226,39.597)
O3': (45.805,60.625,42.069)
C2: (41.225,60.351,48.333)
OP1: (44.101,58.812,42.045)
OP2: (43.903,60.802,40.432)
C4: (41.422,62.237,49.674)
O5': (43.446,61.070,42.864)
C3': (39.783,61.245,43.854)
C1': (40.761,60.537,45.924)
O4': (41.750,60.922,45.005)
C5': (42.063,61.411,42.657)
P: (44.268,60.261,41.769)
O2: (41.229,59.121,48.176)
C4': (41.202,60.717,43.686)
C2': (39.394,60.729,45.247)
O2': (38.739,59.471,45.184)
N1: (40.996,61.177,47.226)
N3: (41.434,60.911,49.543)
N4: (41.640,62.743,50.891)
C6: (40.987,62.536,47.370)
C5: (41.189,63.104,48.564)
O3': (38.900,60.608,42.937)
OP1: (44.101,58.812,42.045)
OP2: (43.903,60.802,40.432)
C4: (41.422,62.237,49.674)
O5': (43.446,61.070,42.864)
C3': (39.783,61.245,43.854)
C1': (40.761,60.537,45.924)
O4': (41.750,60.922,45.005)
C5': (42.063,61.411,42.657)
P: (44.268,60.261,41.769)
O2: (41.229,59.121,48.176)
C4': (41.202,60.717,43.686)
C2': (39.394,60.729,45.247)
O2': (38.739,59.471,45.184)
N1: (40.996,61.177,47.226)
N3: (41.434,60.911,49.543)
N4: (41.640,62.743,50.891)
C6: (40.987,62.536,47.370)
C5: (41.189,63.104,48.564)
O3': (38.900,60.608,42.937)
Image (generated by PyMOL):