Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0686:0687
Extra
PDB:
ATOM 1 O3' G A 685 51.709 61.601 39.228 1.00 60.85 O
ATOM 2 P A A 686 50.213 61.653 38.617 1.00 62.25 P
ATOM 3 OP1 A A 686 49.696 60.264 38.719 1.00 63.06 O
ATOM 4 OP2 A A 686 50.193 62.348 37.302 1.00 62.19 O
ATOM 5 O5' A A 686 49.396 62.535 39.661 1.00 62.19 O
ATOM 6 C5' A A 686 48.087 62.141 40.116 1.00 62.24 C
ATOM 7 C4' A A 686 48.031 62.167 41.627 1.00 63.55 C
ATOM 8 O4' A A 686 48.453 63.466 42.106 1.00 63.40 O
ATOM 9 C3' A A 686 46.641 62.035 42.226 1.00 64.02 C
ATOM 10 O3' A A 686 46.270 60.656 42.278 1.00 66.77 O
ATOM 11 C2' A A 686 46.817 62.632 43.628 1.00 63.09 C
ATOM 12 O2' A A 686 47.253 61.697 44.591 1.00 63.43 O
ATOM 13 C1' A A 686 47.939 63.659 43.409 1.00 61.91 C
ATOM 14 N9 A A 686 47.608 65.078 43.602 1.00 60.01 N
ATOM 15 C8 A A 686 46.639 65.829 42.976 1.00 60.23 C
ATOM 16 N7 A A 686 46.580 67.073 43.394 1.00 58.81 N
ATOM 17 C5 A A 686 47.581 67.150 44.356 1.00 57.19 C
ATOM 18 C6 A A 686 48.024 68.199 45.176 1.00 54.79 C
ATOM 19 N6 A A 686 47.493 69.425 45.165 1.00 53.81 N
ATOM 20 N1 A A 686 49.043 67.945 46.018 1.00 52.12 N
ATOM 21 C2 A A 686 49.576 66.725 46.030 1.00 51.20 C
ATOM 22 N3 A A 686 49.251 65.659 45.317 1.00 54.09 N
ATOM 23 C4 A A 686 48.229 65.935 44.487 1.00 57.52 C
ATOM 24 P C A 687 44.756 60.215 41.970 1.00 68.40 P
ATOM 25 OP1 C A 687 44.684 58.732 42.060 1.00 69.65 O
ATOM 26 OP2 C A 687 44.320 60.892 40.723 1.00 68.95 O
ATOM 27 O5' C A 687 43.924 60.817 43.187 1.00 68.76 O
TER
ATOM 1 O3' A B 686 46.270 60.656 42.278 1.00 66.77 O
ATOM 2 P C B 687 44.756 60.215 41.970 1.00 68.40 P
ATOM 3 OP1 C B 687 44.684 58.732 42.060 1.00 69.65 O
ATOM 4 OP2 C B 687 44.320 60.892 40.723 1.00 68.95 O
ATOM 5 O5' C B 687 43.924 60.817 43.187 1.00 68.76 O
ATOM 6 C5' C B 687 42.590 61.316 42.992 1.00 67.79 C
ATOM 7 C4' C B 687 41.659 60.707 44.006 1.00 67.03 C
ATOM 8 O4' C B 687 42.108 61.012 45.339 1.00 66.42 O
ATOM 9 C3' C B 687 40.240 61.259 44.020 1.00 66.97 C
ATOM 10 O3' C B 687 39.447 60.535 43.081 1.00 65.56 O
ATOM 11 C2' C B 687 39.748 60.932 45.440 1.00 68.58 C
ATOM 12 O2' C B 687 38.961 59.756 45.486 1.00 72.92 O
ATOM 13 C1' C B 687 41.057 60.661 46.196 1.00 67.52 C
ATOM 14 N1 C B 687 41.232 61.293 47.512 1.00 66.05 N
ATOM 15 C2 C B 687 41.306 60.466 48.637 1.00 65.86 C
ATOM 16 O2 C B 687 41.238 59.235 48.487 1.00 66.12 O
ATOM 17 N3 C B 687 41.445 61.022 49.857 1.00 65.13 N
ATOM 18 C4 C B 687 41.514 62.344 49.982 1.00 64.17 C
ATOM 19 N4 C B 687 41.647 62.845 51.209 1.00 64.10 N
ATOM 20 C5 C B 687 41.449 63.211 48.855 1.00 64.97 C
ATOM 21 C6 C B 687 41.312 62.648 47.649 1.00 65.90 C
ATOM 22 P A B 688 38.951 61.224 41.719 1.00 64.67 P
ATOM 23 OP1 A B 688 39.240 60.235 40.649 1.00 64.87 O
ATOM 24 OP2 A B 688 39.470 62.601 41.595 1.00 66.62 O
ATOM 25 O5' A B 688 37.373 61.311 41.886 1.00 63.59 O
TER
ATOM 2 P A A 686 50.213 61.653 38.617 1.00 62.25 P
ATOM 3 OP1 A A 686 49.696 60.264 38.719 1.00 63.06 O
ATOM 4 OP2 A A 686 50.193 62.348 37.302 1.00 62.19 O
ATOM 5 O5' A A 686 49.396 62.535 39.661 1.00 62.19 O
ATOM 6 C5' A A 686 48.087 62.141 40.116 1.00 62.24 C
ATOM 7 C4' A A 686 48.031 62.167 41.627 1.00 63.55 C
ATOM 8 O4' A A 686 48.453 63.466 42.106 1.00 63.40 O
ATOM 9 C3' A A 686 46.641 62.035 42.226 1.00 64.02 C
ATOM 10 O3' A A 686 46.270 60.656 42.278 1.00 66.77 O
ATOM 11 C2' A A 686 46.817 62.632 43.628 1.00 63.09 C
ATOM 12 O2' A A 686 47.253 61.697 44.591 1.00 63.43 O
ATOM 13 C1' A A 686 47.939 63.659 43.409 1.00 61.91 C
ATOM 14 N9 A A 686 47.608 65.078 43.602 1.00 60.01 N
ATOM 15 C8 A A 686 46.639 65.829 42.976 1.00 60.23 C
ATOM 16 N7 A A 686 46.580 67.073 43.394 1.00 58.81 N
ATOM 17 C5 A A 686 47.581 67.150 44.356 1.00 57.19 C
ATOM 18 C6 A A 686 48.024 68.199 45.176 1.00 54.79 C
ATOM 19 N6 A A 686 47.493 69.425 45.165 1.00 53.81 N
ATOM 20 N1 A A 686 49.043 67.945 46.018 1.00 52.12 N
ATOM 21 C2 A A 686 49.576 66.725 46.030 1.00 51.20 C
ATOM 22 N3 A A 686 49.251 65.659 45.317 1.00 54.09 N
ATOM 23 C4 A A 686 48.229 65.935 44.487 1.00 57.52 C
ATOM 24 P C A 687 44.756 60.215 41.970 1.00 68.40 P
ATOM 25 OP1 C A 687 44.684 58.732 42.060 1.00 69.65 O
ATOM 26 OP2 C A 687 44.320 60.892 40.723 1.00 68.95 O
ATOM 27 O5' C A 687 43.924 60.817 43.187 1.00 68.76 O
TER
ATOM 1 O3' A B 686 46.270 60.656 42.278 1.00 66.77 O
ATOM 2 P C B 687 44.756 60.215 41.970 1.00 68.40 P
ATOM 3 OP1 C B 687 44.684 58.732 42.060 1.00 69.65 O
ATOM 4 OP2 C B 687 44.320 60.892 40.723 1.00 68.95 O
ATOM 5 O5' C B 687 43.924 60.817 43.187 1.00 68.76 O
ATOM 6 C5' C B 687 42.590 61.316 42.992 1.00 67.79 C
ATOM 7 C4' C B 687 41.659 60.707 44.006 1.00 67.03 C
ATOM 8 O4' C B 687 42.108 61.012 45.339 1.00 66.42 O
ATOM 9 C3' C B 687 40.240 61.259 44.020 1.00 66.97 C
ATOM 10 O3' C B 687 39.447 60.535 43.081 1.00 65.56 O
ATOM 11 C2' C B 687 39.748 60.932 45.440 1.00 68.58 C
ATOM 12 O2' C B 687 38.961 59.756 45.486 1.00 72.92 O
ATOM 13 C1' C B 687 41.057 60.661 46.196 1.00 67.52 C
ATOM 14 N1 C B 687 41.232 61.293 47.512 1.00 66.05 N
ATOM 15 C2 C B 687 41.306 60.466 48.637 1.00 65.86 C
ATOM 16 O2 C B 687 41.238 59.235 48.487 1.00 66.12 O
ATOM 17 N3 C B 687 41.445 61.022 49.857 1.00 65.13 N
ATOM 18 C4 C B 687 41.514 62.344 49.982 1.00 64.17 C
ATOM 19 N4 C B 687 41.647 62.845 51.209 1.00 64.10 N
ATOM 20 C5 C B 687 41.449 63.211 48.855 1.00 64.97 C
ATOM 21 C6 C B 687 41.312 62.648 47.649 1.00 65.90 C
ATOM 22 P A B 688 38.951 61.224 41.719 1.00 64.67 P
ATOM 23 OP1 A B 688 39.240 60.235 40.649 1.00 64.87 O
ATOM 24 OP2 A B 688 39.470 62.601 41.595 1.00 66.62 O
ATOM 25 O5' A B 688 37.373 61.311 41.886 1.00 63.59 O
TER
Atoms:
OP1: (49.696,60.264,38.719)
OP2: (50.193,62.348,37.302)
C3': (46.641,62.035,42.226)
C1': (47.939,63.659,43.409)
C5': (48.087,62.141,40.116)
O4': (48.453,63.466,42.106)
C8: (46.639,65.829,42.976)
O2': (47.253,61.697,44.591)
C6: (48.024,68.199,45.176)
C5: (47.581,67.150,44.356)
C4: (48.229,65.935,44.487)
P: (50.213,61.653,38.617)
C4': (48.031,62.167,41.627)
C2': (46.817,62.632,43.628)
C2: (49.576,66.725,46.030)
N1: (49.043,67.945,46.018)
N3: (49.251,65.659,45.317)
N6: (47.493,69.425,45.165)
N7: (46.580,67.073,43.394)
N9: (47.608,65.078,43.602)
O5': (49.396,62.535,39.661)
O3': (46.270,60.656,42.278)
OP2: (50.193,62.348,37.302)
C3': (46.641,62.035,42.226)
C1': (47.939,63.659,43.409)
C5': (48.087,62.141,40.116)
O4': (48.453,63.466,42.106)
C8: (46.639,65.829,42.976)
O2': (47.253,61.697,44.591)
C6: (48.024,68.199,45.176)
C5: (47.581,67.150,44.356)
C4: (48.229,65.935,44.487)
P: (50.213,61.653,38.617)
C4': (48.031,62.167,41.627)
C2': (46.817,62.632,43.628)
C2: (49.576,66.725,46.030)
N1: (49.043,67.945,46.018)
N3: (49.251,65.659,45.317)
N6: (47.493,69.425,45.165)
N7: (46.580,67.073,43.394)
N9: (47.608,65.078,43.602)
O5': (49.396,62.535,39.661)
O3': (46.270,60.656,42.278)
C2: (41.306,60.466,48.637)
OP1: (44.684,58.732,42.060)
OP2: (44.320,60.892,40.723)
C4: (41.514,62.344,49.982)
O5': (43.924,60.817,43.187)
C3': (40.240,61.259,44.020)
C1': (41.057,60.661,46.196)
O4': (42.108,61.012,45.339)
C5': (42.590,61.316,42.992)
P: (44.756,60.215,41.970)
O2: (41.238,59.235,48.487)
C4': (41.659,60.707,44.006)
C2': (39.748,60.932,45.440)
O2': (38.961,59.756,45.486)
N1: (41.232,61.293,47.512)
N3: (41.445,61.022,49.857)
N4: (41.647,62.845,51.209)
C6: (41.312,62.648,47.649)
C5: (41.449,63.211,48.855)
O3': (39.447,60.535,43.081)
OP1: (44.684,58.732,42.060)
OP2: (44.320,60.892,40.723)
C4: (41.514,62.344,49.982)
O5': (43.924,60.817,43.187)
C3': (40.240,61.259,44.020)
C1': (41.057,60.661,46.196)
O4': (42.108,61.012,45.339)
C5': (42.590,61.316,42.992)
P: (44.756,60.215,41.970)
O2: (41.238,59.235,48.487)
C4': (41.659,60.707,44.006)
C2': (39.748,60.932,45.440)
O2': (38.961,59.756,45.486)
N1: (41.232,61.293,47.512)
N3: (41.445,61.022,49.857)
N4: (41.647,62.845,51.209)
C6: (41.312,62.648,47.649)
C5: (41.449,63.211,48.855)
O3': (39.447,60.535,43.081)
Image (generated by PyMOL):