Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0686:0687
Extra
PDB:
ATOM 1 O3' G A 685 51.521 61.404 38.887 1.00 52.14 O
ATOM 2 P A A 686 50.014 61.533 38.313 1.00 52.40 P
ATOM 3 OP1 A A 686 49.523 60.148 38.160 1.00 53.40 O
ATOM 4 OP2 A A 686 49.935 62.456 37.156 1.00 51.62 O
ATOM 5 O5' A A 686 49.234 62.207 39.526 1.00 53.25 O
ATOM 6 C5' A A 686 47.890 61.826 39.878 1.00 54.28 C
ATOM 7 C4' A A 686 47.702 61.942 41.375 1.00 56.10 C
ATOM 8 O4' A A 686 48.114 63.258 41.806 1.00 56.54 O
ATOM 9 C3' A A 686 46.274 61.881 41.889 1.00 56.24 C
ATOM 10 O3' A A 686 45.853 60.524 41.994 1.00 57.26 O
ATOM 11 C2' A A 686 46.386 62.533 43.272 1.00 56.11 C
ATOM 12 O2' A A 686 46.715 61.617 44.292 1.00 55.61 O
ATOM 13 C1' A A 686 47.569 63.496 43.084 1.00 56.29 C
ATOM 14 N9 A A 686 47.310 64.930 43.247 1.00 56.41 N
ATOM 15 C8 A A 686 46.403 65.723 42.587 1.00 56.45 C
ATOM 16 N7 A A 686 46.392 66.970 43.001 1.00 57.04 N
ATOM 17 C5 A A 686 47.365 67.004 43.994 1.00 56.28 C
ATOM 18 C6 A A 686 47.836 68.039 44.831 1.00 54.65 C
ATOM 19 N6 A A 686 47.366 69.289 44.804 1.00 54.07 N
ATOM 20 N1 A A 686 48.818 67.739 45.707 1.00 52.63 N
ATOM 21 C2 A A 686 49.290 66.489 45.737 1.00 53.62 C
ATOM 22 N3 A A 686 48.930 65.433 45.011 1.00 55.38 N
ATOM 23 C4 A A 686 47.948 65.759 44.148 1.00 56.37 C
ATOM 24 P C A 687 44.334 60.127 41.667 1.00 58.28 P
ATOM 25 OP1 C A 687 44.245 58.650 41.736 1.00 59.73 O
ATOM 26 OP2 C A 687 43.923 60.831 40.423 1.00 57.93 O
ATOM 27 O5' C A 687 43.505 60.724 42.884 1.00 58.52 O
TER
ATOM 1 O3' A B 686 45.853 60.524 41.994 1.00 57.26 O
ATOM 2 P C B 687 44.334 60.127 41.667 1.00 58.28 P
ATOM 3 OP1 C B 687 44.245 58.650 41.736 1.00 59.73 O
ATOM 4 OP2 C B 687 43.923 60.831 40.423 1.00 57.93 O
ATOM 5 O5' C B 687 43.505 60.724 42.884 1.00 58.52 O
ATOM 6 C5' C B 687 42.154 61.172 42.704 1.00 59.12 C
ATOM 7 C4' C B 687 41.263 60.545 43.742 1.00 59.75 C
ATOM 8 O4' C B 687 41.804 60.791 45.058 1.00 58.89 O
ATOM 9 C3' C B 687 39.862 61.135 43.857 1.00 59.81 C
ATOM 10 O3' C B 687 38.968 60.510 42.926 1.00 59.60 O
ATOM 11 C2' C B 687 39.438 60.731 45.279 1.00 60.56 C
ATOM 12 O2' C B 687 38.714 59.516 45.317 1.00 63.38 O
ATOM 13 C1' C B 687 40.786 60.498 45.980 1.00 59.84 C
ATOM 14 N1 C B 687 41.034 61.184 47.257 1.00 58.56 N
ATOM 15 C2 C B 687 41.319 60.406 48.381 1.00 58.19 C
ATOM 16 O2 C B 687 41.385 59.175 48.260 1.00 59.26 O
ATOM 17 N3 C B 687 41.518 61.008 49.571 1.00 57.29 N
ATOM 18 C4 C B 687 41.451 62.333 49.663 1.00 57.74 C
ATOM 19 N4 C B 687 41.659 62.883 50.859 1.00 58.58 N
ATOM 20 C5 C B 687 41.173 63.154 48.534 1.00 57.94 C
ATOM 21 C6 C B 687 40.976 62.544 47.360 1.00 58.76 C
ATOM 22 P A B 688 38.776 61.101 41.442 1.00 58.85 P
ATOM 23 OP1 A B 688 39.079 59.995 40.505 1.00 58.48 O
ATOM 24 OP2 A B 688 39.490 62.388 41.304 1.00 61.14 O
ATOM 25 O5' A B 688 37.216 61.389 41.353 1.00 56.42 O
TER
ATOM 2 P A A 686 50.014 61.533 38.313 1.00 52.40 P
ATOM 3 OP1 A A 686 49.523 60.148 38.160 1.00 53.40 O
ATOM 4 OP2 A A 686 49.935 62.456 37.156 1.00 51.62 O
ATOM 5 O5' A A 686 49.234 62.207 39.526 1.00 53.25 O
ATOM 6 C5' A A 686 47.890 61.826 39.878 1.00 54.28 C
ATOM 7 C4' A A 686 47.702 61.942 41.375 1.00 56.10 C
ATOM 8 O4' A A 686 48.114 63.258 41.806 1.00 56.54 O
ATOM 9 C3' A A 686 46.274 61.881 41.889 1.00 56.24 C
ATOM 10 O3' A A 686 45.853 60.524 41.994 1.00 57.26 O
ATOM 11 C2' A A 686 46.386 62.533 43.272 1.00 56.11 C
ATOM 12 O2' A A 686 46.715 61.617 44.292 1.00 55.61 O
ATOM 13 C1' A A 686 47.569 63.496 43.084 1.00 56.29 C
ATOM 14 N9 A A 686 47.310 64.930 43.247 1.00 56.41 N
ATOM 15 C8 A A 686 46.403 65.723 42.587 1.00 56.45 C
ATOM 16 N7 A A 686 46.392 66.970 43.001 1.00 57.04 N
ATOM 17 C5 A A 686 47.365 67.004 43.994 1.00 56.28 C
ATOM 18 C6 A A 686 47.836 68.039 44.831 1.00 54.65 C
ATOM 19 N6 A A 686 47.366 69.289 44.804 1.00 54.07 N
ATOM 20 N1 A A 686 48.818 67.739 45.707 1.00 52.63 N
ATOM 21 C2 A A 686 49.290 66.489 45.737 1.00 53.62 C
ATOM 22 N3 A A 686 48.930 65.433 45.011 1.00 55.38 N
ATOM 23 C4 A A 686 47.948 65.759 44.148 1.00 56.37 C
ATOM 24 P C A 687 44.334 60.127 41.667 1.00 58.28 P
ATOM 25 OP1 C A 687 44.245 58.650 41.736 1.00 59.73 O
ATOM 26 OP2 C A 687 43.923 60.831 40.423 1.00 57.93 O
ATOM 27 O5' C A 687 43.505 60.724 42.884 1.00 58.52 O
TER
ATOM 1 O3' A B 686 45.853 60.524 41.994 1.00 57.26 O
ATOM 2 P C B 687 44.334 60.127 41.667 1.00 58.28 P
ATOM 3 OP1 C B 687 44.245 58.650 41.736 1.00 59.73 O
ATOM 4 OP2 C B 687 43.923 60.831 40.423 1.00 57.93 O
ATOM 5 O5' C B 687 43.505 60.724 42.884 1.00 58.52 O
ATOM 6 C5' C B 687 42.154 61.172 42.704 1.00 59.12 C
ATOM 7 C4' C B 687 41.263 60.545 43.742 1.00 59.75 C
ATOM 8 O4' C B 687 41.804 60.791 45.058 1.00 58.89 O
ATOM 9 C3' C B 687 39.862 61.135 43.857 1.00 59.81 C
ATOM 10 O3' C B 687 38.968 60.510 42.926 1.00 59.60 O
ATOM 11 C2' C B 687 39.438 60.731 45.279 1.00 60.56 C
ATOM 12 O2' C B 687 38.714 59.516 45.317 1.00 63.38 O
ATOM 13 C1' C B 687 40.786 60.498 45.980 1.00 59.84 C
ATOM 14 N1 C B 687 41.034 61.184 47.257 1.00 58.56 N
ATOM 15 C2 C B 687 41.319 60.406 48.381 1.00 58.19 C
ATOM 16 O2 C B 687 41.385 59.175 48.260 1.00 59.26 O
ATOM 17 N3 C B 687 41.518 61.008 49.571 1.00 57.29 N
ATOM 18 C4 C B 687 41.451 62.333 49.663 1.00 57.74 C
ATOM 19 N4 C B 687 41.659 62.883 50.859 1.00 58.58 N
ATOM 20 C5 C B 687 41.173 63.154 48.534 1.00 57.94 C
ATOM 21 C6 C B 687 40.976 62.544 47.360 1.00 58.76 C
ATOM 22 P A B 688 38.776 61.101 41.442 1.00 58.85 P
ATOM 23 OP1 A B 688 39.079 59.995 40.505 1.00 58.48 O
ATOM 24 OP2 A B 688 39.490 62.388 41.304 1.00 61.14 O
ATOM 25 O5' A B 688 37.216 61.389 41.353 1.00 56.42 O
TER
Atoms:
OP1: (49.523,60.148,38.160)
OP2: (49.935,62.456,37.156)
C3': (46.274,61.881,41.889)
C1': (47.569,63.496,43.084)
C5': (47.890,61.826,39.878)
O4': (48.114,63.258,41.806)
C8: (46.403,65.723,42.587)
O2': (46.715,61.617,44.292)
C6: (47.836,68.039,44.831)
C5: (47.365,67.004,43.994)
C4: (47.948,65.759,44.148)
P: (50.014,61.533,38.313)
C4': (47.702,61.942,41.375)
C2': (46.386,62.533,43.272)
C2: (49.290,66.489,45.737)
N1: (48.818,67.739,45.707)
N3: (48.930,65.433,45.011)
N6: (47.366,69.289,44.804)
N7: (46.392,66.970,43.001)
N9: (47.310,64.930,43.247)
O5': (49.234,62.207,39.526)
O3': (45.853,60.524,41.994)
OP2: (49.935,62.456,37.156)
C3': (46.274,61.881,41.889)
C1': (47.569,63.496,43.084)
C5': (47.890,61.826,39.878)
O4': (48.114,63.258,41.806)
C8: (46.403,65.723,42.587)
O2': (46.715,61.617,44.292)
C6: (47.836,68.039,44.831)
C5: (47.365,67.004,43.994)
C4: (47.948,65.759,44.148)
P: (50.014,61.533,38.313)
C4': (47.702,61.942,41.375)
C2': (46.386,62.533,43.272)
C2: (49.290,66.489,45.737)
N1: (48.818,67.739,45.707)
N3: (48.930,65.433,45.011)
N6: (47.366,69.289,44.804)
N7: (46.392,66.970,43.001)
N9: (47.310,64.930,43.247)
O5': (49.234,62.207,39.526)
O3': (45.853,60.524,41.994)
C2: (41.319,60.406,48.381)
OP1: (44.245,58.650,41.736)
OP2: (43.923,60.831,40.423)
C4: (41.451,62.333,49.663)
O5': (43.505,60.724,42.884)
C3': (39.862,61.135,43.857)
C1': (40.786,60.498,45.980)
O4': (41.804,60.791,45.058)
C5': (42.154,61.172,42.704)
P: (44.334,60.127,41.667)
O2: (41.385,59.175,48.260)
C4': (41.263,60.545,43.742)
C2': (39.438,60.731,45.279)
O2': (38.714,59.516,45.317)
N1: (41.034,61.184,47.257)
N3: (41.518,61.008,49.571)
N4: (41.659,62.883,50.859)
C6: (40.976,62.544,47.360)
C5: (41.173,63.154,48.534)
O3': (38.968,60.510,42.926)
OP1: (44.245,58.650,41.736)
OP2: (43.923,60.831,40.423)
C4: (41.451,62.333,49.663)
O5': (43.505,60.724,42.884)
C3': (39.862,61.135,43.857)
C1': (40.786,60.498,45.980)
O4': (41.804,60.791,45.058)
C5': (42.154,61.172,42.704)
P: (44.334,60.127,41.667)
O2: (41.385,59.175,48.260)
C4': (41.263,60.545,43.742)
C2': (39.438,60.731,45.279)
O2': (38.714,59.516,45.317)
N1: (41.034,61.184,47.257)
N3: (41.518,61.008,49.571)
N4: (41.659,62.883,50.859)
C6: (40.976,62.544,47.360)
C5: (41.173,63.154,48.534)
O3': (38.968,60.510,42.926)
Image (generated by PyMOL):