Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:0686:0687
Extra
PDB:
ATOM 1 O3' G A 685 51.276 61.367 38.725 1.00 39.24 O
ATOM 2 P A A 686 49.772 61.567 38.172 1.00 38.78 P
ATOM 3 OP1 A A 686 49.244 60.210 37.923 1.00 39.87 O
ATOM 4 OP2 A A 686 49.728 62.572 37.081 1.00 38.04 O
ATOM 5 O5' A A 686 49.024 62.180 39.434 1.00 38.43 O
ATOM 6 C5' A A 686 47.723 61.734 39.837 1.00 39.39 C
ATOM 7 C4' A A 686 47.603 61.811 41.338 1.00 41.20 C
ATOM 8 O4' A A 686 48.079 63.097 41.788 1.00 42.11 O
ATOM 9 C3' A A 686 46.192 61.782 41.891 1.00 42.19 C
ATOM 10 O3' A A 686 45.732 60.437 41.962 1.00 44.75 O
ATOM 11 C2' A A 686 46.378 62.380 43.287 1.00 42.86 C
ATOM 12 O2' A A 686 46.770 61.420 44.241 1.00 43.63 O
ATOM 13 C1' A A 686 47.556 63.344 43.074 1.00 42.83 C
ATOM 14 N9 A A 686 47.280 64.777 43.226 1.00 43.28 N
ATOM 15 C8 A A 686 46.387 65.558 42.536 1.00 44.04 C
ATOM 16 N7 A A 686 46.350 66.805 42.943 1.00 44.89 N
ATOM 17 C5 A A 686 47.289 66.852 43.966 1.00 43.98 C
ATOM 18 C6 A A 686 47.720 67.892 44.814 1.00 42.45 C
ATOM 19 N6 A A 686 47.231 69.135 44.777 1.00 42.05 N
ATOM 20 N1 A A 686 48.678 67.606 45.717 1.00 41.11 N
ATOM 21 C2 A A 686 49.163 66.364 45.767 1.00 41.59 C
ATOM 22 N3 A A 686 48.837 65.304 45.037 1.00 44.05 N
ATOM 23 C4 A A 686 47.881 65.616 44.142 1.00 43.88 C
ATOM 24 P C A 687 44.220 60.081 41.560 1.00 46.98 P
ATOM 25 OP1 C A 687 44.120 58.601 41.517 1.00 47.74 O
ATOM 26 OP2 C A 687 43.851 60.873 40.363 1.00 47.14 O
ATOM 27 O5' C A 687 43.365 60.606 42.794 1.00 46.50 O
TER
ATOM 1 O3' A B 686 45.732 60.437 41.962 1.00 44.75 O
ATOM 2 P C B 687 44.220 60.081 41.560 1.00 46.98 P
ATOM 3 OP1 C B 687 44.120 58.601 41.517 1.00 47.74 O
ATOM 4 OP2 C B 687 43.851 60.873 40.363 1.00 47.14 O
ATOM 5 O5' C B 687 43.365 60.606 42.794 1.00 46.50 O
ATOM 6 C5' C B 687 42.024 61.100 42.619 1.00 45.95 C
ATOM 7 C4' C B 687 41.130 60.531 43.688 1.00 45.60 C
ATOM 8 O4' C B 687 41.676 60.813 44.991 1.00 45.06 O
ATOM 9 C3' C B 687 39.735 61.129 43.817 1.00 44.98 C
ATOM 10 O3' C B 687 38.825 60.476 42.941 1.00 45.27 O
ATOM 11 C2' C B 687 39.328 60.738 45.244 1.00 45.91 C
ATOM 12 O2' C B 687 38.572 59.543 45.283 1.00 47.67 O
ATOM 13 C1' C B 687 40.683 60.465 45.914 1.00 44.97 C
ATOM 14 N1 C B 687 40.944 61.079 47.223 1.00 42.54 N
ATOM 15 C2 C B 687 41.271 60.243 48.285 1.00 41.98 C
ATOM 16 O2 C B 687 41.395 59.030 48.076 1.00 42.67 O
ATOM 17 N3 C B 687 41.447 60.769 49.511 1.00 41.82 N
ATOM 18 C4 C B 687 41.322 62.078 49.696 1.00 41.77 C
ATOM 19 N4 C B 687 41.494 62.551 50.930 1.00 43.05 N
ATOM 20 C5 C B 687 41.015 62.962 48.625 1.00 41.64 C
ATOM 21 C6 C B 687 40.842 62.426 47.415 1.00 42.36 C
ATOM 22 P A B 688 38.715 60.912 41.404 1.00 44.93 P
ATOM 23 OP1 A B 688 38.963 59.679 40.619 1.00 45.10 O
ATOM 24 OP2 A B 688 39.545 62.109 41.156 1.00 47.82 O
ATOM 25 O5' A B 688 37.179 61.300 41.236 1.00 43.11 O
TER
ATOM 2 P A A 686 49.772 61.567 38.172 1.00 38.78 P
ATOM 3 OP1 A A 686 49.244 60.210 37.923 1.00 39.87 O
ATOM 4 OP2 A A 686 49.728 62.572 37.081 1.00 38.04 O
ATOM 5 O5' A A 686 49.024 62.180 39.434 1.00 38.43 O
ATOM 6 C5' A A 686 47.723 61.734 39.837 1.00 39.39 C
ATOM 7 C4' A A 686 47.603 61.811 41.338 1.00 41.20 C
ATOM 8 O4' A A 686 48.079 63.097 41.788 1.00 42.11 O
ATOM 9 C3' A A 686 46.192 61.782 41.891 1.00 42.19 C
ATOM 10 O3' A A 686 45.732 60.437 41.962 1.00 44.75 O
ATOM 11 C2' A A 686 46.378 62.380 43.287 1.00 42.86 C
ATOM 12 O2' A A 686 46.770 61.420 44.241 1.00 43.63 O
ATOM 13 C1' A A 686 47.556 63.344 43.074 1.00 42.83 C
ATOM 14 N9 A A 686 47.280 64.777 43.226 1.00 43.28 N
ATOM 15 C8 A A 686 46.387 65.558 42.536 1.00 44.04 C
ATOM 16 N7 A A 686 46.350 66.805 42.943 1.00 44.89 N
ATOM 17 C5 A A 686 47.289 66.852 43.966 1.00 43.98 C
ATOM 18 C6 A A 686 47.720 67.892 44.814 1.00 42.45 C
ATOM 19 N6 A A 686 47.231 69.135 44.777 1.00 42.05 N
ATOM 20 N1 A A 686 48.678 67.606 45.717 1.00 41.11 N
ATOM 21 C2 A A 686 49.163 66.364 45.767 1.00 41.59 C
ATOM 22 N3 A A 686 48.837 65.304 45.037 1.00 44.05 N
ATOM 23 C4 A A 686 47.881 65.616 44.142 1.00 43.88 C
ATOM 24 P C A 687 44.220 60.081 41.560 1.00 46.98 P
ATOM 25 OP1 C A 687 44.120 58.601 41.517 1.00 47.74 O
ATOM 26 OP2 C A 687 43.851 60.873 40.363 1.00 47.14 O
ATOM 27 O5' C A 687 43.365 60.606 42.794 1.00 46.50 O
TER
ATOM 1 O3' A B 686 45.732 60.437 41.962 1.00 44.75 O
ATOM 2 P C B 687 44.220 60.081 41.560 1.00 46.98 P
ATOM 3 OP1 C B 687 44.120 58.601 41.517 1.00 47.74 O
ATOM 4 OP2 C B 687 43.851 60.873 40.363 1.00 47.14 O
ATOM 5 O5' C B 687 43.365 60.606 42.794 1.00 46.50 O
ATOM 6 C5' C B 687 42.024 61.100 42.619 1.00 45.95 C
ATOM 7 C4' C B 687 41.130 60.531 43.688 1.00 45.60 C
ATOM 8 O4' C B 687 41.676 60.813 44.991 1.00 45.06 O
ATOM 9 C3' C B 687 39.735 61.129 43.817 1.00 44.98 C
ATOM 10 O3' C B 687 38.825 60.476 42.941 1.00 45.27 O
ATOM 11 C2' C B 687 39.328 60.738 45.244 1.00 45.91 C
ATOM 12 O2' C B 687 38.572 59.543 45.283 1.00 47.67 O
ATOM 13 C1' C B 687 40.683 60.465 45.914 1.00 44.97 C
ATOM 14 N1 C B 687 40.944 61.079 47.223 1.00 42.54 N
ATOM 15 C2 C B 687 41.271 60.243 48.285 1.00 41.98 C
ATOM 16 O2 C B 687 41.395 59.030 48.076 1.00 42.67 O
ATOM 17 N3 C B 687 41.447 60.769 49.511 1.00 41.82 N
ATOM 18 C4 C B 687 41.322 62.078 49.696 1.00 41.77 C
ATOM 19 N4 C B 687 41.494 62.551 50.930 1.00 43.05 N
ATOM 20 C5 C B 687 41.015 62.962 48.625 1.00 41.64 C
ATOM 21 C6 C B 687 40.842 62.426 47.415 1.00 42.36 C
ATOM 22 P A B 688 38.715 60.912 41.404 1.00 44.93 P
ATOM 23 OP1 A B 688 38.963 59.679 40.619 1.00 45.10 O
ATOM 24 OP2 A B 688 39.545 62.109 41.156 1.00 47.82 O
ATOM 25 O5' A B 688 37.179 61.300 41.236 1.00 43.11 O
TER
Atoms:
OP1: (49.244,60.210,37.923)
OP2: (49.728,62.572,37.081)
C3': (46.192,61.782,41.891)
C1': (47.556,63.344,43.074)
C5': (47.723,61.734,39.837)
O4': (48.079,63.097,41.788)
C8: (46.387,65.558,42.536)
O2': (46.770,61.420,44.241)
C6: (47.720,67.892,44.814)
C5: (47.289,66.852,43.966)
C4: (47.881,65.616,44.142)
P: (49.772,61.567,38.172)
C4': (47.603,61.811,41.338)
C2': (46.378,62.380,43.287)
C2: (49.163,66.364,45.767)
N1: (48.678,67.606,45.717)
N3: (48.837,65.304,45.037)
N6: (47.231,69.135,44.777)
N7: (46.350,66.805,42.943)
N9: (47.280,64.777,43.226)
O5': (49.024,62.180,39.434)
O3': (45.732,60.437,41.962)
OP2: (49.728,62.572,37.081)
C3': (46.192,61.782,41.891)
C1': (47.556,63.344,43.074)
C5': (47.723,61.734,39.837)
O4': (48.079,63.097,41.788)
C8: (46.387,65.558,42.536)
O2': (46.770,61.420,44.241)
C6: (47.720,67.892,44.814)
C5: (47.289,66.852,43.966)
C4: (47.881,65.616,44.142)
P: (49.772,61.567,38.172)
C4': (47.603,61.811,41.338)
C2': (46.378,62.380,43.287)
C2: (49.163,66.364,45.767)
N1: (48.678,67.606,45.717)
N3: (48.837,65.304,45.037)
N6: (47.231,69.135,44.777)
N7: (46.350,66.805,42.943)
N9: (47.280,64.777,43.226)
O5': (49.024,62.180,39.434)
O3': (45.732,60.437,41.962)
C2: (41.271,60.243,48.285)
OP1: (44.120,58.601,41.517)
OP2: (43.851,60.873,40.363)
C4: (41.322,62.078,49.696)
O5': (43.365,60.606,42.794)
C3': (39.735,61.129,43.817)
C1': (40.683,60.465,45.914)
O4': (41.676,60.813,44.991)
C5': (42.024,61.100,42.619)
P: (44.220,60.081,41.560)
O2: (41.395,59.030,48.076)
C4': (41.130,60.531,43.688)
C2': (39.328,60.738,45.244)
O2': (38.572,59.543,45.283)
N1: (40.944,61.079,47.223)
N3: (41.447,60.769,49.511)
N4: (41.494,62.551,50.930)
C6: (40.842,62.426,47.415)
C5: (41.015,62.962,48.625)
O3': (38.825,60.476,42.941)
OP1: (44.120,58.601,41.517)
OP2: (43.851,60.873,40.363)
C4: (41.322,62.078,49.696)
O5': (43.365,60.606,42.794)
C3': (39.735,61.129,43.817)
C1': (40.683,60.465,45.914)
O4': (41.676,60.813,44.991)
C5': (42.024,61.100,42.619)
P: (44.220,60.081,41.560)
O2: (41.395,59.030,48.076)
C4': (41.130,60.531,43.688)
C2': (39.328,60.738,45.244)
O2': (38.572,59.543,45.283)
N1: (40.944,61.079,47.223)
N3: (41.447,60.769,49.511)
N4: (41.494,62.551,50.930)
C6: (40.842,62.426,47.415)
C5: (41.015,62.962,48.625)
O3': (38.825,60.476,42.941)
Image (generated by PyMOL):