Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2472:A2471
Extra
PDB:
ATOM 1 O3' A A2471 -104.039 -54.555 -43.714 1.00 4.33 O
ATOM 2 P U A2472 -103.924 -54.765 -42.127 1.00 0.01 P
ATOM 3 OP1 U A2472 -102.735 -55.602 -41.896 1.00 0.01 O
ATOM 4 OP2 U A2472 -105.224 -55.240 -41.636 1.00 0.01 O
ATOM 5 O5' U A2472 -103.669 -53.311 -41.595 1.00 0.01 O
ATOM 6 C5' U A2472 -102.662 -52.507 -42.167 1.00 0.01 C
ATOM 7 C4' U A2472 -102.701 -51.135 -41.597 1.00 0.01 C
ATOM 8 O4' U A2472 -103.612 -50.322 -42.358 1.00 0.01 O
ATOM 9 C3' U A2472 -103.220 -51.065 -40.196 1.00 0.01 C
ATOM 10 O3' U A2472 -102.218 -51.341 -39.268 1.00 0.01 O
ATOM 11 C2' U A2472 -103.750 -49.661 -40.114 1.00 0.01 C
ATOM 12 O2' U A2472 -102.696 -48.743 -39.974 1.00 0.01 O
ATOM 13 C1' U A2472 -104.347 -49.503 -41.496 1.00 0.01 C
ATOM 14 N1 U A2472 -105.725 -49.955 -41.523 1.00 0.21 N
ATOM 15 C2 U A2472 -106.652 -49.091 -41.072 1.00 0.21 C
ATOM 16 O2 U A2472 -106.319 -47.999 -40.701 1.00 0.21 O
ATOM 17 N3 U A2472 -107.929 -49.556 -41.071 1.00 0.21 N
ATOM 18 C4 U A2472 -108.361 -50.799 -41.482 1.00 0.21 C
ATOM 19 O4 U A2472 -109.566 -51.106 -41.455 1.00 0.21 O
ATOM 20 C5 U A2472 -107.306 -51.647 -41.926 1.00 0.21 C
ATOM 21 C6 U A2472 -106.048 -51.207 -41.923 1.00 0.21 C
ATOM 22 P C A2473 -102.586 -51.758 -37.772 1.00 0.01 P
ATOM 23 OP1 C A2473 -101.298 -52.018 -37.091 1.00 0.01 O
ATOM 24 OP2 C A2473 -103.595 -52.842 -37.845 1.00 0.01 O
ATOM 25 O5' C A2473 -103.261 -50.453 -37.184 1.00 0.01 O
TER
ATOM 1 O3' U B2470 -109.216 -55.149 -42.237 1.00 6.46 O
ATOM 2 P A B2471 -108.945 -55.776 -43.659 1.00 4.33 P
ATOM 3 OP1 A B2471 -110.082 -55.403 -44.534 1.00 4.33 O
ATOM 4 OP2 A B2471 -108.647 -57.208 -43.454 1.00 4.33 O
ATOM 5 O5' A B2471 -107.644 -55.000 -44.110 1.00 4.33 O
ATOM 6 C5' A B2471 -106.786 -55.522 -45.097 1.00 4.33 C
ATOM 7 C4' A B2471 -105.745 -54.520 -45.455 1.00 4.33 C
ATOM 8 O4' A B2471 -106.363 -53.463 -46.217 1.00 4.33 O
ATOM 9 C3' A B2471 -105.106 -53.815 -44.275 1.00 4.33 C
ATOM 10 O3' A B2471 -104.039 -54.555 -43.714 1.00 4.33 O
ATOM 11 C2' A B2471 -104.687 -52.469 -44.859 1.00 4.33 C
ATOM 12 O2' A B2471 -103.423 -52.549 -45.499 1.00 4.33 O
ATOM 13 C1' A B2471 -105.757 -52.229 -45.918 1.00 4.33 C
ATOM 14 N9 A B2471 -106.777 -51.303 -45.434 1.00 2.94 N
ATOM 15 C8 A B2471 -108.088 -51.478 -45.065 1.00 2.94 C
ATOM 16 N7 A B2471 -108.646 -50.373 -44.635 1.00 2.94 N
ATOM 17 C5 A B2471 -107.616 -49.445 -44.745 1.00 2.94 C
ATOM 18 C6 A B2471 -107.539 -48.098 -44.443 1.00 2.94 C
ATOM 19 N6 A B2471 -108.577 -47.415 -43.954 1.00 2.94 N
ATOM 20 N1 A B2471 -106.356 -47.488 -44.637 1.00 2.94 N
ATOM 21 C2 A B2471 -105.339 -48.199 -45.107 1.00 2.94 C
ATOM 22 N3 A B2471 -105.286 -49.479 -45.433 1.00 2.94 N
ATOM 23 C4 A B2471 -106.471 -50.016 -45.219 1.00 2.94 C
ATOM 24 P U B2472 -103.924 -54.765 -42.127 1.00 0.01 P
ATOM 25 OP1 U B2472 -102.735 -55.602 -41.896 1.00 0.01 O
ATOM 26 OP2 U B2472 -105.224 -55.240 -41.636 1.00 0.01 O
ATOM 27 O5' U B2472 -103.669 -53.311 -41.595 1.00 0.01 O
TER
ATOM 2 P U A2472 -103.924 -54.765 -42.127 1.00 0.01 P
ATOM 3 OP1 U A2472 -102.735 -55.602 -41.896 1.00 0.01 O
ATOM 4 OP2 U A2472 -105.224 -55.240 -41.636 1.00 0.01 O
ATOM 5 O5' U A2472 -103.669 -53.311 -41.595 1.00 0.01 O
ATOM 6 C5' U A2472 -102.662 -52.507 -42.167 1.00 0.01 C
ATOM 7 C4' U A2472 -102.701 -51.135 -41.597 1.00 0.01 C
ATOM 8 O4' U A2472 -103.612 -50.322 -42.358 1.00 0.01 O
ATOM 9 C3' U A2472 -103.220 -51.065 -40.196 1.00 0.01 C
ATOM 10 O3' U A2472 -102.218 -51.341 -39.268 1.00 0.01 O
ATOM 11 C2' U A2472 -103.750 -49.661 -40.114 1.00 0.01 C
ATOM 12 O2' U A2472 -102.696 -48.743 -39.974 1.00 0.01 O
ATOM 13 C1' U A2472 -104.347 -49.503 -41.496 1.00 0.01 C
ATOM 14 N1 U A2472 -105.725 -49.955 -41.523 1.00 0.21 N
ATOM 15 C2 U A2472 -106.652 -49.091 -41.072 1.00 0.21 C
ATOM 16 O2 U A2472 -106.319 -47.999 -40.701 1.00 0.21 O
ATOM 17 N3 U A2472 -107.929 -49.556 -41.071 1.00 0.21 N
ATOM 18 C4 U A2472 -108.361 -50.799 -41.482 1.00 0.21 C
ATOM 19 O4 U A2472 -109.566 -51.106 -41.455 1.00 0.21 O
ATOM 20 C5 U A2472 -107.306 -51.647 -41.926 1.00 0.21 C
ATOM 21 C6 U A2472 -106.048 -51.207 -41.923 1.00 0.21 C
ATOM 22 P C A2473 -102.586 -51.758 -37.772 1.00 0.01 P
ATOM 23 OP1 C A2473 -101.298 -52.018 -37.091 1.00 0.01 O
ATOM 24 OP2 C A2473 -103.595 -52.842 -37.845 1.00 0.01 O
ATOM 25 O5' C A2473 -103.261 -50.453 -37.184 1.00 0.01 O
TER
ATOM 1 O3' U B2470 -109.216 -55.149 -42.237 1.00 6.46 O
ATOM 2 P A B2471 -108.945 -55.776 -43.659 1.00 4.33 P
ATOM 3 OP1 A B2471 -110.082 -55.403 -44.534 1.00 4.33 O
ATOM 4 OP2 A B2471 -108.647 -57.208 -43.454 1.00 4.33 O
ATOM 5 O5' A B2471 -107.644 -55.000 -44.110 1.00 4.33 O
ATOM 6 C5' A B2471 -106.786 -55.522 -45.097 1.00 4.33 C
ATOM 7 C4' A B2471 -105.745 -54.520 -45.455 1.00 4.33 C
ATOM 8 O4' A B2471 -106.363 -53.463 -46.217 1.00 4.33 O
ATOM 9 C3' A B2471 -105.106 -53.815 -44.275 1.00 4.33 C
ATOM 10 O3' A B2471 -104.039 -54.555 -43.714 1.00 4.33 O
ATOM 11 C2' A B2471 -104.687 -52.469 -44.859 1.00 4.33 C
ATOM 12 O2' A B2471 -103.423 -52.549 -45.499 1.00 4.33 O
ATOM 13 C1' A B2471 -105.757 -52.229 -45.918 1.00 4.33 C
ATOM 14 N9 A B2471 -106.777 -51.303 -45.434 1.00 2.94 N
ATOM 15 C8 A B2471 -108.088 -51.478 -45.065 1.00 2.94 C
ATOM 16 N7 A B2471 -108.646 -50.373 -44.635 1.00 2.94 N
ATOM 17 C5 A B2471 -107.616 -49.445 -44.745 1.00 2.94 C
ATOM 18 C6 A B2471 -107.539 -48.098 -44.443 1.00 2.94 C
ATOM 19 N6 A B2471 -108.577 -47.415 -43.954 1.00 2.94 N
ATOM 20 N1 A B2471 -106.356 -47.488 -44.637 1.00 2.94 N
ATOM 21 C2 A B2471 -105.339 -48.199 -45.107 1.00 2.94 C
ATOM 22 N3 A B2471 -105.286 -49.479 -45.433 1.00 2.94 N
ATOM 23 C4 A B2471 -106.471 -50.016 -45.219 1.00 2.94 C
ATOM 24 P U B2472 -103.924 -54.765 -42.127 1.00 0.01 P
ATOM 25 OP1 U B2472 -102.735 -55.602 -41.896 1.00 0.01 O
ATOM 26 OP2 U B2472 -105.224 -55.240 -41.636 1.00 0.01 O
ATOM 27 O5' U B2472 -103.669 -53.311 -41.595 1.00 0.01 O
TER
Atoms:
C4: (-108.361,-50.799,-41.482)
N3: (-107.929,-49.556,-41.071)
OP1: (-102.735,-55.602,-41.896)
OP2: (-105.224,-55.240,-41.636)
C2: (-106.652,-49.091,-41.072)
C1': (-104.347,-49.503,-41.496)
C3': (-103.220,-51.065,-40.196)
O5': (-103.669,-53.311,-41.595)
O4': (-103.612,-50.322,-42.358)
C5': (-102.662,-52.507,-42.167)
P: (-103.924,-54.765,-42.127)
C4': (-102.701,-51.135,-41.597)
C2': (-103.750,-49.661,-40.114)
O2': (-102.696,-48.743,-39.974)
N1: (-105.725,-49.955,-41.523)
O4: (-109.566,-51.106,-41.455)
O2: (-106.319,-47.999,-40.701)
C6: (-106.048,-51.207,-41.923)
C5: (-107.306,-51.647,-41.926)
O3': (-102.218,-51.341,-39.268)
N3: (-107.929,-49.556,-41.071)
OP1: (-102.735,-55.602,-41.896)
OP2: (-105.224,-55.240,-41.636)
C2: (-106.652,-49.091,-41.072)
C1': (-104.347,-49.503,-41.496)
C3': (-103.220,-51.065,-40.196)
O5': (-103.669,-53.311,-41.595)
O4': (-103.612,-50.322,-42.358)
C5': (-102.662,-52.507,-42.167)
P: (-103.924,-54.765,-42.127)
C4': (-102.701,-51.135,-41.597)
C2': (-103.750,-49.661,-40.114)
O2': (-102.696,-48.743,-39.974)
N1: (-105.725,-49.955,-41.523)
O4: (-109.566,-51.106,-41.455)
O2: (-106.319,-47.999,-40.701)
C6: (-106.048,-51.207,-41.923)
C5: (-107.306,-51.647,-41.926)
O3': (-102.218,-51.341,-39.268)
OP1: (-110.082,-55.403,-44.534)
OP2: (-108.647,-57.208,-43.454)
C3': (-105.106,-53.815,-44.275)
C1': (-105.757,-52.229,-45.918)
C5': (-106.786,-55.522,-45.097)
O4': (-106.363,-53.463,-46.217)
C8: (-108.088,-51.478,-45.065)
O2': (-103.423,-52.549,-45.499)
C6: (-107.539,-48.098,-44.443)
C5: (-107.616,-49.445,-44.745)
C4: (-106.471,-50.016,-45.219)
P: (-108.945,-55.776,-43.659)
C4': (-105.745,-54.520,-45.455)
C2': (-104.687,-52.469,-44.859)
C2: (-105.339,-48.199,-45.107)
N1: (-106.356,-47.488,-44.637)
N3: (-105.286,-49.479,-45.433)
N6: (-108.577,-47.415,-43.954)
N7: (-108.646,-50.373,-44.635)
N9: (-106.777,-51.303,-45.434)
O5': (-107.644,-55.000,-44.110)
O3': (-104.039,-54.555,-43.714)
OP2: (-108.647,-57.208,-43.454)
C3': (-105.106,-53.815,-44.275)
C1': (-105.757,-52.229,-45.918)
C5': (-106.786,-55.522,-45.097)
O4': (-106.363,-53.463,-46.217)
C8: (-108.088,-51.478,-45.065)
O2': (-103.423,-52.549,-45.499)
C6: (-107.539,-48.098,-44.443)
C5: (-107.616,-49.445,-44.745)
C4: (-106.471,-50.016,-45.219)
P: (-108.945,-55.776,-43.659)
C4': (-105.745,-54.520,-45.455)
C2': (-104.687,-52.469,-44.859)
C2: (-105.339,-48.199,-45.107)
N1: (-106.356,-47.488,-44.637)
N3: (-105.286,-49.479,-45.433)
N6: (-108.577,-47.415,-43.954)
N7: (-108.646,-50.373,-44.635)
N9: (-106.777,-51.303,-45.434)
O5': (-107.644,-55.000,-44.110)
O3': (-104.039,-54.555,-43.714)
Image (generated by PyMOL):