Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A1280:A1588
Extra
PDB:
ATOM 1 O3' G A1279 37.974 -71.654 -9.998 1.00 37.54 O
ATOM 2 P G A1280 38.804 -70.297 -9.664 1.00 36.42 P
ATOM 3 OP1 G A1280 38.162 -69.535 -8.553 1.00 37.30 O
ATOM 4 OP2 G A1280 39.007 -69.615 -10.973 1.00 35.85 O
ATOM 5 O5' G A1280 40.175 -70.814 -9.052 1.00 41.49 O
ATOM 6 C5' G A1280 40.183 -71.835 -8.068 1.00 38.60 C
ATOM 7 C4' G A1280 41.173 -72.889 -8.456 1.00 45.93 C
ATOM 8 O4' G A1280 42.494 -72.275 -8.499 1.00 48.80 O
ATOM 9 C3' G A1280 41.266 -74.092 -7.530 1.00 41.10 C
ATOM 10 O3' G A1280 41.385 -75.271 -8.333 1.00 34.89 O
ATOM 11 C2' G A1280 42.521 -73.787 -6.707 1.00 39.96 C
ATOM 12 O2' G A1280 43.185 -74.951 -6.288 1.00 42.53 O
ATOM 13 C1' G A1280 43.388 -73.025 -7.707 1.00 47.10 C
ATOM 14 N9 G A1280 44.417 -72.135 -7.152 1.00 49.14 N
ATOM 15 C8 G A1280 44.253 -70.840 -6.715 1.00 46.71 C
ATOM 16 N7 G A1280 45.371 -70.278 -6.334 1.00 46.60 N
ATOM 17 C5 G A1280 46.340 -71.262 -6.515 1.00 53.48 C
ATOM 18 C6 G A1280 47.768 -71.229 -6.292 1.00 56.02 C
ATOM 19 O6 G A1280 48.481 -70.280 -5.914 1.00 50.25 O
ATOM 20 N1 G A1280 48.360 -72.456 -6.588 1.00 52.51 N
ATOM 21 C2 G A1280 47.696 -73.559 -7.064 1.00 49.87 C
ATOM 22 N2 G A1280 48.457 -74.642 -7.295 1.00 47.72 N
ATOM 23 N3 G A1280 46.385 -73.600 -7.299 1.00 52.30 N
ATOM 24 C4 G A1280 45.771 -72.424 -7.001 1.00 51.40 C
ATOM 25 P U A1281 40.569 -76.611 -7.942 1.00 41.47 P
ATOM 26 OP1 U A1281 41.225 -77.748 -8.622 1.00 36.45 O
ATOM 27 OP2 U A1281 39.109 -76.404 -8.136 1.00 44.73 O
ATOM 28 O5' U A1281 40.810 -76.753 -6.371 1.00 41.45 O
TER
ATOM 1 O3' G B1587 38.669 -71.287 -3.828 1.00 51.53 O
ATOM 2 P C B1588 40.095 -70.635 -3.511 1.00 48.24 P
ATOM 3 OP1 C B1588 40.156 -69.223 -4.021 1.00 42.91 O
ATOM 4 OP2 C B1588 41.101 -71.616 -3.970 1.00 48.15 O
ATOM 5 O5' C B1588 40.105 -70.586 -1.921 1.00 42.72 O
ATOM 6 C5' C B1588 40.640 -71.669 -1.179 1.00 47.17 C
ATOM 7 C4' C B1588 39.555 -72.645 -0.838 1.00 49.02 C
ATOM 8 O4' C B1588 39.979 -73.961 -1.253 1.00 40.57 O
ATOM 9 C3' C B1588 39.235 -72.759 0.650 1.00 46.61 C
ATOM 10 O3' C B1588 38.281 -71.769 1.058 1.00 42.73 O
ATOM 11 C2' C B1588 38.745 -74.199 0.763 1.00 46.07 C
ATOM 12 O2' C B1588 37.387 -74.385 0.405 1.00 46.94 O
ATOM 13 C1' C B1588 39.637 -74.910 -0.260 1.00 41.99 C
ATOM 14 N1 C B1588 40.899 -75.391 0.338 1.00 46.42 N
ATOM 15 C2 C B1588 40.907 -76.583 1.086 1.00 46.03 C
ATOM 16 O2 C B1588 39.860 -77.225 1.199 1.00 43.27 O
ATOM 17 N3 C B1588 42.068 -76.994 1.661 1.00 46.78 N
ATOM 18 C4 C B1588 43.183 -76.259 1.520 1.00 43.56 C
ATOM 19 N4 C B1588 44.302 -76.675 2.128 1.00 46.20 N
ATOM 20 C5 C B1588 43.204 -75.060 0.753 1.00 40.25 C
ATOM 21 C6 C B1588 42.055 -74.669 0.183 1.00 45.45 C
ATOM 22 P G B1589 37.989 -71.527 2.615 1.00 43.93 P
ATOM 23 OP1 G B1589 36.708 -70.779 2.729 1.00 45.51 O
ATOM 24 OP2 G B1589 39.225 -70.958 3.218 1.00 49.11 O
ATOM 25 O5' G B1589 37.748 -73.004 3.160 1.00 46.38 O
TER
ATOM 2 P G A1280 38.804 -70.297 -9.664 1.00 36.42 P
ATOM 3 OP1 G A1280 38.162 -69.535 -8.553 1.00 37.30 O
ATOM 4 OP2 G A1280 39.007 -69.615 -10.973 1.00 35.85 O
ATOM 5 O5' G A1280 40.175 -70.814 -9.052 1.00 41.49 O
ATOM 6 C5' G A1280 40.183 -71.835 -8.068 1.00 38.60 C
ATOM 7 C4' G A1280 41.173 -72.889 -8.456 1.00 45.93 C
ATOM 8 O4' G A1280 42.494 -72.275 -8.499 1.00 48.80 O
ATOM 9 C3' G A1280 41.266 -74.092 -7.530 1.00 41.10 C
ATOM 10 O3' G A1280 41.385 -75.271 -8.333 1.00 34.89 O
ATOM 11 C2' G A1280 42.521 -73.787 -6.707 1.00 39.96 C
ATOM 12 O2' G A1280 43.185 -74.951 -6.288 1.00 42.53 O
ATOM 13 C1' G A1280 43.388 -73.025 -7.707 1.00 47.10 C
ATOM 14 N9 G A1280 44.417 -72.135 -7.152 1.00 49.14 N
ATOM 15 C8 G A1280 44.253 -70.840 -6.715 1.00 46.71 C
ATOM 16 N7 G A1280 45.371 -70.278 -6.334 1.00 46.60 N
ATOM 17 C5 G A1280 46.340 -71.262 -6.515 1.00 53.48 C
ATOM 18 C6 G A1280 47.768 -71.229 -6.292 1.00 56.02 C
ATOM 19 O6 G A1280 48.481 -70.280 -5.914 1.00 50.25 O
ATOM 20 N1 G A1280 48.360 -72.456 -6.588 1.00 52.51 N
ATOM 21 C2 G A1280 47.696 -73.559 -7.064 1.00 49.87 C
ATOM 22 N2 G A1280 48.457 -74.642 -7.295 1.00 47.72 N
ATOM 23 N3 G A1280 46.385 -73.600 -7.299 1.00 52.30 N
ATOM 24 C4 G A1280 45.771 -72.424 -7.001 1.00 51.40 C
ATOM 25 P U A1281 40.569 -76.611 -7.942 1.00 41.47 P
ATOM 26 OP1 U A1281 41.225 -77.748 -8.622 1.00 36.45 O
ATOM 27 OP2 U A1281 39.109 -76.404 -8.136 1.00 44.73 O
ATOM 28 O5' U A1281 40.810 -76.753 -6.371 1.00 41.45 O
TER
ATOM 1 O3' G B1587 38.669 -71.287 -3.828 1.00 51.53 O
ATOM 2 P C B1588 40.095 -70.635 -3.511 1.00 48.24 P
ATOM 3 OP1 C B1588 40.156 -69.223 -4.021 1.00 42.91 O
ATOM 4 OP2 C B1588 41.101 -71.616 -3.970 1.00 48.15 O
ATOM 5 O5' C B1588 40.105 -70.586 -1.921 1.00 42.72 O
ATOM 6 C5' C B1588 40.640 -71.669 -1.179 1.00 47.17 C
ATOM 7 C4' C B1588 39.555 -72.645 -0.838 1.00 49.02 C
ATOM 8 O4' C B1588 39.979 -73.961 -1.253 1.00 40.57 O
ATOM 9 C3' C B1588 39.235 -72.759 0.650 1.00 46.61 C
ATOM 10 O3' C B1588 38.281 -71.769 1.058 1.00 42.73 O
ATOM 11 C2' C B1588 38.745 -74.199 0.763 1.00 46.07 C
ATOM 12 O2' C B1588 37.387 -74.385 0.405 1.00 46.94 O
ATOM 13 C1' C B1588 39.637 -74.910 -0.260 1.00 41.99 C
ATOM 14 N1 C B1588 40.899 -75.391 0.338 1.00 46.42 N
ATOM 15 C2 C B1588 40.907 -76.583 1.086 1.00 46.03 C
ATOM 16 O2 C B1588 39.860 -77.225 1.199 1.00 43.27 O
ATOM 17 N3 C B1588 42.068 -76.994 1.661 1.00 46.78 N
ATOM 18 C4 C B1588 43.183 -76.259 1.520 1.00 43.56 C
ATOM 19 N4 C B1588 44.302 -76.675 2.128 1.00 46.20 N
ATOM 20 C5 C B1588 43.204 -75.060 0.753 1.00 40.25 C
ATOM 21 C6 C B1588 42.055 -74.669 0.183 1.00 45.45 C
ATOM 22 P G B1589 37.989 -71.527 2.615 1.00 43.93 P
ATOM 23 OP1 G B1589 36.708 -70.779 2.729 1.00 45.51 O
ATOM 24 OP2 G B1589 39.225 -70.958 3.218 1.00 49.11 O
ATOM 25 O5' G B1589 37.748 -73.004 3.160 1.00 46.38 O
TER
Atoms:
OP1: (38.162,-69.535,-8.553)
OP2: (39.007,-69.615,-10.973)
C3': (41.266,-74.092,-7.530)
C1': (43.388,-73.025,-7.707)
C5': (40.183,-71.835,-8.068)
O6: (48.481,-70.280,-5.914)
O4': (42.494,-72.275,-8.499)
C8: (44.253,-70.840,-6.715)
C2: (47.696,-73.559,-7.064)
C6: (47.768,-71.229,-6.292)
C5: (46.340,-71.262,-6.515)
C4: (45.771,-72.424,-7.001)
P: (38.804,-70.297,-9.664)
C4': (41.173,-72.889,-8.456)
C2': (42.521,-73.787,-6.707)
O2': (43.185,-74.951,-6.288)
N1: (48.360,-72.456,-6.588)
N2: (48.457,-74.642,-7.295)
N3: (46.385,-73.600,-7.299)
N7: (45.371,-70.278,-6.334)
N9: (44.417,-72.135,-7.152)
O5': (40.175,-70.814,-9.052)
O3': (41.385,-75.271,-8.333)
OP2: (39.007,-69.615,-10.973)
C3': (41.266,-74.092,-7.530)
C1': (43.388,-73.025,-7.707)
C5': (40.183,-71.835,-8.068)
O6: (48.481,-70.280,-5.914)
O4': (42.494,-72.275,-8.499)
C8: (44.253,-70.840,-6.715)
C2: (47.696,-73.559,-7.064)
C6: (47.768,-71.229,-6.292)
C5: (46.340,-71.262,-6.515)
C4: (45.771,-72.424,-7.001)
P: (38.804,-70.297,-9.664)
C4': (41.173,-72.889,-8.456)
C2': (42.521,-73.787,-6.707)
O2': (43.185,-74.951,-6.288)
N1: (48.360,-72.456,-6.588)
N2: (48.457,-74.642,-7.295)
N3: (46.385,-73.600,-7.299)
N7: (45.371,-70.278,-6.334)
N9: (44.417,-72.135,-7.152)
O5': (40.175,-70.814,-9.052)
O3': (41.385,-75.271,-8.333)
C2: (40.907,-76.583,1.086)
OP1: (40.156,-69.223,-4.021)
OP2: (41.101,-71.616,-3.970)
C4: (43.183,-76.259,1.520)
O5': (40.105,-70.586,-1.921)
C3': (39.235,-72.759,0.650)
C1': (39.637,-74.910,-0.260)
O4': (39.979,-73.961,-1.253)
C5': (40.640,-71.669,-1.179)
P: (40.095,-70.635,-3.511)
O2: (39.860,-77.225,1.199)
C4': (39.555,-72.645,-0.838)
C2': (38.745,-74.199,0.763)
O2': (37.387,-74.385,0.405)
N1: (40.899,-75.391,0.338)
N3: (42.068,-76.994,1.661)
N4: (44.302,-76.675,2.128)
C6: (42.055,-74.669,0.183)
C5: (43.204,-75.060,0.753)
O3': (38.281,-71.769,1.058)
OP1: (40.156,-69.223,-4.021)
OP2: (41.101,-71.616,-3.970)
C4: (43.183,-76.259,1.520)
O5': (40.105,-70.586,-1.921)
C3': (39.235,-72.759,0.650)
C1': (39.637,-74.910,-0.260)
O4': (39.979,-73.961,-1.253)
C5': (40.640,-71.669,-1.179)
P: (40.095,-70.635,-3.511)
O2: (39.860,-77.225,1.199)
C4': (39.555,-72.645,-0.838)
C2': (38.745,-74.199,0.763)
O2': (37.387,-74.385,0.405)
N1: (40.899,-75.391,0.338)
N3: (42.068,-76.994,1.661)
N4: (44.302,-76.675,2.128)
C6: (42.055,-74.669,0.183)
C5: (43.204,-75.060,0.753)
O3': (38.281,-71.769,1.058)
Image (generated by PyMOL):