ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J00:A1394:A1455

Extra

PDB:
ATOM 1 O3' G A1393 -19.887 94.634 116.065 1.00 24.76 O
ATOM 2 P G A1394 -19.127 93.855 117.235 1.00 29.54 P
ATOM 3 OP1 G A1394 -17.932 94.673 117.587 1.00 33.25 O
ATOM 4 OP2 G A1394 -18.943 92.471 116.760 1.00 33.38 O
ATOM 5 O5' G A1394 -20.170 93.866 118.444 1.00 6.91 O
ATOM 6 C5' G A1394 -20.402 95.080 119.172 1.00 10.92 C
ATOM 7 C4' G A1394 -21.650 94.988 120.018 1.00 14.11 C
ATOM 8 O4' G A1394 -22.778 94.558 119.222 1.00 13.94 O
ATOM 9 C3' G A1394 -21.620 94.025 121.185 1.00 16.73 C
ATOM 10 O3' G A1394 -20.987 94.636 122.313 1.00 21.45 O
ATOM 11 C2' G A1394 -23.107 93.774 121.426 1.00 15.59 C
ATOM 12 O2' G A1394 -23.731 94.869 122.076 1.00 15.60 O
ATOM 13 C1' G A1394 -23.651 93.762 120.004 1.00 14.08 C
ATOM 14 N9 G A1394 -23.721 92.439 119.386 1.00 28.80 N
ATOM 15 C8 G A1394 -22.858 91.962 118.441 1.00 28.75 C
ATOM 16 N7 G A1394 -23.203 90.797 117.974 1.00 28.55 N
ATOM 17 C5 G A1394 -24.352 90.471 118.665 1.00 28.20 C
ATOM 18 C6 G A1394 -25.177 89.351 118.544 1.00 28.92 C
ATOM 19 O6 G A1394 -25.077 88.403 117.748 1.00 29.65 O
ATOM 20 N1 G A1394 -26.227 89.393 119.445 1.00 28.96 N
ATOM 21 C2 G A1394 -26.462 90.403 120.328 1.00 29.15 C
ATOM 22 N2 G A1394 -27.542 90.249 121.113 1.00 29.25 N
ATOM 23 N3 G A1394 -25.703 91.481 120.434 1.00 28.08 N
ATOM 24 C4 G A1394 -24.671 91.450 119.572 1.00 27.95 C
ATOM 25 P A A1395 -19.762 93.892 123.043 1.00 31.34 P
ATOM 26 OP1 A A1395 -18.502 94.516 122.544 1.00 23.48 O
ATOM 27 OP2 A A1395 -19.962 92.436 122.899 1.00 23.48 O
ATOM 28 O5' A A1395 -19.985 94.208 124.586 1.00 12.62 O
TER

ATOM 1 O3' G B1454 -30.335 87.142 123.802 1.00 18.23 O
ATOM 2 P A B1455 -31.261 88.049 122.872 1.00 16.87 P
ATOM 3 OP1 A B1455 -32.540 87.362 122.596 1.00 0.79 O
ATOM 4 OP2 A B1455 -30.396 88.517 121.747 1.00 0.79 O
ATOM 5 O5' A B1455 -31.646 89.277 123.797 1.00 32.05 O
ATOM 6 C5' A B1455 -32.463 89.084 124.960 1.00 29.05 C
ATOM 7 C4' A B1455 -32.445 90.329 125.799 1.00 26.95 C
ATOM 8 O4' A B1455 -31.082 90.605 126.218 1.00 26.70 O
ATOM 9 C3' A B1455 -32.873 91.563 125.034 1.00 25.29 C
ATOM 10 O3' A B1455 -34.289 91.699 125.075 1.00 23.34 O
ATOM 11 C2' A B1455 -32.153 92.673 125.779 1.00 25.40 C
ATOM 12 O2' A B1455 -32.855 92.996 126.962 1.00 25.29 O
ATOM 13 C1' A B1455 -30.838 91.991 126.157 1.00 26.03 C
ATOM 14 N9 A B1455 -29.761 92.207 125.197 1.00 4.91 N
ATOM 15 C8 A B1455 -29.661 91.707 123.926 1.00 4.91 C
ATOM 16 N7 A B1455 -28.566 92.061 123.300 1.00 4.91 N
ATOM 17 C5 A B1455 -27.898 92.846 124.223 1.00 4.91 C
ATOM 18 C6 A B1455 -26.661 93.523 124.174 1.00 4.91 C
ATOM 19 N6 A B1455 -25.833 93.488 123.129 1.00 4.91 N
ATOM 20 N1 A B1455 -26.297 94.241 125.258 1.00 4.91 N
ATOM 21 C2 A B1455 -27.119 94.262 126.315 1.00 4.91 C
ATOM 22 N3 A B1455 -28.291 93.652 126.487 1.00 4.91 N
ATOM 23 C4 A B1455 -28.628 92.953 125.392 1.00 4.91 C
ATOM 24 P C B1456 -35.102 91.937 123.711 1.00 37.70 P
ATOM 25 OP1 C B1456 -36.472 92.381 124.092 1.00 52.55 O
ATOM 26 OP2 C B1456 -34.928 90.719 122.880 1.00 51.35 O
ATOM 27 O5' C B1456 -34.344 93.160 123.017 1.00 3.62 O
TER

Atoms:
OP1: (-17.932,94.673,117.587)
OP2: (-18.943,92.471,116.760)
C3': (-21.620,94.025,121.185)
C1': (-23.651,93.762,120.004)
C5': (-20.402,95.080,119.172)
O6: (-25.077,88.403,117.748)
O4': (-22.778,94.558,119.222)
C8: (-22.858,91.962,118.441)
C2: (-26.462,90.403,120.328)
C6: (-25.177,89.351,118.544)
C5: (-24.352,90.471,118.665)
C4: (-24.671,91.450,119.572)
P: (-19.127,93.855,117.235)
C4': (-21.650,94.988,120.018)
C2': (-23.107,93.774,121.426)
O2': (-23.731,94.869,122.076)
N1: (-26.227,89.393,119.445)
N2: (-27.542,90.249,121.113)
N3: (-25.703,91.481,120.434)
N7: (-23.203,90.797,117.974)
N9: (-23.721,92.439,119.386)
O5': (-20.170,93.866,118.444)
O3': (-20.987,94.636,122.313)
OP1: (-32.540,87.362,122.596)
OP2: (-30.396,88.517,121.747)
C3': (-32.873,91.563,125.034)
C1': (-30.838,91.991,126.157)
C5': (-32.463,89.084,124.960)
O4': (-31.082,90.605,126.218)
C8: (-29.661,91.707,123.926)
O2': (-32.855,92.996,126.962)
C6: (-26.661,93.523,124.174)
C5: (-27.898,92.846,124.223)
C4: (-28.628,92.953,125.392)
P: (-31.261,88.049,122.872)
C4': (-32.445,90.329,125.799)
C2': (-32.153,92.673,125.779)
C2: (-27.119,94.262,126.315)
N1: (-26.297,94.241,125.258)
N3: (-28.291,93.652,126.487)
N6: (-25.833,93.488,123.129)
N7: (-28.566,92.061,123.300)
N9: (-29.761,92.207,125.197)
O5': (-31.646,89.277,123.797)
O3': (-34.289,91.699,125.075)
Image (generated by PyMOL):
PyMOL image
show in jmol