ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YI2:01348:01351

Extra

PDB:
ATOM 1 O3' U A1347 46.008 187.824 74.992 1.00 53.60 O
ATOM 2 P G A1348 44.408 187.787 75.096 1.00 54.33 P
ATOM 3 OP1 G A1348 43.907 188.103 73.723 1.00 54.26 O
ATOM 4 OP2 G A1348 43.955 188.595 76.251 1.00 52.76 O
ATOM 5 O5' G A1348 44.075 186.265 75.424 1.00 54.87 O
ATOM 6 C5' G A1348 44.296 185.233 74.447 1.00 54.45 C
ATOM 7 C4' G A1348 44.112 183.881 75.079 1.00 54.89 C
ATOM 8 O4' G A1348 45.058 183.735 76.170 1.00 55.37 O
ATOM 9 C3' G A1348 42.759 183.661 75.730 1.00 55.41 C
ATOM 10 O3' G A1348 41.799 183.251 74.761 1.00 57.34 O
ATOM 11 C2' G A1348 43.068 182.571 76.745 1.00 54.46 C
ATOM 12 O2' G A1348 43.160 181.300 76.141 1.00 56.89 O
ATOM 13 C1' G A1348 44.460 182.992 77.220 1.00 54.44 C
ATOM 14 N9 G A1348 44.417 183.830 78.413 1.00 54.84 N
ATOM 15 C8 G A1348 44.308 185.197 78.465 1.00 53.09 C
ATOM 16 N7 G A1348 44.246 185.658 79.683 1.00 53.49 N
ATOM 17 C5 G A1348 44.326 184.528 80.483 1.00 54.23 C
ATOM 18 C6 G A1348 44.290 184.398 81.893 1.00 54.81 C
ATOM 19 O6 G A1348 44.156 185.282 82.746 1.00 55.77 O
ATOM 20 N1 G A1348 44.419 183.073 82.287 1.00 56.56 N
ATOM 21 C2 G A1348 44.553 182.004 81.435 1.00 56.62 C
ATOM 22 N2 G A1348 44.680 180.796 82.011 1.00 55.89 N
ATOM 23 N3 G A1348 44.567 182.111 80.118 1.00 56.69 N
ATOM 24 C4 G A1348 44.451 183.394 79.715 1.00 55.33 C
ATOM 25 P A A1349 40.261 183.700 74.913 1.00 57.03 P
ATOM 26 OP1 A A1349 39.539 183.201 73.713 1.00 56.17 O
ATOM 27 OP2 A A1349 40.234 185.144 75.242 1.00 57.43 O
ATOM 28 O5' A A1349 39.736 182.915 76.192 1.00 54.90 O
TER

ATOM 1 O3' G B1350 41.841 178.993 84.045 1.00 52.10 O
ATOM 2 P A B1351 42.882 179.929 84.850 1.00 55.36 P
ATOM 3 OP1 A B1351 42.678 179.625 86.295 1.00 52.24 O
ATOM 4 OP2 A B1351 42.778 181.343 84.378 1.00 54.01 O
ATOM 5 O5' A B1351 44.315 179.372 84.420 1.00 53.75 O
ATOM 6 C5' A B1351 44.601 177.967 84.487 1.00 51.03 C
ATOM 7 C4' A B1351 46.083 177.732 84.615 1.00 50.69 C
ATOM 8 O4' A B1351 46.740 178.075 83.361 1.00 50.61 O
ATOM 9 C3' A B1351 46.803 178.522 85.708 1.00 50.57 C
ATOM 10 O3' A B1351 47.749 177.683 86.352 1.00 52.37 O
ATOM 11 C2' A B1351 47.558 179.587 84.915 1.00 50.60 C
ATOM 12 O2' A B1351 48.751 180.007 85.540 1.00 50.37 O
ATOM 13 C1' A B1351 47.905 178.817 83.647 1.00 50.52 C
ATOM 14 N9 A B1351 48.265 179.633 82.484 1.00 49.87 N
ATOM 15 C8 A B1351 47.982 180.955 82.236 1.00 49.15 C
ATOM 16 N7 A B1351 48.464 181.394 81.100 1.00 48.52 N
ATOM 17 C5 A B1351 49.101 180.288 80.556 1.00 48.40 C
ATOM 18 C6 A B1351 49.812 180.097 79.357 1.00 47.83 C
ATOM 19 N6 A B1351 49.999 181.047 78.441 1.00 47.40 N
ATOM 20 N1 A B1351 50.333 178.875 79.126 1.00 47.53 N
ATOM 21 C2 A B1351 50.148 177.918 80.038 1.00 47.42 C
ATOM 22 N3 A B1351 49.498 177.971 81.196 1.00 48.13 N
ATOM 23 C4 A B1351 48.990 179.198 81.399 1.00 49.25 C
ATOM 24 P A B1352 47.404 177.065 87.793 1.00 54.38 P
ATOM 25 OP1 A B1352 46.831 175.712 87.580 1.00 53.81 O
ATOM 26 OP2 A B1352 46.639 178.081 88.568 1.00 52.28 O
ATOM 27 O5' A B1352 48.821 176.876 88.486 1.00 52.82 O
TER

Atoms:
OP1: (43.907,188.103,73.723)
OP2: (43.955,188.595,76.251)
C3': (42.759,183.661,75.730)
C1': (44.460,182.992,77.220)
C5': (44.296,185.233,74.447)
O6: (44.156,185.282,82.746)
O4': (45.058,183.735,76.170)
C8: (44.308,185.197,78.465)
C2: (44.553,182.004,81.435)
C6: (44.290,184.398,81.893)
C5: (44.326,184.528,80.483)
C4: (44.451,183.394,79.715)
P: (44.408,187.787,75.096)
C4': (44.112,183.881,75.079)
C2': (43.068,182.571,76.745)
O2': (43.160,181.300,76.141)
N1: (44.419,183.073,82.287)
N2: (44.680,180.796,82.011)
N3: (44.567,182.111,80.118)
N7: (44.246,185.658,79.683)
N9: (44.417,183.830,78.413)
O5': (44.075,186.265,75.424)
O3': (41.799,183.251,74.761)
OP1: (42.678,179.625,86.295)
OP2: (42.778,181.343,84.378)
C3': (46.803,178.522,85.708)
C1': (47.905,178.817,83.647)
C5': (44.601,177.967,84.487)
O4': (46.740,178.075,83.361)
C8: (47.982,180.955,82.236)
O2': (48.751,180.007,85.540)
C6: (49.812,180.097,79.357)
C5: (49.101,180.288,80.556)
C4: (48.990,179.198,81.399)
P: (42.882,179.929,84.850)
C4': (46.083,177.732,84.615)
C2': (47.558,179.587,84.915)
C2: (50.148,177.918,80.038)
N1: (50.333,178.875,79.126)
N3: (49.498,177.971,81.196)
N6: (49.999,181.047,78.441)
N7: (48.464,181.394,81.100)
N9: (48.265,179.633,82.484)
O5': (44.315,179.372,84.420)
O3': (47.749,177.683,86.352)
Image (generated by PyMOL):
PyMOL image
show in jmol