Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNI:A502:A505
Extra
PDB:
ATOM 1 O3' C A 501 29.349-103.972 -8.509 1.00 61.79 O
ATOM 2 P G A 502 28.153-102.899 -8.504 1.00 56.50 P
ATOM 3 OP1 G A 502 27.779-102.719 -7.069 1.00 51.43 O
ATOM 4 OP2 G A 502 27.124-103.312 -9.492 1.00 52.31 O
ATOM 5 O5' G A 502 28.855-101.590 -9.089 1.00 60.01 O
ATOM 6 C5' G A 502 30.048-101.053 -8.485 1.00 57.37 C
ATOM 7 C4' G A 502 30.677 -99.992 -9.373 1.00 54.76 C
ATOM 8 O4' G A 502 31.252-100.613 -10.553 1.00 58.01 O
ATOM 9 C3' G A 502 29.695 -98.971 -9.916 1.00 55.13 C
ATOM 10 O3' G A 502 29.446 -97.915 -9.000 1.00 56.07 O
ATOM 11 C2' G A 502 30.350 -98.514 -11.207 1.00 56.71 C
ATOM 12 O2' G A 502 31.330 -97.533 -10.977 1.00 68.98 O
ATOM 13 C1' G A 502 31.016 -99.799 -11.690 1.00 57.32 C
ATOM 14 N9 G A 502 30.157-100.529 -12.626 1.00 65.19 N
ATOM 15 C8 G A 502 29.332-101.597 -12.348 1.00 62.64 C
ATOM 16 N7 G A 502 28.664-102.010 -13.391 1.00 62.84 N
ATOM 17 C5 G A 502 29.071-101.170 -14.422 1.00 68.62 C
ATOM 18 C6 G A 502 28.672-101.121 -15.794 1.00 72.52 C
ATOM 19 O6 G A 502 27.841-101.824 -16.391 1.00 73.26 O
ATOM 20 N1 G A 502 29.339-100.115 -16.484 1.00 66.34 N
ATOM 21 C2 G A 502 30.253 -99.256 -15.935 1.00 68.42 C
ATOM 22 N2 G A 502 30.778 -98.347 -16.770 1.00 70.41 N
ATOM 23 N3 G A 502 30.625 -99.282 -14.664 1.00 65.41 N
ATOM 24 C4 G A 502 30.000-100.258 -13.970 1.00 65.38 C
ATOM 25 P G A 503 27.919 -97.459 -8.715 1.00 70.00 P
ATOM 26 OP1 G A 503 27.941 -96.451 -7.616 1.00 60.87 O
ATOM 27 OP2 G A 503 27.036 -98.654 -8.602 1.00 58.13 O
ATOM 28 O5' G A 503 27.469 -96.746 -10.064 1.00 55.40 O
TER
ATOM 1 O3' G B 504 29.672 -94.808 -18.609 1.00 56.83 O
ATOM 2 P A B 505 30.811 -95.426 -19.569 1.00 60.24 P
ATOM 3 OP1 A B 505 30.548 -94.876 -20.921 1.00 57.06 O
ATOM 4 OP2 A B 505 30.808 -96.898 -19.377 1.00 55.43 O
ATOM 5 O5' A B 505 32.198 -94.795 -19.060 1.00 57.84 O
ATOM 6 C5' A B 505 32.802 -93.662 -19.723 1.00 54.74 C
ATOM 7 C4' A B 505 34.265 -93.510 -19.333 1.00 54.75 C
ATOM 8 O4' A B 505 34.354 -93.297 -17.902 1.00 49.04 O
ATOM 9 C3' A B 505 35.166 -94.701 -19.639 1.00 50.49 C
ATOM 10 O3' A B 505 35.730 -94.558 -20.951 1.00 40.51 O
ATOM 11 C2' A B 505 36.224 -94.629 -18.539 1.00 50.68 C
ATOM 12 O2' A B 505 37.314 -93.800 -18.876 1.00 52.83 O
ATOM 13 C1' A B 505 35.446 -94.018 -17.370 1.00 48.42 C
ATOM 14 N9 A B 505 34.892 -95.002 -16.439 1.00 57.27 N
ATOM 15 C8 A B 505 33.581 -95.396 -16.374 1.00 62.32 C
ATOM 16 N7 A B 505 33.338 -96.287 -15.447 1.00 63.73 N
ATOM 17 C5 A B 505 34.575 -96.499 -14.860 1.00 56.64 C
ATOM 18 C6 A B 505 34.984 -97.320 -13.800 1.00 49.78 C
ATOM 19 N6 A B 505 34.161 -98.106 -13.106 1.00 55.12 N
ATOM 20 N1 A B 505 36.284 -97.300 -13.461 1.00 46.12 N
ATOM 21 C2 A B 505 37.108 -96.497 -14.137 1.00 56.28 C
ATOM 22 N3 A B 505 36.844 -95.668 -15.146 1.00 61.36 N
ATOM 23 C4 A B 505 35.543 -95.716 -15.462 1.00 58.32 C
ATOM 24 P G B 506 36.637 -95.733 -21.576 1.00 50.53 P
ATOM 25 OP1 G B 506 37.308 -95.312 -22.849 1.00 40.93 O
ATOM 26 OP2 G B 506 35.799 -96.961 -21.571 1.00 54.55 O
ATOM 27 O5' G B 506 37.769 -95.939 -20.480 1.00 52.08 O
TER
ATOM 2 P G A 502 28.153-102.899 -8.504 1.00 56.50 P
ATOM 3 OP1 G A 502 27.779-102.719 -7.069 1.00 51.43 O
ATOM 4 OP2 G A 502 27.124-103.312 -9.492 1.00 52.31 O
ATOM 5 O5' G A 502 28.855-101.590 -9.089 1.00 60.01 O
ATOM 6 C5' G A 502 30.048-101.053 -8.485 1.00 57.37 C
ATOM 7 C4' G A 502 30.677 -99.992 -9.373 1.00 54.76 C
ATOM 8 O4' G A 502 31.252-100.613 -10.553 1.00 58.01 O
ATOM 9 C3' G A 502 29.695 -98.971 -9.916 1.00 55.13 C
ATOM 10 O3' G A 502 29.446 -97.915 -9.000 1.00 56.07 O
ATOM 11 C2' G A 502 30.350 -98.514 -11.207 1.00 56.71 C
ATOM 12 O2' G A 502 31.330 -97.533 -10.977 1.00 68.98 O
ATOM 13 C1' G A 502 31.016 -99.799 -11.690 1.00 57.32 C
ATOM 14 N9 G A 502 30.157-100.529 -12.626 1.00 65.19 N
ATOM 15 C8 G A 502 29.332-101.597 -12.348 1.00 62.64 C
ATOM 16 N7 G A 502 28.664-102.010 -13.391 1.00 62.84 N
ATOM 17 C5 G A 502 29.071-101.170 -14.422 1.00 68.62 C
ATOM 18 C6 G A 502 28.672-101.121 -15.794 1.00 72.52 C
ATOM 19 O6 G A 502 27.841-101.824 -16.391 1.00 73.26 O
ATOM 20 N1 G A 502 29.339-100.115 -16.484 1.00 66.34 N
ATOM 21 C2 G A 502 30.253 -99.256 -15.935 1.00 68.42 C
ATOM 22 N2 G A 502 30.778 -98.347 -16.770 1.00 70.41 N
ATOM 23 N3 G A 502 30.625 -99.282 -14.664 1.00 65.41 N
ATOM 24 C4 G A 502 30.000-100.258 -13.970 1.00 65.38 C
ATOM 25 P G A 503 27.919 -97.459 -8.715 1.00 70.00 P
ATOM 26 OP1 G A 503 27.941 -96.451 -7.616 1.00 60.87 O
ATOM 27 OP2 G A 503 27.036 -98.654 -8.602 1.00 58.13 O
ATOM 28 O5' G A 503 27.469 -96.746 -10.064 1.00 55.40 O
TER
ATOM 1 O3' G B 504 29.672 -94.808 -18.609 1.00 56.83 O
ATOM 2 P A B 505 30.811 -95.426 -19.569 1.00 60.24 P
ATOM 3 OP1 A B 505 30.548 -94.876 -20.921 1.00 57.06 O
ATOM 4 OP2 A B 505 30.808 -96.898 -19.377 1.00 55.43 O
ATOM 5 O5' A B 505 32.198 -94.795 -19.060 1.00 57.84 O
ATOM 6 C5' A B 505 32.802 -93.662 -19.723 1.00 54.74 C
ATOM 7 C4' A B 505 34.265 -93.510 -19.333 1.00 54.75 C
ATOM 8 O4' A B 505 34.354 -93.297 -17.902 1.00 49.04 O
ATOM 9 C3' A B 505 35.166 -94.701 -19.639 1.00 50.49 C
ATOM 10 O3' A B 505 35.730 -94.558 -20.951 1.00 40.51 O
ATOM 11 C2' A B 505 36.224 -94.629 -18.539 1.00 50.68 C
ATOM 12 O2' A B 505 37.314 -93.800 -18.876 1.00 52.83 O
ATOM 13 C1' A B 505 35.446 -94.018 -17.370 1.00 48.42 C
ATOM 14 N9 A B 505 34.892 -95.002 -16.439 1.00 57.27 N
ATOM 15 C8 A B 505 33.581 -95.396 -16.374 1.00 62.32 C
ATOM 16 N7 A B 505 33.338 -96.287 -15.447 1.00 63.73 N
ATOM 17 C5 A B 505 34.575 -96.499 -14.860 1.00 56.64 C
ATOM 18 C6 A B 505 34.984 -97.320 -13.800 1.00 49.78 C
ATOM 19 N6 A B 505 34.161 -98.106 -13.106 1.00 55.12 N
ATOM 20 N1 A B 505 36.284 -97.300 -13.461 1.00 46.12 N
ATOM 21 C2 A B 505 37.108 -96.497 -14.137 1.00 56.28 C
ATOM 22 N3 A B 505 36.844 -95.668 -15.146 1.00 61.36 N
ATOM 23 C4 A B 505 35.543 -95.716 -15.462 1.00 58.32 C
ATOM 24 P G B 506 36.637 -95.733 -21.576 1.00 50.53 P
ATOM 25 OP1 G B 506 37.308 -95.312 -22.849 1.00 40.93 O
ATOM 26 OP2 G B 506 35.799 -96.961 -21.571 1.00 54.55 O
ATOM 27 O5' G B 506 37.769 -95.939 -20.480 1.00 52.08 O
TER
Atoms:
OP1: (27.779,-102.719,-7.069)
OP2: (27.124,-103.312,-9.492)
C3': (29.695,-98.971,-9.916)
C1': (31.016,-99.799,-11.690)
C5': (30.048,-101.053,-8.485)
O6: (27.841,-101.824,-16.391)
O4': (31.252,-100.613,-10.553)
C8: (29.332,-101.597,-12.348)
C2: (30.253,-99.256,-15.935)
C6: (28.672,-101.121,-15.794)
C5: (29.071,-101.170,-14.422)
C4: (30.000,-100.258,-13.970)
P: (28.153,-102.899,-8.504)
C4': (30.677,-99.992,-9.373)
C2': (30.350,-98.514,-11.207)
O2': (31.330,-97.533,-10.977)
N1: (29.339,-100.115,-16.484)
N2: (30.778,-98.347,-16.770)
N3: (30.625,-99.282,-14.664)
N7: (28.664,-102.010,-13.391)
N9: (30.157,-100.529,-12.626)
O5': (28.855,-101.590,-9.089)
O3': (29.446,-97.915,-9.000)
OP2: (27.124,-103.312,-9.492)
C3': (29.695,-98.971,-9.916)
C1': (31.016,-99.799,-11.690)
C5': (30.048,-101.053,-8.485)
O6: (27.841,-101.824,-16.391)
O4': (31.252,-100.613,-10.553)
C8: (29.332,-101.597,-12.348)
C2: (30.253,-99.256,-15.935)
C6: (28.672,-101.121,-15.794)
C5: (29.071,-101.170,-14.422)
C4: (30.000,-100.258,-13.970)
P: (28.153,-102.899,-8.504)
C4': (30.677,-99.992,-9.373)
C2': (30.350,-98.514,-11.207)
O2': (31.330,-97.533,-10.977)
N1: (29.339,-100.115,-16.484)
N2: (30.778,-98.347,-16.770)
N3: (30.625,-99.282,-14.664)
N7: (28.664,-102.010,-13.391)
N9: (30.157,-100.529,-12.626)
O5': (28.855,-101.590,-9.089)
O3': (29.446,-97.915,-9.000)
OP1: (30.548,-94.876,-20.921)
OP2: (30.808,-96.898,-19.377)
C3': (35.166,-94.701,-19.639)
C1': (35.446,-94.018,-17.370)
C5': (32.802,-93.662,-19.723)
O4': (34.354,-93.297,-17.902)
C8: (33.581,-95.396,-16.374)
O2': (37.314,-93.800,-18.876)
C6: (34.984,-97.320,-13.800)
C5: (34.575,-96.499,-14.860)
C4: (35.543,-95.716,-15.462)
P: (30.811,-95.426,-19.569)
C4': (34.265,-93.510,-19.333)
C2': (36.224,-94.629,-18.539)
C2: (37.108,-96.497,-14.137)
N1: (36.284,-97.300,-13.461)
N3: (36.844,-95.668,-15.146)
N6: (34.161,-98.106,-13.106)
N7: (33.338,-96.287,-15.447)
N9: (34.892,-95.002,-16.439)
O5': (32.198,-94.795,-19.060)
O3': (35.730,-94.558,-20.951)
OP2: (30.808,-96.898,-19.377)
C3': (35.166,-94.701,-19.639)
C1': (35.446,-94.018,-17.370)
C5': (32.802,-93.662,-19.723)
O4': (34.354,-93.297,-17.902)
C8: (33.581,-95.396,-16.374)
O2': (37.314,-93.800,-18.876)
C6: (34.984,-97.320,-13.800)
C5: (34.575,-96.499,-14.860)
C4: (35.543,-95.716,-15.462)
P: (30.811,-95.426,-19.569)
C4': (34.265,-93.510,-19.333)
C2': (36.224,-94.629,-18.539)
C2: (37.108,-96.497,-14.137)
N1: (36.284,-97.300,-13.461)
N3: (36.844,-95.668,-15.146)
N6: (34.161,-98.106,-13.106)
N7: (33.338,-96.287,-15.447)
N9: (34.892,-95.002,-16.439)
O5': (32.198,-94.795,-19.060)
O3': (35.730,-94.558,-20.951)
Image (generated by PyMOL):