Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11538:11539
Extra
PDB:
ATOM 1 O3' A A1537 23.693 31.078 141.098 1.00 65.39 O
ATOM 2 P A A1538 23.668 31.980 139.787 1.00 66.58 P
ATOM 3 OP1 A A1538 22.269 32.441 139.615 1.00 66.71 O
ATOM 4 OP2 A A1538 24.313 31.204 138.705 1.00 65.83 O
ATOM 5 O5' A A1538 24.605 33.191 140.198 1.00 67.09 O
ATOM 6 C5' A A1538 24.452 33.820 141.459 1.00 67.88 C
ATOM 7 C4' A A1538 25.744 34.402 141.957 1.00 68.25 C
ATOM 8 O4' A A1538 26.640 33.345 142.351 1.00 68.10 O
ATOM 9 C3' A A1538 26.533 35.223 140.959 1.00 67.99 C
ATOM 10 O3' A A1538 26.062 36.545 140.894 1.00 68.39 O
ATOM 11 C2' A A1538 27.965 35.122 141.483 1.00 68.17 C
ATOM 12 O2' A A1538 28.186 36.068 142.513 1.00 68.96 O
ATOM 13 C1' A A1538 27.981 33.734 142.115 1.00 68.06 C
ATOM 14 N9 A A1538 28.617 32.720 141.254 1.00 67.33 N
ATOM 15 C8 A A1538 28.082 32.136 140.154 1.00 66.64 C
ATOM 16 N7 A A1538 28.879 31.239 139.651 1.00 66.13 N
ATOM 17 C5 A A1538 29.994 31.231 140.463 1.00 66.49 C
ATOM 18 C6 A A1538 31.183 30.499 140.433 1.00 66.26 C
ATOM 19 N6 A A1538 31.465 29.596 139.514 1.00 65.57 N
ATOM 20 N1 A A1538 32.097 30.726 141.375 1.00 66.77 N
ATOM 21 C2 A A1538 31.807 31.634 142.301 1.00 67.48 C
ATOM 22 N3 A A1538 30.720 32.381 142.442 1.00 67.77 N
ATOM 23 C4 A A1538 29.842 32.136 141.464 1.00 67.24 C
ATOM 24 P U A1539 25.781 37.220 139.488 1.00 60.92 P
ATOM 25 OP1 U A1539 25.374 38.638 139.749 1.00 61.52 O
ATOM 26 OP2 U A1539 24.860 36.344 138.769 1.00 60.34 O
ATOM 27 O5' U A1539 27.207 37.182 138.808 1.00 60.53 O
TER
ATOM 1 O3' A B1538 26.062 36.545 140.894 1.00 68.39 O
ATOM 2 P U B1539 25.781 37.220 139.488 1.00 60.92 P
ATOM 3 OP1 U B1539 25.374 38.638 139.749 1.00 61.52 O
ATOM 4 OP2 U B1539 24.860 36.344 138.769 1.00 60.34 O
ATOM 5 O5' U B1539 27.207 37.182 138.808 1.00 60.53 O
ATOM 6 C5' U B1539 28.287 37.938 139.341 1.00 61.00 C
ATOM 7 C4' U B1539 28.322 39.331 138.772 1.00 61.18 C
ATOM 8 O4' U B1539 29.285 40.119 139.513 1.00 61.77 O
ATOM 9 C3' U B1539 28.757 39.428 137.313 1.00 60.52 C
ATOM 10 O3' U B1539 28.200 40.605 136.742 1.00 60.67 O
ATOM 11 C2' U B1539 30.240 39.624 137.460 1.00 60.62 C
ATOM 12 O2' U B1539 30.872 40.138 136.320 1.00 60.26 O
ATOM 13 C1' U B1539 30.247 40.612 138.610 1.00 61.49 C
ATOM 14 N1 U B1539 31.531 40.738 139.305 1.00 61.84 N
ATOM 15 C2 U B1539 31.624 41.896 139.999 1.00 62.57 C
ATOM 16 O2 U B1539 30.704 42.700 140.046 1.00 62.89 O
ATOM 17 N3 U B1539 32.815 42.052 140.633 1.00 62.92 N
ATOM 18 C4 U B1539 33.893 41.196 140.643 1.00 62.62 C
ATOM 19 O4 U B1539 34.899 41.520 141.286 1.00 63.05 O
ATOM 20 C5 U B1539 33.710 40.001 139.891 1.00 61.85 C
ATOM 21 C6 U B1539 32.556 39.822 139.247 1.00 61.49 C
ATOM 22 P C B1540 27.222 40.504 135.489 1.00 59.80 P
ATOM 23 OP1 C B1540 25.966 39.918 135.953 1.00 59.86 O
ATOM 24 OP2 C B1540 27.953 39.832 134.419 1.00 59.07 O
ATOM 25 O5' C B1540 27.001 42.012 135.118 1.00 60.16 O
TER
ATOM 2 P A A1538 23.668 31.980 139.787 1.00 66.58 P
ATOM 3 OP1 A A1538 22.269 32.441 139.615 1.00 66.71 O
ATOM 4 OP2 A A1538 24.313 31.204 138.705 1.00 65.83 O
ATOM 5 O5' A A1538 24.605 33.191 140.198 1.00 67.09 O
ATOM 6 C5' A A1538 24.452 33.820 141.459 1.00 67.88 C
ATOM 7 C4' A A1538 25.744 34.402 141.957 1.00 68.25 C
ATOM 8 O4' A A1538 26.640 33.345 142.351 1.00 68.10 O
ATOM 9 C3' A A1538 26.533 35.223 140.959 1.00 67.99 C
ATOM 10 O3' A A1538 26.062 36.545 140.894 1.00 68.39 O
ATOM 11 C2' A A1538 27.965 35.122 141.483 1.00 68.17 C
ATOM 12 O2' A A1538 28.186 36.068 142.513 1.00 68.96 O
ATOM 13 C1' A A1538 27.981 33.734 142.115 1.00 68.06 C
ATOM 14 N9 A A1538 28.617 32.720 141.254 1.00 67.33 N
ATOM 15 C8 A A1538 28.082 32.136 140.154 1.00 66.64 C
ATOM 16 N7 A A1538 28.879 31.239 139.651 1.00 66.13 N
ATOM 17 C5 A A1538 29.994 31.231 140.463 1.00 66.49 C
ATOM 18 C6 A A1538 31.183 30.499 140.433 1.00 66.26 C
ATOM 19 N6 A A1538 31.465 29.596 139.514 1.00 65.57 N
ATOM 20 N1 A A1538 32.097 30.726 141.375 1.00 66.77 N
ATOM 21 C2 A A1538 31.807 31.634 142.301 1.00 67.48 C
ATOM 22 N3 A A1538 30.720 32.381 142.442 1.00 67.77 N
ATOM 23 C4 A A1538 29.842 32.136 141.464 1.00 67.24 C
ATOM 24 P U A1539 25.781 37.220 139.488 1.00 60.92 P
ATOM 25 OP1 U A1539 25.374 38.638 139.749 1.00 61.52 O
ATOM 26 OP2 U A1539 24.860 36.344 138.769 1.00 60.34 O
ATOM 27 O5' U A1539 27.207 37.182 138.808 1.00 60.53 O
TER
ATOM 1 O3' A B1538 26.062 36.545 140.894 1.00 68.39 O
ATOM 2 P U B1539 25.781 37.220 139.488 1.00 60.92 P
ATOM 3 OP1 U B1539 25.374 38.638 139.749 1.00 61.52 O
ATOM 4 OP2 U B1539 24.860 36.344 138.769 1.00 60.34 O
ATOM 5 O5' U B1539 27.207 37.182 138.808 1.00 60.53 O
ATOM 6 C5' U B1539 28.287 37.938 139.341 1.00 61.00 C
ATOM 7 C4' U B1539 28.322 39.331 138.772 1.00 61.18 C
ATOM 8 O4' U B1539 29.285 40.119 139.513 1.00 61.77 O
ATOM 9 C3' U B1539 28.757 39.428 137.313 1.00 60.52 C
ATOM 10 O3' U B1539 28.200 40.605 136.742 1.00 60.67 O
ATOM 11 C2' U B1539 30.240 39.624 137.460 1.00 60.62 C
ATOM 12 O2' U B1539 30.872 40.138 136.320 1.00 60.26 O
ATOM 13 C1' U B1539 30.247 40.612 138.610 1.00 61.49 C
ATOM 14 N1 U B1539 31.531 40.738 139.305 1.00 61.84 N
ATOM 15 C2 U B1539 31.624 41.896 139.999 1.00 62.57 C
ATOM 16 O2 U B1539 30.704 42.700 140.046 1.00 62.89 O
ATOM 17 N3 U B1539 32.815 42.052 140.633 1.00 62.92 N
ATOM 18 C4 U B1539 33.893 41.196 140.643 1.00 62.62 C
ATOM 19 O4 U B1539 34.899 41.520 141.286 1.00 63.05 O
ATOM 20 C5 U B1539 33.710 40.001 139.891 1.00 61.85 C
ATOM 21 C6 U B1539 32.556 39.822 139.247 1.00 61.49 C
ATOM 22 P C B1540 27.222 40.504 135.489 1.00 59.80 P
ATOM 23 OP1 C B1540 25.966 39.918 135.953 1.00 59.86 O
ATOM 24 OP2 C B1540 27.953 39.832 134.419 1.00 59.07 O
ATOM 25 O5' C B1540 27.001 42.012 135.118 1.00 60.16 O
TER
Atoms:
OP1: (22.269,32.441,139.615)
OP2: (24.313,31.204,138.705)
C3': (26.533,35.223,140.959)
C1': (27.981,33.734,142.115)
C5': (24.452,33.820,141.459)
O4': (26.640,33.345,142.351)
C8: (28.082,32.136,140.154)
O2': (28.186,36.068,142.513)
C6: (31.183,30.499,140.433)
C5: (29.994,31.231,140.463)
C4: (29.842,32.136,141.464)
P: (23.668,31.980,139.787)
C4': (25.744,34.402,141.957)
C2': (27.965,35.122,141.483)
C2: (31.807,31.634,142.301)
N1: (32.097,30.726,141.375)
N3: (30.720,32.381,142.442)
N6: (31.465,29.596,139.514)
N7: (28.879,31.239,139.651)
N9: (28.617,32.720,141.254)
O5': (24.605,33.191,140.198)
O3': (26.062,36.545,140.894)
OP2: (24.313,31.204,138.705)
C3': (26.533,35.223,140.959)
C1': (27.981,33.734,142.115)
C5': (24.452,33.820,141.459)
O4': (26.640,33.345,142.351)
C8: (28.082,32.136,140.154)
O2': (28.186,36.068,142.513)
C6: (31.183,30.499,140.433)
C5: (29.994,31.231,140.463)
C4: (29.842,32.136,141.464)
P: (23.668,31.980,139.787)
C4': (25.744,34.402,141.957)
C2': (27.965,35.122,141.483)
C2: (31.807,31.634,142.301)
N1: (32.097,30.726,141.375)
N3: (30.720,32.381,142.442)
N6: (31.465,29.596,139.514)
N7: (28.879,31.239,139.651)
N9: (28.617,32.720,141.254)
O5': (24.605,33.191,140.198)
O3': (26.062,36.545,140.894)
C4: (33.893,41.196,140.643)
N3: (32.815,42.052,140.633)
OP1: (25.374,38.638,139.749)
OP2: (24.860,36.344,138.769)
C2: (31.624,41.896,139.999)
C1': (30.247,40.612,138.610)
C3': (28.757,39.428,137.313)
O5': (27.207,37.182,138.808)
O4': (29.285,40.119,139.513)
C5': (28.287,37.938,139.341)
P: (25.781,37.220,139.488)
C4': (28.322,39.331,138.772)
C2': (30.240,39.624,137.460)
O2': (30.872,40.138,136.320)
N1: (31.531,40.738,139.305)
O4: (34.899,41.520,141.286)
O2: (30.704,42.700,140.046)
C6: (32.556,39.822,139.247)
C5: (33.710,40.001,139.891)
O3': (28.200,40.605,136.742)
N3: (32.815,42.052,140.633)
OP1: (25.374,38.638,139.749)
OP2: (24.860,36.344,138.769)
C2: (31.624,41.896,139.999)
C1': (30.247,40.612,138.610)
C3': (28.757,39.428,137.313)
O5': (27.207,37.182,138.808)
O4': (29.285,40.119,139.513)
C5': (28.287,37.938,139.341)
P: (25.781,37.220,139.488)
C4': (28.322,39.331,138.772)
C2': (30.240,39.624,137.460)
O2': (30.872,40.138,136.320)
N1: (31.531,40.738,139.305)
O4: (34.899,41.520,141.286)
O2: (30.704,42.700,140.046)
C6: (32.556,39.822,139.247)
C5: (33.710,40.001,139.891)
O3': (28.200,40.605,136.742)
Image (generated by PyMOL):