Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1MZP:B25:B28
Extra
PDB:
ATOM 1 O3' C A 24 0.037 40.990 10.641 1.00 50.63 O
ATOM 2 P G A 25 -0.766 39.898 9.782 1.00 53.25 P
ATOM 3 OP1 G A 25 -0.727 38.635 10.562 1.00 53.44 O
ATOM 4 OP2 G A 25 -0.263 39.917 8.382 1.00 52.55 O
ATOM 5 O5' G A 25 -2.260 40.450 9.752 1.00 54.35 O
ATOM 6 C5' G A 25 -3.056 40.471 10.935 1.00 55.45 C
ATOM 7 C4' G A 25 -4.431 41.025 10.635 1.00 55.99 C
ATOM 8 O4' G A 25 -4.341 42.448 10.341 1.00 55.27 O
ATOM 9 C3' G A 25 -5.121 40.463 9.405 1.00 56.98 C
ATOM 10 O3' G A 25 -5.699 39.186 9.640 1.00 60.13 O
ATOM 11 C2' G A 25 -6.169 41.532 9.135 1.00 55.95 C
ATOM 12 O2' G A 25 -7.292 41.427 9.995 1.00 55.98 O
ATOM 13 C1' G A 25 -5.364 42.806 9.421 1.00 54.61 C
ATOM 14 N9 G A 25 -4.740 43.277 8.192 1.00 51.48 N
ATOM 15 C8 G A 25 -3.502 42.930 7.703 1.00 50.59 C
ATOM 16 N7 G A 25 -3.269 43.411 6.512 1.00 48.19 N
ATOM 17 C5 G A 25 -4.412 44.141 6.208 1.00 47.16 C
ATOM 18 C6 G A 25 -4.752 44.859 5.039 1.00 46.15 C
ATOM 19 O6 G A 25 -4.102 44.983 4.000 1.00 49.50 O
ATOM 20 N1 G A 25 -5.997 45.465 5.150 1.00 45.28 N
ATOM 21 C2 G A 25 -6.818 45.384 6.245 1.00 47.60 C
ATOM 22 N2 G A 25 -7.980 46.056 6.157 1.00 45.61 N
ATOM 23 N3 G A 25 -6.520 44.698 7.346 1.00 48.05 N
ATOM 24 C4 G A 25 -5.310 44.103 7.252 1.00 48.78 C
ATOM 25 P C A 26 -5.671 38.074 8.474 1.00 61.57 P
ATOM 26 OP1 C A 26 -6.033 36.777 9.099 1.00 63.03 O
ATOM 27 OP2 C A 26 -4.396 38.197 7.720 1.00 62.42 O
ATOM 28 O5' C A 26 -6.824 38.513 7.472 1.00 60.95 O
TER
ATOM 1 O3' A B 27 -11.638 45.498 4.001 1.00 48.78 O
ATOM 2 P A B 28 -11.174 47.032 4.089 1.00 48.60 P
ATOM 3 OP1 A B 28 -11.754 47.737 2.915 1.00 45.98 O
ATOM 4 OP2 A B 28 -9.699 47.043 4.305 1.00 49.87 O
ATOM 5 O5' A B 28 -11.862 47.578 5.419 1.00 45.62 O
ATOM 6 C5' A B 28 -13.248 47.878 5.448 1.00 44.56 C
ATOM 7 C4' A B 28 -13.690 48.161 6.861 1.00 45.06 C
ATOM 8 O4' A B 28 -13.464 46.987 7.688 1.00 44.50 O
ATOM 9 C3' A B 28 -12.929 49.266 7.566 1.00 44.83 C
ATOM 10 O3' A B 28 -13.476 50.536 7.240 1.00 46.00 O
ATOM 11 C2' A B 28 -13.149 48.910 9.028 1.00 44.16 C
ATOM 12 O2' A B 28 -14.422 49.295 9.497 1.00 43.31 O
ATOM 13 C1' A B 28 -13.049 47.386 8.982 1.00 43.30 C
ATOM 14 N9 A B 28 -11.676 46.923 9.170 1.00 42.79 N
ATOM 15 C8 A B 28 -10.697 46.828 8.214 1.00 41.35 C
ATOM 16 N7 A B 28 -9.550 46.395 8.673 1.00 42.02 N
ATOM 17 C5 A B 28 -9.789 46.187 10.024 1.00 42.24 C
ATOM 18 C6 A B 28 -8.973 45.723 11.061 1.00 42.85 C
ATOM 19 N6 A B 28 -7.697 45.377 10.891 1.00 46.60 N
ATOM 20 N1 A B 28 -9.517 45.619 12.294 1.00 42.15 N
ATOM 21 C2 A B 28 -10.800 45.962 12.455 1.00 42.39 C
ATOM 22 N3 A B 28 -11.671 46.411 11.555 1.00 41.71 N
ATOM 23 C4 A B 28 -11.096 46.503 10.344 1.00 41.93 C
ATOM 24 P G B 29 -12.492 51.757 6.878 1.00 45.75 P
ATOM 25 OP1 G B 29 -13.324 52.989 6.828 1.00 44.71 O
ATOM 26 OP2 G B 29 -11.673 51.365 5.699 1.00 44.93 O
ATOM 27 O5' G B 29 -11.516 51.856 8.129 1.00 45.17 O
TER
ATOM 2 P G A 25 -0.766 39.898 9.782 1.00 53.25 P
ATOM 3 OP1 G A 25 -0.727 38.635 10.562 1.00 53.44 O
ATOM 4 OP2 G A 25 -0.263 39.917 8.382 1.00 52.55 O
ATOM 5 O5' G A 25 -2.260 40.450 9.752 1.00 54.35 O
ATOM 6 C5' G A 25 -3.056 40.471 10.935 1.00 55.45 C
ATOM 7 C4' G A 25 -4.431 41.025 10.635 1.00 55.99 C
ATOM 8 O4' G A 25 -4.341 42.448 10.341 1.00 55.27 O
ATOM 9 C3' G A 25 -5.121 40.463 9.405 1.00 56.98 C
ATOM 10 O3' G A 25 -5.699 39.186 9.640 1.00 60.13 O
ATOM 11 C2' G A 25 -6.169 41.532 9.135 1.00 55.95 C
ATOM 12 O2' G A 25 -7.292 41.427 9.995 1.00 55.98 O
ATOM 13 C1' G A 25 -5.364 42.806 9.421 1.00 54.61 C
ATOM 14 N9 G A 25 -4.740 43.277 8.192 1.00 51.48 N
ATOM 15 C8 G A 25 -3.502 42.930 7.703 1.00 50.59 C
ATOM 16 N7 G A 25 -3.269 43.411 6.512 1.00 48.19 N
ATOM 17 C5 G A 25 -4.412 44.141 6.208 1.00 47.16 C
ATOM 18 C6 G A 25 -4.752 44.859 5.039 1.00 46.15 C
ATOM 19 O6 G A 25 -4.102 44.983 4.000 1.00 49.50 O
ATOM 20 N1 G A 25 -5.997 45.465 5.150 1.00 45.28 N
ATOM 21 C2 G A 25 -6.818 45.384 6.245 1.00 47.60 C
ATOM 22 N2 G A 25 -7.980 46.056 6.157 1.00 45.61 N
ATOM 23 N3 G A 25 -6.520 44.698 7.346 1.00 48.05 N
ATOM 24 C4 G A 25 -5.310 44.103 7.252 1.00 48.78 C
ATOM 25 P C A 26 -5.671 38.074 8.474 1.00 61.57 P
ATOM 26 OP1 C A 26 -6.033 36.777 9.099 1.00 63.03 O
ATOM 27 OP2 C A 26 -4.396 38.197 7.720 1.00 62.42 O
ATOM 28 O5' C A 26 -6.824 38.513 7.472 1.00 60.95 O
TER
ATOM 1 O3' A B 27 -11.638 45.498 4.001 1.00 48.78 O
ATOM 2 P A B 28 -11.174 47.032 4.089 1.00 48.60 P
ATOM 3 OP1 A B 28 -11.754 47.737 2.915 1.00 45.98 O
ATOM 4 OP2 A B 28 -9.699 47.043 4.305 1.00 49.87 O
ATOM 5 O5' A B 28 -11.862 47.578 5.419 1.00 45.62 O
ATOM 6 C5' A B 28 -13.248 47.878 5.448 1.00 44.56 C
ATOM 7 C4' A B 28 -13.690 48.161 6.861 1.00 45.06 C
ATOM 8 O4' A B 28 -13.464 46.987 7.688 1.00 44.50 O
ATOM 9 C3' A B 28 -12.929 49.266 7.566 1.00 44.83 C
ATOM 10 O3' A B 28 -13.476 50.536 7.240 1.00 46.00 O
ATOM 11 C2' A B 28 -13.149 48.910 9.028 1.00 44.16 C
ATOM 12 O2' A B 28 -14.422 49.295 9.497 1.00 43.31 O
ATOM 13 C1' A B 28 -13.049 47.386 8.982 1.00 43.30 C
ATOM 14 N9 A B 28 -11.676 46.923 9.170 1.00 42.79 N
ATOM 15 C8 A B 28 -10.697 46.828 8.214 1.00 41.35 C
ATOM 16 N7 A B 28 -9.550 46.395 8.673 1.00 42.02 N
ATOM 17 C5 A B 28 -9.789 46.187 10.024 1.00 42.24 C
ATOM 18 C6 A B 28 -8.973 45.723 11.061 1.00 42.85 C
ATOM 19 N6 A B 28 -7.697 45.377 10.891 1.00 46.60 N
ATOM 20 N1 A B 28 -9.517 45.619 12.294 1.00 42.15 N
ATOM 21 C2 A B 28 -10.800 45.962 12.455 1.00 42.39 C
ATOM 22 N3 A B 28 -11.671 46.411 11.555 1.00 41.71 N
ATOM 23 C4 A B 28 -11.096 46.503 10.344 1.00 41.93 C
ATOM 24 P G B 29 -12.492 51.757 6.878 1.00 45.75 P
ATOM 25 OP1 G B 29 -13.324 52.989 6.828 1.00 44.71 O
ATOM 26 OP2 G B 29 -11.673 51.365 5.699 1.00 44.93 O
ATOM 27 O5' G B 29 -11.516 51.856 8.129 1.00 45.17 O
TER
Atoms:
OP1: (-0.727,38.635,10.562)
OP2: (-0.263,39.917,8.382)
C3': (-5.121,40.463,9.405)
C1': (-5.364,42.806,9.421)
C5': (-3.056,40.471,10.935)
O6: (-4.102,44.983,4.000)
O4': (-4.341,42.448,10.341)
C8: (-3.502,42.930,7.703)
C2: (-6.818,45.384,6.245)
C6: (-4.752,44.859,5.039)
C5: (-4.412,44.141,6.208)
C4: (-5.310,44.103,7.252)
P: (-0.766,39.898,9.782)
C4': (-4.431,41.025,10.635)
C2': (-6.169,41.532,9.135)
O2': (-7.292,41.427,9.995)
N1: (-5.997,45.465,5.150)
N2: (-7.980,46.056,6.157)
N3: (-6.520,44.698,7.346)
N7: (-3.269,43.411,6.512)
N9: (-4.740,43.277,8.192)
O5': (-2.260,40.450,9.752)
O3': (-5.699,39.186,9.640)
OP2: (-0.263,39.917,8.382)
C3': (-5.121,40.463,9.405)
C1': (-5.364,42.806,9.421)
C5': (-3.056,40.471,10.935)
O6: (-4.102,44.983,4.000)
O4': (-4.341,42.448,10.341)
C8: (-3.502,42.930,7.703)
C2: (-6.818,45.384,6.245)
C6: (-4.752,44.859,5.039)
C5: (-4.412,44.141,6.208)
C4: (-5.310,44.103,7.252)
P: (-0.766,39.898,9.782)
C4': (-4.431,41.025,10.635)
C2': (-6.169,41.532,9.135)
O2': (-7.292,41.427,9.995)
N1: (-5.997,45.465,5.150)
N2: (-7.980,46.056,6.157)
N3: (-6.520,44.698,7.346)
N7: (-3.269,43.411,6.512)
N9: (-4.740,43.277,8.192)
O5': (-2.260,40.450,9.752)
O3': (-5.699,39.186,9.640)
OP1: (-11.754,47.737,2.915)
OP2: (-9.699,47.043,4.305)
C3': (-12.929,49.266,7.566)
C1': (-13.049,47.386,8.982)
C5': (-13.248,47.878,5.448)
O4': (-13.464,46.987,7.688)
C8: (-10.697,46.828,8.214)
O2': (-14.422,49.295,9.497)
C6: (-8.973,45.723,11.061)
C5: (-9.789,46.187,10.024)
C4: (-11.096,46.503,10.344)
P: (-11.174,47.032,4.089)
C4': (-13.690,48.161,6.861)
C2': (-13.149,48.910,9.028)
C2: (-10.800,45.962,12.455)
N1: (-9.517,45.619,12.294)
N3: (-11.671,46.411,11.555)
N6: (-7.697,45.377,10.891)
N7: (-9.550,46.395,8.673)
N9: (-11.676,46.923,9.170)
O5': (-11.862,47.578,5.419)
O3': (-13.476,50.536,7.240)
OP2: (-9.699,47.043,4.305)
C3': (-12.929,49.266,7.566)
C1': (-13.049,47.386,8.982)
C5': (-13.248,47.878,5.448)
O4': (-13.464,46.987,7.688)
C8: (-10.697,46.828,8.214)
O2': (-14.422,49.295,9.497)
C6: (-8.973,45.723,11.061)
C5: (-9.789,46.187,10.024)
C4: (-11.096,46.503,10.344)
P: (-11.174,47.032,4.089)
C4': (-13.690,48.161,6.861)
C2': (-13.149,48.910,9.028)
C2: (-10.800,45.962,12.455)
N1: (-9.517,45.619,12.294)
N3: (-11.671,46.411,11.555)
N6: (-7.697,45.377,10.891)
N7: (-9.550,46.395,8.673)
N9: (-11.676,46.923,9.170)
O5': (-11.862,47.578,5.419)
O3': (-13.476,50.536,7.240)
Image (generated by PyMOL):