Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A508:A509
Extra
PDB:
ATOM 1 O3' A A 507 -100.902 36.215 -56.314 1.00 23.12 O
ATOM 2 P A A 508 -101.799 36.682 -55.073 1.00 27.69 P
ATOM 3 OP1 A A 508 -102.325 38.024 -55.399 1.00 27.69 O
ATOM 4 OP2 A A 508 -100.976 36.527 -53.863 1.00 27.69 O
ATOM 5 O5' A A 508 -102.992 35.615 -55.088 1.00 27.69 O
ATOM 6 C5' A A 508 -104.011 35.678 -56.091 1.00 27.69 C
ATOM 7 C4' A A 508 -104.266 34.332 -56.764 1.00 27.69 C
ATOM 8 O4' A A 508 -103.009 33.746 -57.198 1.00 27.69 O
ATOM 9 C3' A A 508 -104.910 33.243 -55.909 1.00 27.69 C
ATOM 10 O3' A A 508 -106.320 33.356 -55.832 1.00 27.69 O
ATOM 11 C2' A A 508 -104.444 31.962 -56.585 1.00 27.69 C
ATOM 12 O2' A A 508 -105.222 31.689 -57.738 1.00 27.69 O
ATOM 13 C1' A A 508 -103.038 32.344 -57.027 1.00 27.69 C
ATOM 14 N9 A A 508 -102.031 31.979 -56.019 1.00 27.51 N
ATOM 15 C8 A A 508 -101.643 32.733 -54.947 1.00 27.51 C
ATOM 16 N7 A A 508 -100.722 32.164 -54.214 1.00 27.51 N
ATOM 17 C5 A A 508 -100.484 30.960 -54.845 1.00 27.51 C
ATOM 18 C6 A A 508 -99.619 29.907 -54.547 1.00 27.51 C
ATOM 19 N6 A A 508 -98.800 29.909 -53.498 1.00 27.51 N
ATOM 20 N1 A A 508 -99.619 28.842 -55.365 1.00 27.51 N
ATOM 21 C2 A A 508 -100.433 28.854 -56.415 1.00 27.51 C
ATOM 22 N3 A A 508 -101.297 29.783 -56.795 1.00 27.51 N
ATOM 23 C4 A A 508 -101.278 30.830 -55.960 1.00 27.51 C
ATOM 24 P C A 509 -106.999 34.784 -55.573 1.00 27.67 P
ATOM 25 OP1 C A 509 -107.065 35.460 -56.885 1.00 27.67 O
ATOM 26 OP2 C A 509 -106.253 35.438 -54.469 1.00 27.67 O
ATOM 27 O5' C A 509 -108.467 34.400 -55.084 1.00 27.67 O
TER
ATOM 1 O3' A B 508 -106.320 33.356 -55.832 1.00 27.69 O
ATOM 2 P C B 509 -106.999 34.784 -55.573 1.00 27.67 P
ATOM 3 OP1 C B 509 -107.065 35.460 -56.885 1.00 27.67 O
ATOM 4 OP2 C B 509 -106.253 35.438 -54.469 1.00 27.67 O
ATOM 5 O5' C B 509 -108.467 34.400 -55.084 1.00 27.67 O
ATOM 6 C5' C B 509 -108.714 33.962 -53.752 1.00 27.67 C
ATOM 7 C4' C B 509 -110.001 33.188 -53.667 1.00 27.67 C
ATOM 8 O4' C B 509 -109.865 31.944 -54.404 1.00 27.67 O
ATOM 9 C3' C B 509 -110.445 32.792 -52.263 1.00 27.67 C
ATOM 10 O3' C B 509 -111.858 32.831 -52.193 1.00 27.67 O
ATOM 11 C2' C B 509 -110.010 31.348 -52.163 1.00 27.67 C
ATOM 12 O2' C B 509 -110.731 30.599 -51.209 1.00 27.67 O
ATOM 13 C1' C B 509 -110.285 30.877 -53.579 1.00 27.67 C
ATOM 14 N1 C B 509 -109.556 29.659 -53.976 1.00 27.71 N
ATOM 15 C2 C B 509 -110.068 28.958 -55.069 1.00 27.71 C
ATOM 16 O2 C B 509 -111.087 29.401 -55.610 1.00 27.71 O
ATOM 17 N3 C B 509 -109.460 27.835 -55.509 1.00 27.71 N
ATOM 18 C4 C B 509 -108.369 27.422 -54.873 1.00 27.71 C
ATOM 19 N4 C B 509 -107.785 26.321 -55.329 1.00 27.71 N
ATOM 20 C5 C B 509 -107.812 28.106 -53.744 1.00 27.71 C
ATOM 21 C6 C B 509 -108.432 29.217 -53.330 1.00 27.71 C
ATOM 22 P U B 510 -112.580 33.821 -51.179 1.00 38.09 P
ATOM 23 OP1 U B 510 -112.675 35.145 -51.868 1.00 38.09 O
ATOM 24 OP2 U B 510 -111.851 33.737 -49.882 1.00 38.09 O
ATOM 25 O5' U B 510 -114.024 33.170 -51.036 1.00 38.09 O
TER
ATOM 2 P A A 508 -101.799 36.682 -55.073 1.00 27.69 P
ATOM 3 OP1 A A 508 -102.325 38.024 -55.399 1.00 27.69 O
ATOM 4 OP2 A A 508 -100.976 36.527 -53.863 1.00 27.69 O
ATOM 5 O5' A A 508 -102.992 35.615 -55.088 1.00 27.69 O
ATOM 6 C5' A A 508 -104.011 35.678 -56.091 1.00 27.69 C
ATOM 7 C4' A A 508 -104.266 34.332 -56.764 1.00 27.69 C
ATOM 8 O4' A A 508 -103.009 33.746 -57.198 1.00 27.69 O
ATOM 9 C3' A A 508 -104.910 33.243 -55.909 1.00 27.69 C
ATOM 10 O3' A A 508 -106.320 33.356 -55.832 1.00 27.69 O
ATOM 11 C2' A A 508 -104.444 31.962 -56.585 1.00 27.69 C
ATOM 12 O2' A A 508 -105.222 31.689 -57.738 1.00 27.69 O
ATOM 13 C1' A A 508 -103.038 32.344 -57.027 1.00 27.69 C
ATOM 14 N9 A A 508 -102.031 31.979 -56.019 1.00 27.51 N
ATOM 15 C8 A A 508 -101.643 32.733 -54.947 1.00 27.51 C
ATOM 16 N7 A A 508 -100.722 32.164 -54.214 1.00 27.51 N
ATOM 17 C5 A A 508 -100.484 30.960 -54.845 1.00 27.51 C
ATOM 18 C6 A A 508 -99.619 29.907 -54.547 1.00 27.51 C
ATOM 19 N6 A A 508 -98.800 29.909 -53.498 1.00 27.51 N
ATOM 20 N1 A A 508 -99.619 28.842 -55.365 1.00 27.51 N
ATOM 21 C2 A A 508 -100.433 28.854 -56.415 1.00 27.51 C
ATOM 22 N3 A A 508 -101.297 29.783 -56.795 1.00 27.51 N
ATOM 23 C4 A A 508 -101.278 30.830 -55.960 1.00 27.51 C
ATOM 24 P C A 509 -106.999 34.784 -55.573 1.00 27.67 P
ATOM 25 OP1 C A 509 -107.065 35.460 -56.885 1.00 27.67 O
ATOM 26 OP2 C A 509 -106.253 35.438 -54.469 1.00 27.67 O
ATOM 27 O5' C A 509 -108.467 34.400 -55.084 1.00 27.67 O
TER
ATOM 1 O3' A B 508 -106.320 33.356 -55.832 1.00 27.69 O
ATOM 2 P C B 509 -106.999 34.784 -55.573 1.00 27.67 P
ATOM 3 OP1 C B 509 -107.065 35.460 -56.885 1.00 27.67 O
ATOM 4 OP2 C B 509 -106.253 35.438 -54.469 1.00 27.67 O
ATOM 5 O5' C B 509 -108.467 34.400 -55.084 1.00 27.67 O
ATOM 6 C5' C B 509 -108.714 33.962 -53.752 1.00 27.67 C
ATOM 7 C4' C B 509 -110.001 33.188 -53.667 1.00 27.67 C
ATOM 8 O4' C B 509 -109.865 31.944 -54.404 1.00 27.67 O
ATOM 9 C3' C B 509 -110.445 32.792 -52.263 1.00 27.67 C
ATOM 10 O3' C B 509 -111.858 32.831 -52.193 1.00 27.67 O
ATOM 11 C2' C B 509 -110.010 31.348 -52.163 1.00 27.67 C
ATOM 12 O2' C B 509 -110.731 30.599 -51.209 1.00 27.67 O
ATOM 13 C1' C B 509 -110.285 30.877 -53.579 1.00 27.67 C
ATOM 14 N1 C B 509 -109.556 29.659 -53.976 1.00 27.71 N
ATOM 15 C2 C B 509 -110.068 28.958 -55.069 1.00 27.71 C
ATOM 16 O2 C B 509 -111.087 29.401 -55.610 1.00 27.71 O
ATOM 17 N3 C B 509 -109.460 27.835 -55.509 1.00 27.71 N
ATOM 18 C4 C B 509 -108.369 27.422 -54.873 1.00 27.71 C
ATOM 19 N4 C B 509 -107.785 26.321 -55.329 1.00 27.71 N
ATOM 20 C5 C B 509 -107.812 28.106 -53.744 1.00 27.71 C
ATOM 21 C6 C B 509 -108.432 29.217 -53.330 1.00 27.71 C
ATOM 22 P U B 510 -112.580 33.821 -51.179 1.00 38.09 P
ATOM 23 OP1 U B 510 -112.675 35.145 -51.868 1.00 38.09 O
ATOM 24 OP2 U B 510 -111.851 33.737 -49.882 1.00 38.09 O
ATOM 25 O5' U B 510 -114.024 33.170 -51.036 1.00 38.09 O
TER
Atoms:
OP1: (-102.325,38.024,-55.399)
OP2: (-100.976,36.527,-53.863)
C3': (-104.910,33.243,-55.909)
C1': (-103.038,32.344,-57.027)
C5': (-104.011,35.678,-56.091)
O4': (-103.009,33.746,-57.198)
C8: (-101.643,32.733,-54.947)
O2': (-105.222,31.689,-57.738)
C6: (-99.619,29.907,-54.547)
C5: (-100.484,30.960,-54.845)
C4: (-101.278,30.830,-55.960)
P: (-101.799,36.682,-55.073)
C4': (-104.266,34.332,-56.764)
C2': (-104.444,31.962,-56.585)
C2: (-100.433,28.854,-56.415)
N1: (-99.619,28.842,-55.365)
N3: (-101.297,29.783,-56.795)
N6: (-98.800,29.909,-53.498)
N7: (-100.722,32.164,-54.214)
N9: (-102.031,31.979,-56.019)
O5': (-102.992,35.615,-55.088)
O3': (-106.320,33.356,-55.832)
OP2: (-100.976,36.527,-53.863)
C3': (-104.910,33.243,-55.909)
C1': (-103.038,32.344,-57.027)
C5': (-104.011,35.678,-56.091)
O4': (-103.009,33.746,-57.198)
C8: (-101.643,32.733,-54.947)
O2': (-105.222,31.689,-57.738)
C6: (-99.619,29.907,-54.547)
C5: (-100.484,30.960,-54.845)
C4: (-101.278,30.830,-55.960)
P: (-101.799,36.682,-55.073)
C4': (-104.266,34.332,-56.764)
C2': (-104.444,31.962,-56.585)
C2: (-100.433,28.854,-56.415)
N1: (-99.619,28.842,-55.365)
N3: (-101.297,29.783,-56.795)
N6: (-98.800,29.909,-53.498)
N7: (-100.722,32.164,-54.214)
N9: (-102.031,31.979,-56.019)
O5': (-102.992,35.615,-55.088)
O3': (-106.320,33.356,-55.832)
C2: (-110.068,28.958,-55.069)
OP1: (-107.065,35.460,-56.885)
OP2: (-106.253,35.438,-54.469)
C4: (-108.369,27.422,-54.873)
O5': (-108.467,34.400,-55.084)
C3': (-110.445,32.792,-52.263)
C1': (-110.285,30.877,-53.579)
O4': (-109.865,31.944,-54.404)
C5': (-108.714,33.962,-53.752)
P: (-106.999,34.784,-55.573)
O2: (-111.087,29.401,-55.610)
C4': (-110.001,33.188,-53.667)
C2': (-110.010,31.348,-52.163)
O2': (-110.731,30.599,-51.209)
N1: (-109.556,29.659,-53.976)
N3: (-109.460,27.835,-55.509)
N4: (-107.785,26.321,-55.329)
C6: (-108.432,29.217,-53.330)
C5: (-107.812,28.106,-53.744)
O3': (-111.858,32.831,-52.193)
OP1: (-107.065,35.460,-56.885)
OP2: (-106.253,35.438,-54.469)
C4: (-108.369,27.422,-54.873)
O5': (-108.467,34.400,-55.084)
C3': (-110.445,32.792,-52.263)
C1': (-110.285,30.877,-53.579)
O4': (-109.865,31.944,-54.404)
C5': (-108.714,33.962,-53.752)
P: (-106.999,34.784,-55.573)
O2: (-111.087,29.401,-55.610)
C4': (-110.001,33.188,-53.667)
C2': (-110.010,31.348,-52.163)
O2': (-110.731,30.599,-51.209)
N1: (-109.556,29.659,-53.976)
N3: (-109.460,27.835,-55.509)
N4: (-107.785,26.321,-55.329)
C6: (-108.432,29.217,-53.330)
C5: (-107.812,28.106,-53.744)
O3': (-111.858,32.831,-52.193)
Image (generated by PyMOL):