ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1K9M:A69:A88

Extra

PDB:
ATOM 1 O3' G A 68 31.377 149.297 20.323 1.00 56.76 O
ATOM 2 P G A 69 29.999 149.774 19.655 1.00 56.30 P
ATOM 3 OP1 G A 69 28.870 148.984 20.213 1.00 55.93 O
ATOM 4 OP2 G A 69 30.228 149.793 18.182 1.00 57.13 O
ATOM 5 O5' G A 69 29.844 151.266 20.195 1.00 54.83 O
ATOM 6 C5' G A 69 29.789 151.524 21.614 1.00 53.15 C
ATOM 7 C4' G A 69 30.167 152.947 21.913 1.00 51.44 C
ATOM 8 O4' G A 69 31.515 153.234 21.479 1.00 51.12 O
ATOM 9 C3' G A 69 29.300 153.986 21.243 1.00 50.86 C
ATOM 10 O3' G A 69 28.123 154.141 22.033 1.00 48.56 O
ATOM 11 C2' G A 69 30.215 155.206 21.217 1.00 52.55 C
ATOM 12 O2' G A 69 30.250 155.907 22.448 1.00 54.64 O
ATOM 13 C1' G A 69 31.582 154.556 20.988 1.00 53.46 C
ATOM 14 N9 G A 69 31.983 154.496 19.583 1.00 56.21 N
ATOM 15 C8 G A 69 31.577 153.578 18.646 1.00 57.56 C
ATOM 16 N7 G A 69 32.124 153.761 17.472 1.00 58.39 N
ATOM 17 C5 G A 69 32.942 154.863 17.637 1.00 57.89 C
ATOM 18 C6 G A 69 33.792 155.515 16.706 1.00 58.10 C
ATOM 19 O6 G A 69 34.001 155.223 15.521 1.00 56.15 O
ATOM 20 N1 G A 69 34.437 156.610 17.281 1.00 58.52 N
ATOM 21 C2 G A 69 34.278 157.019 18.581 1.00 59.00 C
ATOM 22 N2 G A 69 34.959 158.106 18.944 1.00 59.72 N
ATOM 23 N3 G A 69 33.499 156.409 19.465 1.00 59.17 N
ATOM 24 C4 G A 69 32.862 155.345 18.929 1.00 57.62 C
ATOM 25 P A A 70 27.016 155.230 21.644 1.00 46.98 P
ATOM 26 OP1 A A 70 25.719 154.683 22.105 1.00 47.52 O
ATOM 27 OP2 A A 70 27.176 155.605 20.212 1.00 47.44 O
ATOM 28 O5' A A 70 27.400 156.480 22.563 1.00 47.67 O
TER

ATOM 1 O3' G B 87 37.606 159.274 18.114 1.00 59.53 O
ATOM 2 P A B 88 38.914 158.393 18.461 1.00 57.52 P
ATOM 3 OP1 A B 88 40.035 158.724 17.541 1.00 56.66 O
ATOM 4 OP2 A B 88 38.516 156.985 18.643 1.00 57.30 O
ATOM 5 O5' A B 88 39.313 158.927 19.899 1.00 57.03 O
ATOM 6 C5' A B 88 40.083 160.123 20.038 1.00 54.95 C
ATOM 7 C4' A B 88 39.855 160.724 21.398 1.00 54.58 C
ATOM 8 O4' A B 88 38.503 161.247 21.504 1.00 55.37 O
ATOM 9 C3' A B 88 39.952 159.745 22.547 1.00 53.82 C
ATOM 10 O3' A B 88 41.295 159.522 22.904 1.00 54.07 O
ATOM 11 C2' A B 88 39.194 160.485 23.628 1.00 54.19 C
ATOM 12 O2' A B 88 39.969 161.564 24.128 1.00 52.57 O
ATOM 13 C1' A B 88 38.016 161.029 22.817 1.00 54.70 C
ATOM 14 N9 A B 88 36.956 160.029 22.725 1.00 55.96 N
ATOM 15 C8 A B 88 36.613 159.283 21.621 1.00 55.51 C
ATOM 16 N7 A B 88 35.639 158.433 21.838 1.00 56.41 N
ATOM 17 C5 A B 88 35.312 158.634 23.172 1.00 56.90 C
ATOM 18 C6 A B 88 34.356 158.036 24.009 1.00 57.30 C
ATOM 19 N6 A B 88 33.529 157.073 23.604 1.00 58.21 N
ATOM 20 N1 A B 88 34.281 158.465 25.293 1.00 57.53 N
ATOM 21 C2 A B 88 35.114 159.435 25.695 1.00 57.52 C
ATOM 22 N3 A B 88 36.055 160.078 25.001 1.00 57.91 N
ATOM 23 C4 A B 88 36.107 159.622 23.731 1.00 57.22 C
ATOM 24 P A B 89 41.773 158.036 23.279 1.00 54.82 P
ATOM 25 OP1 A B 89 43.185 158.146 23.727 1.00 55.12 O
ATOM 26 OP2 A B 89 41.435 157.113 22.165 1.00 56.02 O
ATOM 27 O5' A B 89 40.852 157.644 24.528 1.00 56.22 O
TER

Atoms:
OP1: (28.870,148.984,20.213)
OP2: (30.228,149.793,18.182)
C3': (29.300,153.986,21.243)
C1': (31.582,154.556,20.988)
C5': (29.789,151.524,21.614)
O6: (34.001,155.223,15.521)
O4': (31.515,153.234,21.479)
C8: (31.577,153.578,18.646)
C2: (34.278,157.019,18.581)
C6: (33.792,155.515,16.706)
C5: (32.942,154.863,17.637)
C4: (32.862,155.345,18.929)
P: (29.999,149.774,19.655)
C4': (30.167,152.947,21.913)
C2': (30.215,155.206,21.217)
O2': (30.250,155.907,22.448)
N1: (34.437,156.610,17.281)
N2: (34.959,158.106,18.944)
N3: (33.499,156.409,19.465)
N7: (32.124,153.761,17.472)
N9: (31.983,154.496,19.583)
O5': (29.844,151.266,20.195)
O3': (28.123,154.141,22.033)
OP1: (40.035,158.724,17.541)
OP2: (38.516,156.985,18.643)
C3': (39.952,159.745,22.547)
C1': (38.016,161.029,22.817)
C5': (40.083,160.123,20.038)
O4': (38.503,161.247,21.504)
C8: (36.613,159.283,21.621)
O2': (39.969,161.564,24.128)
C6: (34.356,158.036,24.009)
C5: (35.312,158.634,23.172)
C4: (36.107,159.622,23.731)
P: (38.914,158.393,18.461)
C4': (39.855,160.724,21.398)
C2': (39.194,160.485,23.628)
C2: (35.114,159.435,25.695)
N1: (34.281,158.465,25.293)
N3: (36.055,160.078,25.001)
N6: (33.529,157.073,23.604)
N7: (35.639,158.433,21.838)
N9: (36.956,160.029,22.725)
O5': (39.313,158.927,19.899)
O3': (41.295,159.522,22.904)
Image (generated by PyMOL):
PyMOL image
show in jmol