Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A2850:A2853
Extra
PDB:
ATOM 1 O3' A A2849 -0.219 -30.791 -46.995 1.00 12.61 O
ATOM 2 P G A2850 1.043 -30.202 -46.191 1.00 22.03 P
ATOM 3 OP1 G A2850 1.608 -29.115 -47.036 1.00 22.03 O
ATOM 4 OP2 G A2850 1.906 -31.358 -45.815 1.00 22.03 O
ATOM 5 O5' G A2850 0.375 -29.584 -44.872 1.00 22.03 O
ATOM 6 C5' G A2850 -0.542 -28.491 -44.959 1.00 22.03 C
ATOM 7 C4' G A2850 -1.701 -28.598 -43.976 1.00 22.03 C
ATOM 8 O4' G A2850 -2.418 -29.861 -44.132 1.00 22.03 O
ATOM 9 C3' G A2850 -1.362 -28.577 -42.496 1.00 22.03 C
ATOM 10 O3' G A2850 -0.988 -27.299 -42.014 1.00 22.03 O
ATOM 11 C2' G A2850 -2.656 -29.080 -41.901 1.00 22.03 C
ATOM 12 O2' G A2850 -3.653 -28.080 -41.967 1.00 22.03 O
ATOM 13 C1' G A2850 -3.005 -30.208 -42.882 1.00 22.03 C
ATOM 14 N9 G A2850 -2.420 -31.464 -42.401 1.00 21.90 N
ATOM 15 C8 G A2850 -1.239 -32.034 -42.775 1.00 21.90 C
ATOM 16 N7 G A2850 -0.919 -33.087 -42.066 1.00 21.90 N
ATOM 17 C5 G A2850 -1.938 -33.183 -41.136 1.00 21.90 C
ATOM 18 C6 G A2850 -2.111 -34.126 -40.100 1.00 21.90 C
ATOM 19 O6 G A2850 -1.365 -35.073 -39.840 1.00 21.90 O
ATOM 20 N1 G A2850 -3.265 -33.874 -39.361 1.00 21.90 N
ATOM 21 C2 G A2850 -4.124 -32.846 -39.618 1.00 21.90 C
ATOM 22 N2 G A2850 -5.176 -32.767 -38.813 1.00 21.90 N
ATOM 23 N3 G A2850 -3.980 -31.962 -40.591 1.00 21.90 N
ATOM 24 C4 G A2850 -2.863 -32.179 -41.310 1.00 21.90 C
ATOM 25 P C A2851 0.576 -26.893 -41.889 1.00 2.25 P
ATOM 26 OP1 C A2851 0.688 -25.504 -42.465 1.00 2.25 O
ATOM 27 OP2 C A2851 1.365 -28.027 -42.508 1.00 2.25 O
ATOM 28 O5' C A2851 0.841 -26.862 -40.311 1.00 2.25 O
TER
ATOM 1 O3' G B2852 -4.400 -32.558 -34.443 1.00 4.07 O
ATOM 2 P A B2853 -5.118 -33.908 -34.973 1.00 7.56 P
ATOM 3 OP1 A B2853 -4.796 -34.986 -34.014 1.00 7.56 O
ATOM 4 OP2 A B2853 -4.724 -34.094 -36.406 1.00 7.56 O
ATOM 5 O5' A B2853 -6.665 -33.541 -34.874 1.00 7.56 O
ATOM 6 C5' A B2853 -7.302 -33.433 -33.608 1.00 7.56 C
ATOM 7 C4' A B2853 -8.588 -32.678 -33.714 1.00 7.56 C
ATOM 8 O4' A B2853 -8.328 -31.376 -34.279 1.00 7.56 O
ATOM 9 C3' A B2853 -9.631 -33.286 -34.637 1.00 7.56 C
ATOM 10 O3' A B2853 -10.389 -34.284 -34.019 1.00 7.56 O
ATOM 11 C2' A B2853 -10.458 -32.096 -35.063 1.00 7.56 C
ATOM 12 O2' A B2853 -11.445 -31.774 -34.078 1.00 7.56 O
ATOM 13 C1' A B2853 -9.391 -30.996 -35.125 1.00 7.56 C
ATOM 14 N9 A B2853 -8.866 -30.863 -36.482 1.00 7.22 N
ATOM 15 C8 A B2853 -8.004 -31.721 -37.123 1.00 7.22 C
ATOM 16 N7 A B2853 -7.744 -31.358 -38.367 1.00 7.22 N
ATOM 17 C5 A B2853 -8.495 -30.200 -38.525 1.00 7.22 C
ATOM 18 C6 A B2853 -8.650 -29.352 -39.610 1.00 7.22 C
ATOM 19 N6 A B2853 -8.020 -29.551 -40.767 1.00 7.22 N
ATOM 20 N1 A B2853 -9.466 -28.305 -39.464 1.00 7.22 N
ATOM 21 C2 A B2853 -10.064 -28.145 -38.284 1.00 7.22 C
ATOM 22 N3 A B2853 -10.006 -28.870 -37.174 1.00 7.22 N
ATOM 23 C4 A B2853 -9.194 -29.892 -37.377 1.00 7.22 C
ATOM 24 P U B2854 -10.253 -35.777 -34.526 1.00 0.01 P
ATOM 25 OP1 U B2854 -11.465 -36.501 -34.076 1.00 0.01 O
ATOM 26 OP2 U B2854 -8.915 -36.254 -34.068 1.00 0.01 O
ATOM 27 O5' U B2854 -10.291 -35.620 -36.108 1.00 0.01 O
TER
ATOM 2 P G A2850 1.043 -30.202 -46.191 1.00 22.03 P
ATOM 3 OP1 G A2850 1.608 -29.115 -47.036 1.00 22.03 O
ATOM 4 OP2 G A2850 1.906 -31.358 -45.815 1.00 22.03 O
ATOM 5 O5' G A2850 0.375 -29.584 -44.872 1.00 22.03 O
ATOM 6 C5' G A2850 -0.542 -28.491 -44.959 1.00 22.03 C
ATOM 7 C4' G A2850 -1.701 -28.598 -43.976 1.00 22.03 C
ATOM 8 O4' G A2850 -2.418 -29.861 -44.132 1.00 22.03 O
ATOM 9 C3' G A2850 -1.362 -28.577 -42.496 1.00 22.03 C
ATOM 10 O3' G A2850 -0.988 -27.299 -42.014 1.00 22.03 O
ATOM 11 C2' G A2850 -2.656 -29.080 -41.901 1.00 22.03 C
ATOM 12 O2' G A2850 -3.653 -28.080 -41.967 1.00 22.03 O
ATOM 13 C1' G A2850 -3.005 -30.208 -42.882 1.00 22.03 C
ATOM 14 N9 G A2850 -2.420 -31.464 -42.401 1.00 21.90 N
ATOM 15 C8 G A2850 -1.239 -32.034 -42.775 1.00 21.90 C
ATOM 16 N7 G A2850 -0.919 -33.087 -42.066 1.00 21.90 N
ATOM 17 C5 G A2850 -1.938 -33.183 -41.136 1.00 21.90 C
ATOM 18 C6 G A2850 -2.111 -34.126 -40.100 1.00 21.90 C
ATOM 19 O6 G A2850 -1.365 -35.073 -39.840 1.00 21.90 O
ATOM 20 N1 G A2850 -3.265 -33.874 -39.361 1.00 21.90 N
ATOM 21 C2 G A2850 -4.124 -32.846 -39.618 1.00 21.90 C
ATOM 22 N2 G A2850 -5.176 -32.767 -38.813 1.00 21.90 N
ATOM 23 N3 G A2850 -3.980 -31.962 -40.591 1.00 21.90 N
ATOM 24 C4 G A2850 -2.863 -32.179 -41.310 1.00 21.90 C
ATOM 25 P C A2851 0.576 -26.893 -41.889 1.00 2.25 P
ATOM 26 OP1 C A2851 0.688 -25.504 -42.465 1.00 2.25 O
ATOM 27 OP2 C A2851 1.365 -28.027 -42.508 1.00 2.25 O
ATOM 28 O5' C A2851 0.841 -26.862 -40.311 1.00 2.25 O
TER
ATOM 1 O3' G B2852 -4.400 -32.558 -34.443 1.00 4.07 O
ATOM 2 P A B2853 -5.118 -33.908 -34.973 1.00 7.56 P
ATOM 3 OP1 A B2853 -4.796 -34.986 -34.014 1.00 7.56 O
ATOM 4 OP2 A B2853 -4.724 -34.094 -36.406 1.00 7.56 O
ATOM 5 O5' A B2853 -6.665 -33.541 -34.874 1.00 7.56 O
ATOM 6 C5' A B2853 -7.302 -33.433 -33.608 1.00 7.56 C
ATOM 7 C4' A B2853 -8.588 -32.678 -33.714 1.00 7.56 C
ATOM 8 O4' A B2853 -8.328 -31.376 -34.279 1.00 7.56 O
ATOM 9 C3' A B2853 -9.631 -33.286 -34.637 1.00 7.56 C
ATOM 10 O3' A B2853 -10.389 -34.284 -34.019 1.00 7.56 O
ATOM 11 C2' A B2853 -10.458 -32.096 -35.063 1.00 7.56 C
ATOM 12 O2' A B2853 -11.445 -31.774 -34.078 1.00 7.56 O
ATOM 13 C1' A B2853 -9.391 -30.996 -35.125 1.00 7.56 C
ATOM 14 N9 A B2853 -8.866 -30.863 -36.482 1.00 7.22 N
ATOM 15 C8 A B2853 -8.004 -31.721 -37.123 1.00 7.22 C
ATOM 16 N7 A B2853 -7.744 -31.358 -38.367 1.00 7.22 N
ATOM 17 C5 A B2853 -8.495 -30.200 -38.525 1.00 7.22 C
ATOM 18 C6 A B2853 -8.650 -29.352 -39.610 1.00 7.22 C
ATOM 19 N6 A B2853 -8.020 -29.551 -40.767 1.00 7.22 N
ATOM 20 N1 A B2853 -9.466 -28.305 -39.464 1.00 7.22 N
ATOM 21 C2 A B2853 -10.064 -28.145 -38.284 1.00 7.22 C
ATOM 22 N3 A B2853 -10.006 -28.870 -37.174 1.00 7.22 N
ATOM 23 C4 A B2853 -9.194 -29.892 -37.377 1.00 7.22 C
ATOM 24 P U B2854 -10.253 -35.777 -34.526 1.00 0.01 P
ATOM 25 OP1 U B2854 -11.465 -36.501 -34.076 1.00 0.01 O
ATOM 26 OP2 U B2854 -8.915 -36.254 -34.068 1.00 0.01 O
ATOM 27 O5' U B2854 -10.291 -35.620 -36.108 1.00 0.01 O
TER
Atoms:
OP1: (1.608,-29.115,-47.036)
OP2: (1.906,-31.358,-45.815)
C3': (-1.362,-28.577,-42.496)
C1': (-3.005,-30.208,-42.882)
C5': (-0.542,-28.491,-44.959)
O6: (-1.365,-35.073,-39.840)
O4': (-2.418,-29.861,-44.132)
C8: (-1.239,-32.034,-42.775)
C2: (-4.124,-32.846,-39.618)
C6: (-2.111,-34.126,-40.100)
C5: (-1.938,-33.183,-41.136)
C4: (-2.863,-32.179,-41.310)
P: (1.043,-30.202,-46.191)
C4': (-1.701,-28.598,-43.976)
C2': (-2.656,-29.080,-41.901)
O2': (-3.653,-28.080,-41.967)
N1: (-3.265,-33.874,-39.361)
N2: (-5.176,-32.767,-38.813)
N3: (-3.980,-31.962,-40.591)
N7: (-0.919,-33.087,-42.066)
N9: (-2.420,-31.464,-42.401)
O5': (0.375,-29.584,-44.872)
O3': (-0.988,-27.299,-42.014)
OP2: (1.906,-31.358,-45.815)
C3': (-1.362,-28.577,-42.496)
C1': (-3.005,-30.208,-42.882)
C5': (-0.542,-28.491,-44.959)
O6: (-1.365,-35.073,-39.840)
O4': (-2.418,-29.861,-44.132)
C8: (-1.239,-32.034,-42.775)
C2: (-4.124,-32.846,-39.618)
C6: (-2.111,-34.126,-40.100)
C5: (-1.938,-33.183,-41.136)
C4: (-2.863,-32.179,-41.310)
P: (1.043,-30.202,-46.191)
C4': (-1.701,-28.598,-43.976)
C2': (-2.656,-29.080,-41.901)
O2': (-3.653,-28.080,-41.967)
N1: (-3.265,-33.874,-39.361)
N2: (-5.176,-32.767,-38.813)
N3: (-3.980,-31.962,-40.591)
N7: (-0.919,-33.087,-42.066)
N9: (-2.420,-31.464,-42.401)
O5': (0.375,-29.584,-44.872)
O3': (-0.988,-27.299,-42.014)
OP1: (-4.796,-34.986,-34.014)
OP2: (-4.724,-34.094,-36.406)
C3': (-9.631,-33.286,-34.637)
C1': (-9.391,-30.996,-35.125)
C5': (-7.302,-33.433,-33.608)
O4': (-8.328,-31.376,-34.279)
C8: (-8.004,-31.721,-37.123)
O2': (-11.445,-31.774,-34.078)
C6: (-8.650,-29.352,-39.610)
C5: (-8.495,-30.200,-38.525)
C4: (-9.194,-29.892,-37.377)
P: (-5.118,-33.908,-34.973)
C4': (-8.588,-32.678,-33.714)
C2': (-10.458,-32.096,-35.063)
C2: (-10.064,-28.145,-38.284)
N1: (-9.466,-28.305,-39.464)
N3: (-10.006,-28.870,-37.174)
N6: (-8.020,-29.551,-40.767)
N7: (-7.744,-31.358,-38.367)
N9: (-8.866,-30.863,-36.482)
O5': (-6.665,-33.541,-34.874)
O3': (-10.389,-34.284,-34.019)
OP2: (-4.724,-34.094,-36.406)
C3': (-9.631,-33.286,-34.637)
C1': (-9.391,-30.996,-35.125)
C5': (-7.302,-33.433,-33.608)
O4': (-8.328,-31.376,-34.279)
C8: (-8.004,-31.721,-37.123)
O2': (-11.445,-31.774,-34.078)
C6: (-8.650,-29.352,-39.610)
C5: (-8.495,-30.200,-38.525)
C4: (-9.194,-29.892,-37.377)
P: (-5.118,-33.908,-34.973)
C4': (-8.588,-32.678,-33.714)
C2': (-10.458,-32.096,-35.063)
C2: (-10.064,-28.145,-38.284)
N1: (-9.466,-28.305,-39.464)
N3: (-10.006,-28.870,-37.174)
N6: (-8.020,-29.551,-40.767)
N7: (-7.744,-31.358,-38.367)
N9: (-8.866,-30.863,-36.482)
O5': (-6.665,-33.541,-34.874)
O3': (-10.389,-34.284,-34.019)
Image (generated by PyMOL):