Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1180:A818
Extra
PDB:
ATOM 1 O3' G A1179 -92.712 -96.628 19.613 1.00 0.01 O
ATOM 2 P G A1180 -92.242 -95.992 20.999 1.00 0.01 P
ATOM 3 OP1 G A1180 -90.824 -96.316 21.163 1.00 0.01 O
ATOM 4 OP2 G A1180 -93.172 -96.426 22.001 1.00 0.01 O
ATOM 5 O5' G A1180 -92.408 -94.434 20.755 1.00 0.01 O
ATOM 6 C5' G A1180 -91.386 -93.690 20.097 1.00 0.01 C
ATOM 7 C4' G A1180 -91.697 -92.210 20.028 1.00 0.01 C
ATOM 8 O4' G A1180 -93.028 -92.022 19.532 1.00 0.01 O
ATOM 9 C3' G A1180 -91.627 -91.444 21.344 1.00 0.01 C
ATOM 10 O3' G A1180 -90.303 -90.927 21.593 1.00 0.01 O
ATOM 11 C2' G A1180 -92.676 -90.368 21.163 1.00 0.01 C
ATOM 12 O2' G A1180 -92.126 -89.266 20.488 1.00 0.01 O
ATOM 13 C1' G A1180 -93.678 -91.024 20.228 1.00 0.01 C
ATOM 14 N9 G A1180 -94.826 -91.630 20.923 1.00 0.01 N
ATOM 15 C8 G A1180 -94.989 -92.962 21.142 1.00 0.01 C
ATOM 16 N7 G A1180 -96.107 -93.287 21.723 1.00 0.01 N
ATOM 17 C5 G A1180 -96.748 -92.101 21.863 1.00 0.01 C
ATOM 18 C6 G A1180 -97.991 -91.849 22.437 1.00 0.01 C
ATOM 19 O6 G A1180 -98.786 -92.633 22.931 1.00 0.01 O
ATOM 20 N1 G A1180 -98.285 -90.512 22.403 1.00 0.01 N
ATOM 21 C2 G A1180 -97.478 -89.572 21.900 1.00 0.01 C
ATOM 22 N2 G A1180 -97.981 -88.353 21.949 1.00 0.01 N
ATOM 23 N3 G A1180 -96.311 -89.783 21.368 1.00 0.01 N
ATOM 24 C4 G A1180 -96.000 -91.074 21.369 1.00 0.01 C
ATOM 25 P U A1181 -90.008 -89.845 22.749 1.00 0.01 P
ATOM 26 OP1 U A1181 -88.616 -89.992 23.146 1.00 0.01 O
ATOM 27 OP2 U A1181 -91.034 -90.005 23.755 1.00 0.01 O
ATOM 28 O5' U A1181 -90.197 -88.476 22.015 1.00 0.01 O
TER
ATOM 1 O3' G B 817 -100.828 -87.926 25.105 1.00 0.01 O
ATOM 2 P A B 818 -100.696 -87.387 23.628 1.00 0.01 P
ATOM 3 OP1 A B 818 -101.380 -88.352 22.758 1.00 0.01 O
ATOM 4 OP2 A B 818 -99.303 -87.117 23.401 1.00 0.01 O
ATOM 5 O5' A B 818 -101.434 -86.027 23.662 1.00 0.01 O
ATOM 6 C5' A B 818 -100.690 -84.854 23.385 1.00 0.01 C
ATOM 7 C4' A B 818 -100.411 -84.063 24.631 1.00 0.01 C
ATOM 8 O4' A B 818 -99.054 -84.266 25.080 1.00 0.01 O
ATOM 9 C3' A B 818 -100.488 -82.579 24.483 1.00 0.01 C
ATOM 10 O3' A B 818 -101.805 -82.115 24.390 1.00 0.01 O
ATOM 11 C2' A B 818 -99.742 -82.112 25.711 1.00 0.01 C
ATOM 12 O2' A B 818 -100.517 -82.302 26.880 1.00 0.01 O
ATOM 13 C1' A B 818 -98.597 -83.100 25.726 1.00 0.01 C
ATOM 14 N9 A B 818 -97.456 -82.598 24.987 1.00 0.01 N
ATOM 15 C8 A B 818 -96.825 -83.205 23.960 1.00 0.01 C
ATOM 16 N7 A B 818 -95.839 -82.533 23.440 1.00 0.01 N
ATOM 17 C5 A B 818 -95.849 -81.400 24.182 1.00 0.01 C
ATOM 18 C6 A B 818 -95.042 -80.285 24.130 1.00 0.01 C
ATOM 19 N6 A B 818 -94.045 -80.142 23.269 1.00 0.01 N
ATOM 20 N1 A B 818 -95.281 -79.300 24.991 1.00 0.01 N
ATOM 21 C2 A B 818 -96.284 -79.451 25.836 1.00 0.01 C
ATOM 22 N3 A B 818 -97.109 -80.478 25.969 1.00 0.01 N
ATOM 23 C4 A B 818 -96.832 -81.430 25.116 1.00 0.01 C
ATOM 24 P A B 819 -102.331 -81.573 22.998 1.00 0.01 P
ATOM 25 OP1 A B 819 -103.773 -81.758 22.972 1.00 0.01 O
ATOM 26 OP2 A B 819 -101.512 -82.188 21.944 1.00 0.01 O
ATOM 27 O5' A B 819 -101.994 -80.064 23.114 1.00 0.01 O
TER
ATOM 2 P G A1180 -92.242 -95.992 20.999 1.00 0.01 P
ATOM 3 OP1 G A1180 -90.824 -96.316 21.163 1.00 0.01 O
ATOM 4 OP2 G A1180 -93.172 -96.426 22.001 1.00 0.01 O
ATOM 5 O5' G A1180 -92.408 -94.434 20.755 1.00 0.01 O
ATOM 6 C5' G A1180 -91.386 -93.690 20.097 1.00 0.01 C
ATOM 7 C4' G A1180 -91.697 -92.210 20.028 1.00 0.01 C
ATOM 8 O4' G A1180 -93.028 -92.022 19.532 1.00 0.01 O
ATOM 9 C3' G A1180 -91.627 -91.444 21.344 1.00 0.01 C
ATOM 10 O3' G A1180 -90.303 -90.927 21.593 1.00 0.01 O
ATOM 11 C2' G A1180 -92.676 -90.368 21.163 1.00 0.01 C
ATOM 12 O2' G A1180 -92.126 -89.266 20.488 1.00 0.01 O
ATOM 13 C1' G A1180 -93.678 -91.024 20.228 1.00 0.01 C
ATOM 14 N9 G A1180 -94.826 -91.630 20.923 1.00 0.01 N
ATOM 15 C8 G A1180 -94.989 -92.962 21.142 1.00 0.01 C
ATOM 16 N7 G A1180 -96.107 -93.287 21.723 1.00 0.01 N
ATOM 17 C5 G A1180 -96.748 -92.101 21.863 1.00 0.01 C
ATOM 18 C6 G A1180 -97.991 -91.849 22.437 1.00 0.01 C
ATOM 19 O6 G A1180 -98.786 -92.633 22.931 1.00 0.01 O
ATOM 20 N1 G A1180 -98.285 -90.512 22.403 1.00 0.01 N
ATOM 21 C2 G A1180 -97.478 -89.572 21.900 1.00 0.01 C
ATOM 22 N2 G A1180 -97.981 -88.353 21.949 1.00 0.01 N
ATOM 23 N3 G A1180 -96.311 -89.783 21.368 1.00 0.01 N
ATOM 24 C4 G A1180 -96.000 -91.074 21.369 1.00 0.01 C
ATOM 25 P U A1181 -90.008 -89.845 22.749 1.00 0.01 P
ATOM 26 OP1 U A1181 -88.616 -89.992 23.146 1.00 0.01 O
ATOM 27 OP2 U A1181 -91.034 -90.005 23.755 1.00 0.01 O
ATOM 28 O5' U A1181 -90.197 -88.476 22.015 1.00 0.01 O
TER
ATOM 1 O3' G B 817 -100.828 -87.926 25.105 1.00 0.01 O
ATOM 2 P A B 818 -100.696 -87.387 23.628 1.00 0.01 P
ATOM 3 OP1 A B 818 -101.380 -88.352 22.758 1.00 0.01 O
ATOM 4 OP2 A B 818 -99.303 -87.117 23.401 1.00 0.01 O
ATOM 5 O5' A B 818 -101.434 -86.027 23.662 1.00 0.01 O
ATOM 6 C5' A B 818 -100.690 -84.854 23.385 1.00 0.01 C
ATOM 7 C4' A B 818 -100.411 -84.063 24.631 1.00 0.01 C
ATOM 8 O4' A B 818 -99.054 -84.266 25.080 1.00 0.01 O
ATOM 9 C3' A B 818 -100.488 -82.579 24.483 1.00 0.01 C
ATOM 10 O3' A B 818 -101.805 -82.115 24.390 1.00 0.01 O
ATOM 11 C2' A B 818 -99.742 -82.112 25.711 1.00 0.01 C
ATOM 12 O2' A B 818 -100.517 -82.302 26.880 1.00 0.01 O
ATOM 13 C1' A B 818 -98.597 -83.100 25.726 1.00 0.01 C
ATOM 14 N9 A B 818 -97.456 -82.598 24.987 1.00 0.01 N
ATOM 15 C8 A B 818 -96.825 -83.205 23.960 1.00 0.01 C
ATOM 16 N7 A B 818 -95.839 -82.533 23.440 1.00 0.01 N
ATOM 17 C5 A B 818 -95.849 -81.400 24.182 1.00 0.01 C
ATOM 18 C6 A B 818 -95.042 -80.285 24.130 1.00 0.01 C
ATOM 19 N6 A B 818 -94.045 -80.142 23.269 1.00 0.01 N
ATOM 20 N1 A B 818 -95.281 -79.300 24.991 1.00 0.01 N
ATOM 21 C2 A B 818 -96.284 -79.451 25.836 1.00 0.01 C
ATOM 22 N3 A B 818 -97.109 -80.478 25.969 1.00 0.01 N
ATOM 23 C4 A B 818 -96.832 -81.430 25.116 1.00 0.01 C
ATOM 24 P A B 819 -102.331 -81.573 22.998 1.00 0.01 P
ATOM 25 OP1 A B 819 -103.773 -81.758 22.972 1.00 0.01 O
ATOM 26 OP2 A B 819 -101.512 -82.188 21.944 1.00 0.01 O
ATOM 27 O5' A B 819 -101.994 -80.064 23.114 1.00 0.01 O
TER
Atoms:
OP1: (-90.824,-96.316,21.163)
OP2: (-93.172,-96.426,22.001)
C3': (-91.627,-91.444,21.344)
C1': (-93.678,-91.024,20.228)
C5': (-91.386,-93.690,20.097)
O6: (-98.786,-92.633,22.931)
O4': (-93.028,-92.022,19.532)
C8: (-94.989,-92.962,21.142)
C2: (-97.478,-89.572,21.900)
C6: (-97.991,-91.849,22.437)
C5: (-96.748,-92.101,21.863)
C4: (-96.000,-91.074,21.369)
P: (-92.242,-95.992,20.999)
C4': (-91.697,-92.210,20.028)
C2': (-92.676,-90.368,21.163)
O2': (-92.126,-89.266,20.488)
N1: (-98.285,-90.512,22.403)
N2: (-97.981,-88.353,21.949)
N3: (-96.311,-89.783,21.368)
N7: (-96.107,-93.287,21.723)
N9: (-94.826,-91.630,20.923)
O5': (-92.408,-94.434,20.755)
O3': (-90.303,-90.927,21.593)
OP2: (-93.172,-96.426,22.001)
C3': (-91.627,-91.444,21.344)
C1': (-93.678,-91.024,20.228)
C5': (-91.386,-93.690,20.097)
O6: (-98.786,-92.633,22.931)
O4': (-93.028,-92.022,19.532)
C8: (-94.989,-92.962,21.142)
C2: (-97.478,-89.572,21.900)
C6: (-97.991,-91.849,22.437)
C5: (-96.748,-92.101,21.863)
C4: (-96.000,-91.074,21.369)
P: (-92.242,-95.992,20.999)
C4': (-91.697,-92.210,20.028)
C2': (-92.676,-90.368,21.163)
O2': (-92.126,-89.266,20.488)
N1: (-98.285,-90.512,22.403)
N2: (-97.981,-88.353,21.949)
N3: (-96.311,-89.783,21.368)
N7: (-96.107,-93.287,21.723)
N9: (-94.826,-91.630,20.923)
O5': (-92.408,-94.434,20.755)
O3': (-90.303,-90.927,21.593)
OP1: (-101.380,-88.352,22.758)
OP2: (-99.303,-87.117,23.401)
C3': (-100.488,-82.579,24.483)
C1': (-98.597,-83.100,25.726)
C5': (-100.690,-84.854,23.385)
O4': (-99.054,-84.266,25.080)
C8: (-96.825,-83.205,23.960)
O2': (-100.517,-82.302,26.880)
C6: (-95.042,-80.285,24.130)
C5: (-95.849,-81.400,24.182)
C4: (-96.832,-81.430,25.116)
P: (-100.696,-87.387,23.628)
C4': (-100.411,-84.063,24.631)
C2': (-99.742,-82.112,25.711)
C2: (-96.284,-79.451,25.836)
N1: (-95.281,-79.300,24.991)
N3: (-97.109,-80.478,25.969)
N6: (-94.045,-80.142,23.269)
N7: (-95.839,-82.533,23.440)
N9: (-97.456,-82.598,24.987)
O5': (-101.434,-86.027,23.662)
O3': (-101.805,-82.115,24.390)
OP2: (-99.303,-87.117,23.401)
C3': (-100.488,-82.579,24.483)
C1': (-98.597,-83.100,25.726)
C5': (-100.690,-84.854,23.385)
O4': (-99.054,-84.266,25.080)
C8: (-96.825,-83.205,23.960)
O2': (-100.517,-82.302,26.880)
C6: (-95.042,-80.285,24.130)
C5: (-95.849,-81.400,24.182)
C4: (-96.832,-81.430,25.116)
P: (-100.696,-87.387,23.628)
C4': (-100.411,-84.063,24.631)
C2': (-99.742,-82.112,25.711)
C2: (-96.284,-79.451,25.836)
N1: (-95.281,-79.300,24.991)
N3: (-97.109,-80.478,25.969)
N6: (-94.045,-80.142,23.269)
N7: (-95.839,-82.533,23.440)
N9: (-97.456,-82.598,24.987)
O5': (-101.434,-86.027,23.662)
O3': (-101.805,-82.115,24.390)
Image (generated by PyMOL):