ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5F:61225:61224

Extra

PDB:
ATOM 1 O3' A A1224 231.432 -18.900 320.335 1.00147.16 O
ATOM 2 P U A1225 230.696 -19.848 319.265 1.00157.86 P
ATOM 3 OP1 U A1225 230.322 -18.997 318.111 1.00157.45 O
ATOM 4 OP2 U A1225 229.623 -20.579 319.985 1.00158.50 O
ATOM 5 O5' U A1225 231.852 -20.865 318.848 1.00156.87 O
ATOM 6 C5' U A1225 231.757 -22.249 319.175 1.00156.69 C
ATOM 7 C4' U A1225 233.098 -22.944 319.091 1.00156.01 C
ATOM 8 O4' U A1225 233.791 -22.830 320.364 1.00156.71 O
ATOM 9 C3' U A1225 233.051 -24.445 318.834 1.00155.40 C
ATOM 10 O3' U A1225 232.871 -24.774 317.468 1.00154.45 O
ATOM 11 C2' U A1225 234.375 -24.930 319.413 1.00155.26 C
ATOM 12 O2' U A1225 235.446 -24.675 318.520 1.00154.46 O
ATOM 13 C1' U A1225 234.526 -24.013 320.624 1.00156.32 C
ATOM 14 N1 U A1225 233.999 -24.645 321.858 1.00157.12 N
ATOM 15 C2 U A1225 234.722 -25.707 322.388 1.00156.95 C
ATOM 16 O2 U A1225 235.762 -26.132 321.901 1.00156.21 O
ATOM 17 N3 U A1225 234.174 -26.257 323.526 1.00157.73 N
ATOM 18 C4 U A1225 233.011 -25.878 324.174 1.00158.65 C
ATOM 19 O4 U A1225 232.659 -26.478 325.198 1.00159.30 O
ATOM 20 C5 U A1225 232.328 -24.773 323.563 1.00158.78 C
ATOM 21 C6 U A1225 232.829 -24.216 322.453 1.00158.02 C
ATOM 22 P U A1226 232.034 -26.083 317.050 1.00129.40 P
ATOM 23 OP1 U A1226 231.860 -26.028 315.582 1.00128.52 O
ATOM 24 OP2 U A1226 230.824 -26.129 317.906 1.00130.33 O
ATOM 25 O5' U A1226 233.015 -27.278 317.441 1.00129.02 O
TER

ATOM 1 O3' G B1223 231.974 -21.202 326.720 1.00162.28 O
ATOM 2 P A B1224 230.780 -20.915 325.700 1.00150.62 P
ATOM 3 OP1 A B1224 229.711 -20.240 326.473 1.00151.82 O
ATOM 4 OP2 A B1224 230.471 -22.199 325.020 1.00149.78 O
ATOM 5 O5' A B1224 231.429 -19.891 324.669 1.00149.98 O
ATOM 6 C5' A B1224 231.530 -20.204 323.287 1.00148.82 C
ATOM 7 C4' A B1224 232.395 -19.201 322.569 1.00148.36 C
ATOM 8 O4' A B1224 233.752 -19.282 323.064 1.00148.28 O
ATOM 9 C3' A B1224 232.547 -19.382 321.069 1.00147.17 C
ATOM 10 O3' A B1224 231.432 -18.900 320.335 1.00147.16 O
ATOM 11 C2' A B1224 233.832 -18.619 320.784 1.00146.83 C
ATOM 12 O2' A B1224 233.576 -17.226 320.704 1.00147.32 O
ATOM 13 C1' A B1224 234.649 -18.889 322.053 1.00147.42 C
ATOM 14 N9 A B1224 235.652 -19.952 321.861 1.00146.65 N
ATOM 15 C8 A B1224 236.520 -20.045 320.816 1.00145.66 C
ATOM 16 N7 A B1224 237.342 -21.056 320.832 1.00145.14 N
ATOM 17 C5 A B1224 237.019 -21.680 322.020 1.00145.85 C
ATOM 18 C6 A B1224 237.552 -22.828 322.625 1.00145.77 C
ATOM 19 N6 A B1224 238.540 -23.553 322.103 1.00144.95 N
ATOM 20 N1 A B1224 237.023 -23.200 323.803 1.00146.61 N
ATOM 21 C2 A B1224 236.030 -22.454 324.313 1.00147.48 C
ATOM 22 N3 A B1224 235.442 -21.356 323.846 1.00147.66 N
ATOM 23 C4 A B1224 235.991 -21.007 322.675 1.00146.79 C
ATOM 24 P U B1225 230.696 -19.848 319.265 1.00157.86 P
ATOM 25 OP1 U B1225 230.322 -18.997 318.111 1.00157.45 O
ATOM 26 OP2 U B1225 229.623 -20.579 319.985 1.00158.50 O
ATOM 27 O5' U B1225 231.852 -20.865 318.848 1.00156.87 O
TER

Atoms:
C4: (233.011,-25.878,324.174)
N3: (234.174,-26.257,323.526)
OP1: (230.322,-18.997,318.111)
OP2: (229.623,-20.579,319.985)
C2: (234.722,-25.707,322.388)
C1': (234.526,-24.013,320.624)
C3': (233.051,-24.445,318.834)
O5': (231.852,-20.865,318.848)
O4': (233.791,-22.830,320.364)
C5': (231.757,-22.249,319.175)
P: (230.696,-19.848,319.265)
C4': (233.098,-22.944,319.091)
C2': (234.375,-24.930,319.413)
O2': (235.446,-24.675,318.520)
N1: (233.999,-24.645,321.858)
O4: (232.659,-26.478,325.198)
O2: (235.762,-26.132,321.901)
C6: (232.829,-24.216,322.453)
C5: (232.328,-24.773,323.563)
O3': (232.871,-24.774,317.468)
OP1: (229.711,-20.240,326.473)
OP2: (230.471,-22.199,325.020)
C3': (232.547,-19.382,321.069)
C1': (234.649,-18.889,322.053)
C5': (231.530,-20.204,323.287)
O4': (233.752,-19.282,323.064)
C8: (236.520,-20.045,320.816)
O2': (233.576,-17.226,320.704)
C6: (237.552,-22.828,322.625)
C5: (237.019,-21.680,322.020)
C4: (235.991,-21.007,322.675)
P: (230.780,-20.915,325.700)
C4': (232.395,-19.201,322.569)
C2': (233.832,-18.619,320.784)
C2: (236.030,-22.454,324.313)
N1: (237.023,-23.200,323.803)
N3: (235.442,-21.356,323.846)
N6: (238.540,-23.553,322.103)
N7: (237.342,-21.056,320.832)
N9: (235.652,-19.952,321.861)
O5': (231.429,-19.891,324.669)
O3': (231.432,-18.900,320.335)
Image (generated by PyMOL):
PyMOL image
show in jmol