Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11075:12179
Extra
PDB:
ATOM 1 O3' A A1074 32.188 -10.101 39.278 1.00 38.11 O
ATOM 2 P G A1075 33.129 -10.976 38.281 1.00 42.85 P
ATOM 3 OP1 G A1075 33.064 -10.334 36.910 1.00 43.09 O
ATOM 4 OP2 G A1075 32.743 -12.404 38.450 1.00 42.88 O
ATOM 5 O5' G A1075 34.571 -10.759 38.888 1.00 42.65 O
ATOM 6 C5' G A1075 35.012 -9.478 39.247 1.00 42.54 C
ATOM 7 C4' G A1075 35.535 -9.466 40.636 1.00 42.28 C
ATOM 8 O4' G A1075 36.376 -8.300 40.779 1.00 42.21 O
ATOM 9 C3' G A1075 34.471 -9.343 41.718 1.00 42.17 C
ATOM 10 O3' G A1075 34.992 -9.818 42.969 1.00 41.95 O
ATOM 11 C2' G A1075 34.353 -7.845 41.817 1.00 42.15 C
ATOM 12 O2' G A1075 33.774 -7.396 43.005 1.00 42.00 O
ATOM 13 C1' G A1075 35.823 -7.454 41.748 1.00 42.09 C
ATOM 14 N9 G A1075 36.058 -6.084 41.328 1.00 42.15 N
ATOM 15 C8 G A1075 35.393 -5.496 40.303 1.00 42.35 C
ATOM 16 N7 G A1075 35.761 -4.279 40.095 1.00 42.39 N
ATOM 17 C5 G A1075 36.726 -4.068 41.042 1.00 42.19 C
ATOM 18 C6 G A1075 37.447 -2.908 41.260 1.00 42.16 C
ATOM 19 O6 G A1075 37.368 -1.847 40.646 1.00 42.29 O
ATOM 20 N1 G A1075 38.300 -3.037 42.305 1.00 41.96 N
ATOM 21 C2 G A1075 38.457 -4.150 43.040 1.00 41.82 C
ATOM 22 N2 G A1075 39.381 -3.977 43.986 1.00 41.66 N
ATOM 23 N3 G A1075 37.789 -5.278 42.868 1.00 41.85 N
ATOM 24 C4 G A1075 36.932 -5.154 41.834 1.00 42.04 C
ATOM 25 P C A1076 34.904 -11.371 43.416 1.00 40.23 P
ATOM 26 OP1 C A1076 35.428 -11.445 44.780 1.00 40.01 O
ATOM 27 OP2 C A1076 35.565 -12.175 42.369 1.00 40.37 O
ATOM 28 O5' C A1076 33.341 -11.675 43.428 1.00 40.32 O
TER
ATOM 1 O3' G B2178 44.331 -2.604 44.538 1.00 36.09 O
ATOM 2 P A B2179 42.957 -3.311 44.947 1.00 33.81 P
ATOM 3 OP1 A B2179 43.195 -4.755 44.953 1.00 33.78 O
ATOM 4 OP2 A B2179 41.891 -2.780 44.079 1.00 33.96 O
ATOM 5 O5' A B2179 42.725 -2.813 46.391 1.00 33.65 O
ATOM 6 C5' A B2179 41.555 -3.201 47.047 1.00 33.59 C
ATOM 7 C4' A B2179 41.480 -2.611 48.411 1.00 33.45 C
ATOM 8 O4' A B2179 42.287 -3.384 49.315 1.00 33.32 O
ATOM 9 C3' A B2179 41.934 -1.167 48.535 1.00 33.49 C
ATOM 10 O3' A B2179 40.778 -0.336 48.631 1.00 33.54 O
ATOM 11 C2' A B2179 42.714 -1.136 49.867 1.00 33.34 C
ATOM 12 O2' A B2179 42.141 -0.263 50.799 1.00 33.30 O
ATOM 13 C1' A B2179 42.651 -2.588 50.390 1.00 33.24 C
ATOM 14 N9 A B2179 43.911 -3.142 50.918 1.00 33.16 N
ATOM 15 C8 A B2179 45.158 -3.205 50.320 1.00 33.21 C
ATOM 16 N7 A B2179 46.069 -3.852 50.999 1.00 33.13 N
ATOM 17 C5 A B2179 45.403 -4.287 52.124 1.00 33.02 C
ATOM 18 C6 A B2179 45.813 -5.021 53.272 1.00 32.92 C
ATOM 19 N6 A B2179 47.042 -5.500 53.487 1.00 32.91 N
ATOM 20 N1 A B2179 44.859 -5.278 54.225 1.00 32.85 N
ATOM 21 C2 A B2179 43.638 -4.798 54.007 1.00 32.87 C
ATOM 22 N3 A B2179 43.172 -4.089 52.986 1.00 32.97 N
ATOM 23 C4 A B2179 44.086 -3.867 52.072 1.00 33.04 C
ATOM 24 P A B2180 40.727 1.152 47.999 1.00 36.05 P
ATOM 25 OP1 A B2180 42.039 1.836 48.245 1.00 36.04 O
ATOM 26 OP2 A B2180 39.484 1.791 48.533 1.00 36.07 O
ATOM 27 O5' A B2180 40.619 0.932 46.450 1.00 36.22 O
TER
ATOM 2 P G A1075 33.129 -10.976 38.281 1.00 42.85 P
ATOM 3 OP1 G A1075 33.064 -10.334 36.910 1.00 43.09 O
ATOM 4 OP2 G A1075 32.743 -12.404 38.450 1.00 42.88 O
ATOM 5 O5' G A1075 34.571 -10.759 38.888 1.00 42.65 O
ATOM 6 C5' G A1075 35.012 -9.478 39.247 1.00 42.54 C
ATOM 7 C4' G A1075 35.535 -9.466 40.636 1.00 42.28 C
ATOM 8 O4' G A1075 36.376 -8.300 40.779 1.00 42.21 O
ATOM 9 C3' G A1075 34.471 -9.343 41.718 1.00 42.17 C
ATOM 10 O3' G A1075 34.992 -9.818 42.969 1.00 41.95 O
ATOM 11 C2' G A1075 34.353 -7.845 41.817 1.00 42.15 C
ATOM 12 O2' G A1075 33.774 -7.396 43.005 1.00 42.00 O
ATOM 13 C1' G A1075 35.823 -7.454 41.748 1.00 42.09 C
ATOM 14 N9 G A1075 36.058 -6.084 41.328 1.00 42.15 N
ATOM 15 C8 G A1075 35.393 -5.496 40.303 1.00 42.35 C
ATOM 16 N7 G A1075 35.761 -4.279 40.095 1.00 42.39 N
ATOM 17 C5 G A1075 36.726 -4.068 41.042 1.00 42.19 C
ATOM 18 C6 G A1075 37.447 -2.908 41.260 1.00 42.16 C
ATOM 19 O6 G A1075 37.368 -1.847 40.646 1.00 42.29 O
ATOM 20 N1 G A1075 38.300 -3.037 42.305 1.00 41.96 N
ATOM 21 C2 G A1075 38.457 -4.150 43.040 1.00 41.82 C
ATOM 22 N2 G A1075 39.381 -3.977 43.986 1.00 41.66 N
ATOM 23 N3 G A1075 37.789 -5.278 42.868 1.00 41.85 N
ATOM 24 C4 G A1075 36.932 -5.154 41.834 1.00 42.04 C
ATOM 25 P C A1076 34.904 -11.371 43.416 1.00 40.23 P
ATOM 26 OP1 C A1076 35.428 -11.445 44.780 1.00 40.01 O
ATOM 27 OP2 C A1076 35.565 -12.175 42.369 1.00 40.37 O
ATOM 28 O5' C A1076 33.341 -11.675 43.428 1.00 40.32 O
TER
ATOM 1 O3' G B2178 44.331 -2.604 44.538 1.00 36.09 O
ATOM 2 P A B2179 42.957 -3.311 44.947 1.00 33.81 P
ATOM 3 OP1 A B2179 43.195 -4.755 44.953 1.00 33.78 O
ATOM 4 OP2 A B2179 41.891 -2.780 44.079 1.00 33.96 O
ATOM 5 O5' A B2179 42.725 -2.813 46.391 1.00 33.65 O
ATOM 6 C5' A B2179 41.555 -3.201 47.047 1.00 33.59 C
ATOM 7 C4' A B2179 41.480 -2.611 48.411 1.00 33.45 C
ATOM 8 O4' A B2179 42.287 -3.384 49.315 1.00 33.32 O
ATOM 9 C3' A B2179 41.934 -1.167 48.535 1.00 33.49 C
ATOM 10 O3' A B2179 40.778 -0.336 48.631 1.00 33.54 O
ATOM 11 C2' A B2179 42.714 -1.136 49.867 1.00 33.34 C
ATOM 12 O2' A B2179 42.141 -0.263 50.799 1.00 33.30 O
ATOM 13 C1' A B2179 42.651 -2.588 50.390 1.00 33.24 C
ATOM 14 N9 A B2179 43.911 -3.142 50.918 1.00 33.16 N
ATOM 15 C8 A B2179 45.158 -3.205 50.320 1.00 33.21 C
ATOM 16 N7 A B2179 46.069 -3.852 50.999 1.00 33.13 N
ATOM 17 C5 A B2179 45.403 -4.287 52.124 1.00 33.02 C
ATOM 18 C6 A B2179 45.813 -5.021 53.272 1.00 32.92 C
ATOM 19 N6 A B2179 47.042 -5.500 53.487 1.00 32.91 N
ATOM 20 N1 A B2179 44.859 -5.278 54.225 1.00 32.85 N
ATOM 21 C2 A B2179 43.638 -4.798 54.007 1.00 32.87 C
ATOM 22 N3 A B2179 43.172 -4.089 52.986 1.00 32.97 N
ATOM 23 C4 A B2179 44.086 -3.867 52.072 1.00 33.04 C
ATOM 24 P A B2180 40.727 1.152 47.999 1.00 36.05 P
ATOM 25 OP1 A B2180 42.039 1.836 48.245 1.00 36.04 O
ATOM 26 OP2 A B2180 39.484 1.791 48.533 1.00 36.07 O
ATOM 27 O5' A B2180 40.619 0.932 46.450 1.00 36.22 O
TER
Atoms:
OP1: (33.064,-10.334,36.910)
OP2: (32.743,-12.404,38.450)
C3': (34.471,-9.343,41.718)
C1': (35.823,-7.454,41.748)
C5': (35.012,-9.478,39.247)
O6: (37.368,-1.847,40.646)
O4': (36.376,-8.300,40.779)
C8: (35.393,-5.496,40.303)
C2: (38.457,-4.150,43.040)
C6: (37.447,-2.908,41.260)
C5: (36.726,-4.068,41.042)
C4: (36.932,-5.154,41.834)
P: (33.129,-10.976,38.281)
C4': (35.535,-9.466,40.636)
C2': (34.353,-7.845,41.817)
O2': (33.774,-7.396,43.005)
N1: (38.300,-3.037,42.305)
N2: (39.381,-3.977,43.986)
N3: (37.789,-5.278,42.868)
N7: (35.761,-4.279,40.095)
N9: (36.058,-6.084,41.328)
O5': (34.571,-10.759,38.888)
O3': (34.992,-9.818,42.969)
OP2: (32.743,-12.404,38.450)
C3': (34.471,-9.343,41.718)
C1': (35.823,-7.454,41.748)
C5': (35.012,-9.478,39.247)
O6: (37.368,-1.847,40.646)
O4': (36.376,-8.300,40.779)
C8: (35.393,-5.496,40.303)
C2: (38.457,-4.150,43.040)
C6: (37.447,-2.908,41.260)
C5: (36.726,-4.068,41.042)
C4: (36.932,-5.154,41.834)
P: (33.129,-10.976,38.281)
C4': (35.535,-9.466,40.636)
C2': (34.353,-7.845,41.817)
O2': (33.774,-7.396,43.005)
N1: (38.300,-3.037,42.305)
N2: (39.381,-3.977,43.986)
N3: (37.789,-5.278,42.868)
N7: (35.761,-4.279,40.095)
N9: (36.058,-6.084,41.328)
O5': (34.571,-10.759,38.888)
O3': (34.992,-9.818,42.969)
OP1: (43.195,-4.755,44.953)
OP2: (41.891,-2.780,44.079)
C3': (41.934,-1.167,48.535)
C1': (42.651,-2.588,50.390)
C5': (41.555,-3.201,47.047)
O4': (42.287,-3.384,49.315)
C8: (45.158,-3.205,50.320)
O2': (42.141,-0.263,50.799)
C6: (45.813,-5.021,53.272)
C5: (45.403,-4.287,52.124)
C4: (44.086,-3.867,52.072)
P: (42.957,-3.311,44.947)
C4': (41.480,-2.611,48.411)
C2': (42.714,-1.136,49.867)
C2: (43.638,-4.798,54.007)
N1: (44.859,-5.278,54.225)
N3: (43.172,-4.089,52.986)
N6: (47.042,-5.500,53.487)
N7: (46.069,-3.852,50.999)
N9: (43.911,-3.142,50.918)
O5': (42.725,-2.813,46.391)
O3': (40.778,-0.336,48.631)
OP2: (41.891,-2.780,44.079)
C3': (41.934,-1.167,48.535)
C1': (42.651,-2.588,50.390)
C5': (41.555,-3.201,47.047)
O4': (42.287,-3.384,49.315)
C8: (45.158,-3.205,50.320)
O2': (42.141,-0.263,50.799)
C6: (45.813,-5.021,53.272)
C5: (45.403,-4.287,52.124)
C4: (44.086,-3.867,52.072)
P: (42.957,-3.311,44.947)
C4': (41.480,-2.611,48.411)
C2': (42.714,-1.136,49.867)
C2: (43.638,-4.798,54.007)
N1: (44.859,-5.278,54.225)
N3: (43.172,-4.089,52.986)
N6: (47.042,-5.500,53.487)
N7: (46.069,-3.852,50.999)
N9: (43.911,-3.142,50.918)
O5': (42.725,-2.813,46.391)
O3': (40.778,-0.336,48.631)
Image (generated by PyMOL):