ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1KD1:A369:A395

Extra

PDB:
ATOM 1 O3' A A 368 94.760 105.933 21.553 1.00 54.61 O
ATOM 2 P G A 369 94.064 107.274 22.128 1.00 54.25 P
ATOM 3 OP1 G A 369 92.634 106.907 22.335 1.00 54.54 O
ATOM 4 OP2 G A 369 94.409 108.428 21.259 1.00 53.23 O
ATOM 5 O5' G A 369 94.652 107.496 23.595 1.00 55.38 O
ATOM 6 C5' G A 369 95.863 106.894 24.007 1.00 59.21 C
ATOM 7 C4' G A 369 95.604 105.528 24.600 1.00 61.49 C
ATOM 8 O4' G A 369 96.845 104.791 24.509 1.00 63.68 O
ATOM 9 C3' G A 369 95.166 105.415 26.063 1.00 61.65 C
ATOM 10 O3' G A 369 94.460 104.165 26.169 1.00 61.06 O
ATOM 11 C2' G A 369 96.506 105.280 26.781 1.00 62.86 C
ATOM 12 O2' G A 369 96.386 104.672 28.065 1.00 63.37 O
ATOM 13 C1' G A 369 97.240 104.375 25.793 1.00 64.08 C
ATOM 14 N9 G A 369 98.697 104.283 25.821 1.00 65.82 N
ATOM 15 C8 G A 369 99.624 105.209 26.240 1.00 66.89 C
ATOM 16 N7 G A 369 100.853 104.759 26.194 1.00 67.61 N
ATOM 17 C5 G A 369 100.728 103.467 25.703 1.00 67.73 C
ATOM 18 C6 G A 369 101.712 102.464 25.472 1.00 67.79 C
ATOM 19 O6 G A 369 102.933 102.512 25.682 1.00 68.06 O
ATOM 20 N1 G A 369 101.141 101.299 24.965 1.00 67.82 N
ATOM 21 C2 G A 369 99.792 101.114 24.726 1.00 67.65 C
ATOM 22 N2 G A 369 99.419 99.924 24.263 1.00 66.23 N
ATOM 23 N3 G A 369 98.874 102.033 24.941 1.00 67.64 N
ATOM 24 C4 G A 369 99.407 103.173 25.436 1.00 67.33 C
ATOM 25 P U A 370 93.533 103.836 27.450 1.00 59.14 P
ATOM 26 OP1 U A 370 93.112 105.146 28.007 1.00 61.58 O
ATOM 27 OP2 U A 370 94.210 102.841 28.327 1.00 57.16 O
ATOM 28 O5' U A 370 92.242 103.183 26.791 1.00 57.62 O
TER

ATOM 1 O3' G B 394 101.491 95.644 24.719 1.00 68.67 O
ATOM 2 P A B 395 101.649 96.311 23.245 1.00 68.78 P
ATOM 3 OP1 A B 395 102.930 95.787 22.695 1.00 69.59 O
ATOM 4 OP2 A B 395 101.403 97.772 23.241 1.00 69.87 O
ATOM 5 O5' A B 395 100.478 95.639 22.409 1.00 69.34 O
ATOM 6 C5' A B 395 100.371 94.217 22.379 1.00 69.94 C
ATOM 7 C4' A B 395 99.079 93.769 21.727 1.00 68.37 C
ATOM 8 O4' A B 395 97.866 94.258 22.372 1.00 66.68 O
ATOM 9 C3' A B 395 98.780 94.200 20.312 1.00 67.84 C
ATOM 10 O3' A B 395 99.713 93.672 19.362 1.00 69.04 O
ATOM 11 C2' A B 395 97.387 93.588 20.164 1.00 66.92 C
ATOM 12 O2' A B 395 97.474 92.181 20.029 1.00 66.59 O
ATOM 13 C1' A B 395 96.770 93.886 21.542 1.00 65.40 C
ATOM 14 N9 A B 395 95.746 94.946 21.488 1.00 63.02 N
ATOM 15 C8 A B 395 95.806 96.266 21.873 1.00 62.00 C
ATOM 16 N7 A B 395 94.725 96.958 21.575 1.00 60.65 N
ATOM 17 C5 A B 395 93.889 96.031 20.960 1.00 61.06 C
ATOM 18 C6 A B 395 92.598 96.133 20.358 1.00 60.66 C
ATOM 19 N6 A B 395 91.928 97.277 20.187 1.00 59.33 N
ATOM 20 N1 A B 395 92.032 94.994 19.893 1.00 60.94 N
ATOM 21 C2 A B 395 92.727 93.848 19.979 1.00 61.79 C
ATOM 22 N3 A B 395 93.950 93.634 20.465 1.00 61.90 N
ATOM 23 C4 A B 395 94.485 94.777 20.945 1.00 62.26 C
ATOM 24 P A B 396 99.716 94.235 17.850 1.00 69.46 P
ATOM 25 OP1 A B 396 100.957 93.716 17.203 1.00 69.22 O
ATOM 26 OP2 A B 396 99.472 95.699 17.866 1.00 67.77 O
ATOM 27 O5' A B 396 98.451 93.504 17.199 1.00 68.41 O
TER

Atoms:
OP1: (92.634,106.907,22.335)
OP2: (94.409,108.428,21.259)
C3': (95.166,105.415,26.063)
C1': (97.240,104.375,25.793)
C5': (95.863,106.894,24.007)
O6: (102.933,102.512,25.682)
O4': (96.845,104.791,24.509)
C8: (99.624,105.209,26.240)
C2: (99.792,101.114,24.726)
C6: (101.712,102.464,25.472)
C5: (100.728,103.467,25.703)
C4: (99.407,103.173,25.436)
P: (94.064,107.274,22.128)
C4': (95.604,105.528,24.600)
C2': (96.506,105.280,26.781)
O2': (96.386,104.672,28.065)
N1: (101.141,101.299,24.965)
N2: (99.419,99.924,24.263)
N3: (98.874,102.033,24.941)
N7: (100.853,104.759,26.194)
N9: (98.697,104.283,25.821)
O5': (94.652,107.496,23.595)
O3': (94.460,104.165,26.169)
OP1: (102.930,95.787,22.695)
OP2: (101.403,97.772,23.241)
C3': (98.780,94.200,20.312)
C1': (96.770,93.886,21.542)
C5': (100.371,94.217,22.379)
O4': (97.866,94.258,22.372)
C8: (95.806,96.266,21.873)
O2': (97.474,92.181,20.029)
C6: (92.598,96.133,20.358)
C5: (93.889,96.031,20.960)
C4: (94.485,94.777,20.945)
P: (101.649,96.311,23.245)
C4': (99.079,93.769,21.727)
C2': (97.387,93.588,20.164)
C2: (92.727,93.848,19.979)
N1: (92.032,94.994,19.893)
N3: (93.950,93.634,20.465)
N6: (91.928,97.277,20.187)
N7: (94.725,96.958,21.575)
N9: (95.746,94.946,21.488)
O5': (100.478,95.639,22.409)
O3': (99.713,93.672,19.362)
Image (generated by PyMOL):
PyMOL image
show in jmol