ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQM:01173:01111

Extra

PDB:
ATOM 1 O3' C A1172 31.476 89.169 178.005 1.00 83.37 O
ATOM 2 P G A1173 30.054 88.428 177.869 1.00 86.19 P
ATOM 3 OP1 G A1173 28.997 89.471 177.953 1.00 84.65 O
ATOM 4 OP2 G A1173 30.021 87.269 178.798 1.00 86.37 O
ATOM 5 O5' G A1173 30.053 87.863 176.383 1.00 85.35 O
ATOM 6 C5' G A1173 30.668 88.602 175.315 1.00 85.66 C
ATOM 7 C4' G A1173 31.068 87.663 174.207 1.00 85.53 C
ATOM 8 O4' G A1173 32.034 86.711 174.730 1.00 84.70 O
ATOM 9 C3' G A1173 29.927 86.834 173.634 1.00 85.54 C
ATOM 10 O3' G A1173 30.164 86.589 172.261 1.00 86.49 O
ATOM 11 C2' G A1173 30.004 85.545 174.444 1.00 84.76 C
ATOM 12 O2' G A1173 29.460 84.426 173.772 1.00 84.08 O
ATOM 13 C1' G A1173 31.512 85.399 174.649 1.00 84.16 C
ATOM 14 N9 G A1173 31.865 84.704 175.885 1.00 83.35 N
ATOM 15 C8 G A1173 31.220 84.790 177.099 1.00 83.12 C
ATOM 16 N7 G A1173 31.762 84.043 178.021 1.00 83.18 N
ATOM 17 C5 G A1173 32.832 83.429 177.381 1.00 82.30 C
ATOM 18 C6 G A1173 33.785 82.502 177.872 1.00 81.02 C
ATOM 19 O6 G A1173 33.876 82.020 179.004 1.00 80.96 O
ATOM 20 N1 G A1173 34.695 82.137 176.889 1.00 80.22 N
ATOM 21 C2 G A1173 34.692 82.600 175.599 1.00 80.74 C
ATOM 22 N2 G A1173 35.662 82.130 174.802 1.00 80.93 N
ATOM 23 N3 G A1173 33.807 83.459 175.125 1.00 81.15 N
ATOM 24 C4 G A1173 32.912 83.830 176.064 1.00 82.07 C
ATOM 25 P A A1174 29.122 87.134 171.173 1.00 88.05 P
ATOM 26 OP1 A A1174 29.526 88.524 170.839 1.00 87.44 O
ATOM 27 OP2 A A1174 27.743 86.868 171.660 1.00 88.85 O
ATOM 28 O5' A A1174 29.392 86.206 169.910 1.00 88.06 O
TER

ATOM 1 O3' G B1110 37.708 79.160 174.949 1.00 82.52 O
ATOM 2 P A B1111 39.142 79.841 175.197 1.00 83.96 P
ATOM 3 OP1 A B1111 39.821 79.144 176.322 1.00 85.33 O
ATOM 4 OP2 A B1111 38.929 81.309 175.270 1.00 84.54 O
ATOM 5 O5' A B1111 39.949 79.509 173.864 1.00 84.15 O
ATOM 6 C5' A B1111 40.213 78.146 173.474 1.00 84.37 C
ATOM 7 C4' A B1111 39.922 77.962 172.002 1.00 84.76 C
ATOM 8 O4' A B1111 38.502 78.139 171.765 1.00 84.79 O
ATOM 9 C3' A B1111 40.583 78.981 171.093 1.00 85.21 C
ATOM 10 O3' A B1111 41.912 78.601 170.783 1.00 86.72 O
ATOM 11 C2' A B1111 39.669 78.980 169.878 1.00 84.78 C
ATOM 12 O2' A B1111 39.890 77.871 169.029 1.00 84.80 O
ATOM 13 C1' A B1111 38.301 78.829 170.543 1.00 84.15 C
ATOM 14 N9 A B1111 37.638 80.097 170.847 1.00 83.55 N
ATOM 15 C8 A B1111 37.375 80.625 172.088 1.00 83.23 C
ATOM 16 N7 A B1111 36.729 81.761 172.054 1.00 83.21 N
ATOM 17 C5 A B1111 36.562 82.009 170.700 1.00 83.39 C
ATOM 18 C6 A B1111 35.946 83.060 170.003 1.00 82.85 C
ATOM 19 N6 A B1111 35.352 84.095 170.599 1.00 82.05 N
ATOM 20 N1 A B1111 35.959 83.010 168.655 1.00 83.26 N
ATOM 21 C2 A B1111 36.548 81.968 168.057 1.00 83.52 C
ATOM 22 N3 A B1111 37.155 80.917 168.602 1.00 84.01 N
ATOM 23 C4 A B1111 37.127 80.998 169.944 1.00 83.83 C
ATOM 24 P C B1112 43.104 79.653 170.993 1.00 89.88 P
ATOM 25 OP1 C B1112 44.349 78.978 170.525 1.00 88.56 O
ATOM 26 OP2 C B1112 43.031 80.197 172.382 1.00 87.75 O
ATOM 27 O5' C B1112 42.757 80.837 169.982 1.00 88.97 O
TER

Atoms:
OP1: (28.997,89.471,177.953)
OP2: (30.021,87.269,178.798)
C3': (29.927,86.834,173.634)
C1': (31.512,85.399,174.649)
C5': (30.668,88.602,175.315)
O6: (33.876,82.020,179.004)
O4': (32.034,86.711,174.730)
C8: (31.220,84.790,177.099)
C2: (34.692,82.600,175.599)
C6: (33.785,82.502,177.872)
C5: (32.832,83.429,177.381)
C4: (32.912,83.830,176.064)
P: (30.054,88.428,177.869)
C4': (31.068,87.663,174.207)
C2': (30.004,85.545,174.444)
O2': (29.460,84.426,173.772)
N1: (34.695,82.137,176.889)
N2: (35.662,82.130,174.802)
N3: (33.807,83.459,175.125)
N7: (31.762,84.043,178.021)
N9: (31.865,84.704,175.885)
O5': (30.053,87.863,176.383)
O3': (30.164,86.589,172.261)
OP1: (39.821,79.144,176.322)
OP2: (38.929,81.309,175.270)
C3': (40.583,78.981,171.093)
C1': (38.301,78.829,170.543)
C5': (40.213,78.146,173.474)
O4': (38.502,78.139,171.765)
C8: (37.375,80.625,172.088)
O2': (39.890,77.871,169.029)
C6: (35.946,83.060,170.003)
C5: (36.562,82.009,170.700)
C4: (37.127,80.998,169.944)
P: (39.142,79.841,175.197)
C4': (39.922,77.962,172.002)
C2': (39.669,78.980,169.878)
C2: (36.548,81.968,168.057)
N1: (35.959,83.010,168.655)
N3: (37.155,80.917,168.602)
N6: (35.352,84.095,170.599)
N7: (36.729,81.761,172.054)
N9: (37.638,80.097,170.847)
O5': (39.949,79.509,173.864)
O3': (41.912,78.601,170.783)
Image (generated by PyMOL):
PyMOL image
show in jmol