Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8O:A564:A558
Extra
PDB:
ATOM 1 O3' U A 563 -12.962 69.312 70.462 1.00 19.80 O
ATOM 2 P G A 564 -14.283 69.725 69.630 1.00 18.97 P
ATOM 3 OP1 G A 564 -15.308 68.673 69.880 1.00 18.97 O
ATOM 4 OP2 G A 564 -13.864 69.984 68.233 1.00 18.97 O
ATOM 5 O5' G A 564 -14.716 71.093 70.340 1.00 18.97 O
ATOM 6 C5' G A 564 -15.785 71.897 69.846 1.00 18.97 C
ATOM 7 C4' G A 564 -16.335 72.803 70.926 1.00 18.97 C
ATOM 8 O4' G A 564 -17.333 72.078 71.686 1.00 18.97 O
ATOM 9 C3' G A 564 -15.317 73.294 71.951 1.00 18.97 C
ATOM 10 O3' G A 564 -15.747 74.549 72.476 1.00 18.97 O
ATOM 11 C2' G A 564 -15.419 72.235 73.040 1.00 18.97 C
ATOM 12 O2' G A 564 -14.969 72.649 74.306 1.00 18.97 O
ATOM 13 C1' G A 564 -16.919 71.959 73.042 1.00 18.97 C
ATOM 14 N9 G A 564 -17.285 70.620 73.506 1.00 18.92 N
ATOM 15 C8 G A 564 -16.821 69.484 72.915 1.00 18.92 C
ATOM 16 N7 G A 564 -17.285 68.396 73.446 1.00 18.92 N
ATOM 17 C5 G A 564 -18.119 68.839 74.451 1.00 18.92 C
ATOM 18 C6 G A 564 -18.901 68.081 75.364 1.00 18.92 C
ATOM 19 O6 G A 564 -19.005 66.867 75.452 1.00 18.92 O
ATOM 20 N1 G A 564 -19.626 68.857 76.244 1.00 18.92 N
ATOM 21 C2 G A 564 -19.600 70.222 76.226 1.00 18.92 C
ATOM 22 N2 G A 564 -20.393 70.768 77.173 1.00 18.92 N
ATOM 23 N3 G A 564 -18.866 70.960 75.366 1.00 18.92 N
ATOM 24 C4 G A 564 -18.143 70.213 74.506 1.00 18.92 C
ATOM 25 P G A 565 -15.288 75.928 71.785 1.00 5.94 P
ATOM 26 OP1 G A 565 -15.103 75.655 70.331 1.00 5.94 O
ATOM 27 OP2 G A 565 -14.130 76.446 72.573 1.00 5.94 O
ATOM 28 O5' G A 565 -16.547 76.875 72.006 1.00 5.94 O
TER
ATOM 1 O3' A B 557 -24.880 70.050 77.519 1.00 9.62 O
ATOM 2 P A B 558 -23.564 69.600 76.719 1.00 16.81 P
ATOM 3 OP1 A B 558 -24.012 68.854 75.532 1.00 16.81 O
ATOM 4 OP2 A B 558 -22.682 68.916 77.670 1.00 16.81 O
ATOM 5 O5' A B 558 -22.925 70.984 76.268 1.00 16.81 O
ATOM 6 C5' A B 558 -23.506 72.220 76.651 1.00 16.81 C
ATOM 7 C4' A B 558 -23.454 73.240 75.540 1.00 16.81 C
ATOM 8 O4' A B 558 -22.200 73.108 74.827 1.00 16.81 O
ATOM 9 C3' A B 558 -24.556 73.118 74.502 1.00 16.81 C
ATOM 10 O3' A B 558 -24.986 74.408 74.115 1.00 16.81 O
ATOM 11 C2' A B 558 -23.879 72.428 73.319 1.00 16.81 C
ATOM 12 O2' A B 558 -24.415 72.770 72.057 1.00 16.81 O
ATOM 13 C1' A B 558 -22.438 72.892 73.444 1.00 16.81 C
ATOM 14 N9 A B 558 -21.469 71.900 72.949 1.00 17.11 N
ATOM 15 C8 A B 558 -21.042 70.750 73.576 1.00 17.11 C
ATOM 16 N7 A B 558 -20.178 70.032 72.893 1.00 17.11 N
ATOM 17 C5 A B 558 -20.027 70.746 71.723 1.00 17.11 C
ATOM 18 C6 A B 558 -19.238 70.499 70.585 1.00 17.11 C
ATOM 19 N6 A B 558 -18.436 69.444 70.445 1.00 17.11 N
ATOM 20 N1 A B 558 -19.302 71.400 69.586 1.00 17.11 N
ATOM 21 C2 A B 558 -20.110 72.469 69.748 1.00 17.11 C
ATOM 22 N3 A B 558 -20.904 72.817 70.771 1.00 17.11 N
ATOM 23 C4 A B 558 -20.819 71.893 71.739 1.00 17.11 C
ATOM 24 P U B 559 -26.104 75.162 74.969 1.00 10.85 P
ATOM 25 OP1 U B 559 -27.392 74.435 74.791 1.00 10.85 O
ATOM 26 OP2 U B 559 -26.037 76.575 74.586 1.00 10.85 O
ATOM 27 O5' U B 559 -25.575 74.997 76.448 1.00 10.85 O
TER
ATOM 2 P G A 564 -14.283 69.725 69.630 1.00 18.97 P
ATOM 3 OP1 G A 564 -15.308 68.673 69.880 1.00 18.97 O
ATOM 4 OP2 G A 564 -13.864 69.984 68.233 1.00 18.97 O
ATOM 5 O5' G A 564 -14.716 71.093 70.340 1.00 18.97 O
ATOM 6 C5' G A 564 -15.785 71.897 69.846 1.00 18.97 C
ATOM 7 C4' G A 564 -16.335 72.803 70.926 1.00 18.97 C
ATOM 8 O4' G A 564 -17.333 72.078 71.686 1.00 18.97 O
ATOM 9 C3' G A 564 -15.317 73.294 71.951 1.00 18.97 C
ATOM 10 O3' G A 564 -15.747 74.549 72.476 1.00 18.97 O
ATOM 11 C2' G A 564 -15.419 72.235 73.040 1.00 18.97 C
ATOM 12 O2' G A 564 -14.969 72.649 74.306 1.00 18.97 O
ATOM 13 C1' G A 564 -16.919 71.959 73.042 1.00 18.97 C
ATOM 14 N9 G A 564 -17.285 70.620 73.506 1.00 18.92 N
ATOM 15 C8 G A 564 -16.821 69.484 72.915 1.00 18.92 C
ATOM 16 N7 G A 564 -17.285 68.396 73.446 1.00 18.92 N
ATOM 17 C5 G A 564 -18.119 68.839 74.451 1.00 18.92 C
ATOM 18 C6 G A 564 -18.901 68.081 75.364 1.00 18.92 C
ATOM 19 O6 G A 564 -19.005 66.867 75.452 1.00 18.92 O
ATOM 20 N1 G A 564 -19.626 68.857 76.244 1.00 18.92 N
ATOM 21 C2 G A 564 -19.600 70.222 76.226 1.00 18.92 C
ATOM 22 N2 G A 564 -20.393 70.768 77.173 1.00 18.92 N
ATOM 23 N3 G A 564 -18.866 70.960 75.366 1.00 18.92 N
ATOM 24 C4 G A 564 -18.143 70.213 74.506 1.00 18.92 C
ATOM 25 P G A 565 -15.288 75.928 71.785 1.00 5.94 P
ATOM 26 OP1 G A 565 -15.103 75.655 70.331 1.00 5.94 O
ATOM 27 OP2 G A 565 -14.130 76.446 72.573 1.00 5.94 O
ATOM 28 O5' G A 565 -16.547 76.875 72.006 1.00 5.94 O
TER
ATOM 1 O3' A B 557 -24.880 70.050 77.519 1.00 9.62 O
ATOM 2 P A B 558 -23.564 69.600 76.719 1.00 16.81 P
ATOM 3 OP1 A B 558 -24.012 68.854 75.532 1.00 16.81 O
ATOM 4 OP2 A B 558 -22.682 68.916 77.670 1.00 16.81 O
ATOM 5 O5' A B 558 -22.925 70.984 76.268 1.00 16.81 O
ATOM 6 C5' A B 558 -23.506 72.220 76.651 1.00 16.81 C
ATOM 7 C4' A B 558 -23.454 73.240 75.540 1.00 16.81 C
ATOM 8 O4' A B 558 -22.200 73.108 74.827 1.00 16.81 O
ATOM 9 C3' A B 558 -24.556 73.118 74.502 1.00 16.81 C
ATOM 10 O3' A B 558 -24.986 74.408 74.115 1.00 16.81 O
ATOM 11 C2' A B 558 -23.879 72.428 73.319 1.00 16.81 C
ATOM 12 O2' A B 558 -24.415 72.770 72.057 1.00 16.81 O
ATOM 13 C1' A B 558 -22.438 72.892 73.444 1.00 16.81 C
ATOM 14 N9 A B 558 -21.469 71.900 72.949 1.00 17.11 N
ATOM 15 C8 A B 558 -21.042 70.750 73.576 1.00 17.11 C
ATOM 16 N7 A B 558 -20.178 70.032 72.893 1.00 17.11 N
ATOM 17 C5 A B 558 -20.027 70.746 71.723 1.00 17.11 C
ATOM 18 C6 A B 558 -19.238 70.499 70.585 1.00 17.11 C
ATOM 19 N6 A B 558 -18.436 69.444 70.445 1.00 17.11 N
ATOM 20 N1 A B 558 -19.302 71.400 69.586 1.00 17.11 N
ATOM 21 C2 A B 558 -20.110 72.469 69.748 1.00 17.11 C
ATOM 22 N3 A B 558 -20.904 72.817 70.771 1.00 17.11 N
ATOM 23 C4 A B 558 -20.819 71.893 71.739 1.00 17.11 C
ATOM 24 P U B 559 -26.104 75.162 74.969 1.00 10.85 P
ATOM 25 OP1 U B 559 -27.392 74.435 74.791 1.00 10.85 O
ATOM 26 OP2 U B 559 -26.037 76.575 74.586 1.00 10.85 O
ATOM 27 O5' U B 559 -25.575 74.997 76.448 1.00 10.85 O
TER
Atoms:
OP1: (-15.308,68.673,69.880)
OP2: (-13.864,69.984,68.233)
C3': (-15.317,73.294,71.951)
C1': (-16.919,71.959,73.042)
C5': (-15.785,71.897,69.846)
O6: (-19.005,66.867,75.452)
O4': (-17.333,72.078,71.686)
C8: (-16.821,69.484,72.915)
C2: (-19.600,70.222,76.226)
C6: (-18.901,68.081,75.364)
C5: (-18.119,68.839,74.451)
C4: (-18.143,70.213,74.506)
P: (-14.283,69.725,69.630)
C4': (-16.335,72.803,70.926)
C2': (-15.419,72.235,73.040)
O2': (-14.969,72.649,74.306)
N1: (-19.626,68.857,76.244)
N2: (-20.393,70.768,77.173)
N3: (-18.866,70.960,75.366)
N7: (-17.285,68.396,73.446)
N9: (-17.285,70.620,73.506)
O5': (-14.716,71.093,70.340)
O3': (-15.747,74.549,72.476)
OP2: (-13.864,69.984,68.233)
C3': (-15.317,73.294,71.951)
C1': (-16.919,71.959,73.042)
C5': (-15.785,71.897,69.846)
O6: (-19.005,66.867,75.452)
O4': (-17.333,72.078,71.686)
C8: (-16.821,69.484,72.915)
C2: (-19.600,70.222,76.226)
C6: (-18.901,68.081,75.364)
C5: (-18.119,68.839,74.451)
C4: (-18.143,70.213,74.506)
P: (-14.283,69.725,69.630)
C4': (-16.335,72.803,70.926)
C2': (-15.419,72.235,73.040)
O2': (-14.969,72.649,74.306)
N1: (-19.626,68.857,76.244)
N2: (-20.393,70.768,77.173)
N3: (-18.866,70.960,75.366)
N7: (-17.285,68.396,73.446)
N9: (-17.285,70.620,73.506)
O5': (-14.716,71.093,70.340)
O3': (-15.747,74.549,72.476)
OP1: (-24.012,68.854,75.532)
OP2: (-22.682,68.916,77.670)
C3': (-24.556,73.118,74.502)
C1': (-22.438,72.892,73.444)
C5': (-23.506,72.220,76.651)
O4': (-22.200,73.108,74.827)
C8: (-21.042,70.750,73.576)
O2': (-24.415,72.770,72.057)
C6: (-19.238,70.499,70.585)
C5: (-20.027,70.746,71.723)
C4: (-20.819,71.893,71.739)
P: (-23.564,69.600,76.719)
C4': (-23.454,73.240,75.540)
C2': (-23.879,72.428,73.319)
C2: (-20.110,72.469,69.748)
N1: (-19.302,71.400,69.586)
N3: (-20.904,72.817,70.771)
N6: (-18.436,69.444,70.445)
N7: (-20.178,70.032,72.893)
N9: (-21.469,71.900,72.949)
O5': (-22.925,70.984,76.268)
O3': (-24.986,74.408,74.115)
OP2: (-22.682,68.916,77.670)
C3': (-24.556,73.118,74.502)
C1': (-22.438,72.892,73.444)
C5': (-23.506,72.220,76.651)
O4': (-22.200,73.108,74.827)
C8: (-21.042,70.750,73.576)
O2': (-24.415,72.770,72.057)
C6: (-19.238,70.499,70.585)
C5: (-20.027,70.746,71.723)
C4: (-20.819,71.893,71.739)
P: (-23.564,69.600,76.719)
C4': (-23.454,73.240,75.540)
C2': (-23.879,72.428,73.319)
C2: (-20.110,72.469,69.748)
N1: (-19.302,71.400,69.586)
N3: (-20.904,72.817,70.771)
N6: (-18.436,69.444,70.445)
N7: (-20.178,70.032,72.893)
N9: (-21.469,71.900,72.949)
O5': (-22.925,70.984,76.268)
O3': (-24.986,74.408,74.115)
Image (generated by PyMOL):