ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQK:01348:01351

Extra

PDB:
ATOM 1 O3' U A1347 45.894 186.926 75.091 1.00 46.75 O
ATOM 2 P G A1348 44.296 187.019 75.138 1.00 48.88 P
ATOM 3 OP1 G A1348 43.880 187.383 73.752 1.00 46.33 O
ATOM 4 OP2 G A1348 43.889 187.870 76.283 1.00 46.61 O
ATOM 5 O5' G A1348 43.825 185.526 75.450 1.00 49.89 O
ATOM 6 C5' G A1348 44.019 184.474 74.482 1.00 49.39 C
ATOM 7 C4' G A1348 43.793 183.122 75.119 1.00 48.54 C
ATOM 8 O4' G A1348 44.774 182.884 76.162 1.00 48.29 O
ATOM 9 C3' G A1348 42.462 182.950 75.821 1.00 48.62 C
ATOM 10 O3' G A1348 41.448 182.640 74.879 1.00 49.74 O
ATOM 11 C2' G A1348 42.756 181.801 76.774 1.00 47.97 C
ATOM 12 O2' G A1348 42.754 180.551 76.119 1.00 48.71 O
ATOM 13 C1' G A1348 44.182 182.144 77.217 1.00 46.60 C
ATOM 14 N9 G A1348 44.182 182.983 78.409 1.00 47.08 N
ATOM 15 C8 G A1348 44.116 184.354 78.443 1.00 46.01 C
ATOM 16 N7 G A1348 44.049 184.832 79.652 1.00 47.11 N
ATOM 17 C5 G A1348 44.088 183.712 80.470 1.00 46.37 C
ATOM 18 C6 G A1348 44.030 183.609 81.877 1.00 46.52 C
ATOM 19 O6 G A1348 43.902 184.510 82.709 1.00 50.06 O
ATOM 20 N1 G A1348 44.130 182.293 82.298 1.00 47.32 N
ATOM 21 C2 G A1348 44.265 181.212 81.472 1.00 48.02 C
ATOM 22 N2 G A1348 44.384 180.021 82.086 1.00 46.06 N
ATOM 23 N3 G A1348 44.293 181.290 80.149 1.00 47.52 N
ATOM 24 C4 G A1348 44.201 182.564 79.721 1.00 46.22 C
ATOM 25 P A A1349 39.966 183.223 75.075 1.00 50.80 P
ATOM 26 OP1 A A1349 39.272 182.979 73.788 1.00 50.52 O
ATOM 27 OP2 A A1349 40.049 184.613 75.624 1.00 49.43 O
ATOM 28 O5' A A1349 39.332 182.290 76.200 1.00 51.86 O
TER

ATOM 1 O3' G B1350 41.557 178.388 84.280 1.00 48.99 O
ATOM 2 P A B1351 42.647 179.269 85.069 1.00 49.43 P
ATOM 3 OP1 A B1351 42.465 178.939 86.505 1.00 51.13 O
ATOM 4 OP2 A B1351 42.556 180.689 84.621 1.00 51.56 O
ATOM 5 O5' A B1351 44.062 178.686 84.619 1.00 49.94 O
ATOM 6 C5' A B1351 44.363 177.294 84.772 1.00 47.39 C
ATOM 7 C4' A B1351 45.855 177.077 84.846 1.00 45.92 C
ATOM 8 O4' A B1351 46.447 177.450 83.571 1.00 45.10 O
ATOM 9 C3' A B1351 46.610 177.877 85.912 1.00 44.75 C
ATOM 10 O3' A B1351 47.583 177.038 86.527 1.00 46.08 O
ATOM 11 C2' A B1351 47.325 178.947 85.085 1.00 44.41 C
ATOM 12 O2' A B1351 48.535 179.390 85.659 1.00 43.68 O
ATOM 13 C1' A B1351 47.634 178.171 83.812 1.00 44.35 C
ATOM 14 N9 A B1351 47.963 178.961 82.623 1.00 43.37 N
ATOM 15 C8 A B1351 47.631 180.261 82.334 1.00 43.75 C
ATOM 16 N7 A B1351 48.058 180.665 81.162 1.00 44.45 N
ATOM 17 C5 A B1351 48.719 179.561 80.646 1.00 42.71 C
ATOM 18 C6 A B1351 49.384 179.337 79.429 1.00 42.76 C
ATOM 19 N6 A B1351 49.475 180.240 78.454 1.00 41.30 N
ATOM 20 N1 A B1351 49.952 178.128 79.237 1.00 42.83 N
ATOM 21 C2 A B1351 49.839 177.212 80.195 1.00 41.34 C
ATOM 22 N3 A B1351 49.228 177.294 81.370 1.00 43.21 N
ATOM 23 C4 A B1351 48.681 178.510 81.539 1.00 43.63 C
ATOM 24 P A B1352 47.224 176.262 87.897 1.00 49.18 P
ATOM 25 OP1 A B1352 46.724 174.908 87.547 1.00 49.30 O
ATOM 26 OP2 A B1352 46.399 177.159 88.750 1.00 48.06 O
ATOM 27 O5' A B1352 48.628 176.077 88.622 1.00 47.31 O
TER

Atoms:
OP1: (43.880,187.383,73.752)
OP2: (43.889,187.870,76.283)
C3': (42.462,182.950,75.821)
C1': (44.182,182.144,77.217)
C5': (44.019,184.474,74.482)
O6: (43.902,184.510,82.709)
O4': (44.774,182.884,76.162)
C8: (44.116,184.354,78.443)
C2: (44.265,181.212,81.472)
C6: (44.030,183.609,81.877)
C5: (44.088,183.712,80.470)
C4: (44.201,182.564,79.721)
P: (44.296,187.019,75.138)
C4': (43.793,183.122,75.119)
C2': (42.756,181.801,76.774)
O2': (42.754,180.551,76.119)
N1: (44.130,182.293,82.298)
N2: (44.384,180.021,82.086)
N3: (44.293,181.290,80.149)
N7: (44.049,184.832,79.652)
N9: (44.182,182.983,78.409)
O5': (43.825,185.526,75.450)
O3': (41.448,182.640,74.879)
OP1: (42.465,178.939,86.505)
OP2: (42.556,180.689,84.621)
C3': (46.610,177.877,85.912)
C1': (47.634,178.171,83.812)
C5': (44.363,177.294,84.772)
O4': (46.447,177.450,83.571)
C8: (47.631,180.261,82.334)
O2': (48.535,179.390,85.659)
C6: (49.384,179.337,79.429)
C5: (48.719,179.561,80.646)
C4: (48.681,178.510,81.539)
P: (42.647,179.269,85.069)
C4': (45.855,177.077,84.846)
C2': (47.325,178.947,85.085)
C2: (49.839,177.212,80.195)
N1: (49.952,178.128,79.237)
N3: (49.228,177.294,81.370)
N6: (49.475,180.240,78.454)
N7: (48.058,180.665,81.162)
N9: (47.963,178.961,82.623)
O5': (44.062,178.686,84.619)
O3': (47.583,177.038,86.527)
Image (generated by PyMOL):
PyMOL image
show in jmol