ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQL:01866:01889

Extra

PDB:
ATOM 1 O3' U A1865 108.460 86.059 60.452 1.00 71.25 O
ATOM 2 P G A1866 108.106 86.215 58.893 1.00 71.72 P
ATOM 3 OP1 G A1866 106.732 85.671 58.701 1.00 71.34 O
ATOM 4 OP2 G A1866 109.232 85.678 58.081 1.00 69.79 O
ATOM 5 O5' G A1866 108.057 87.791 58.676 1.00 70.06 O
ATOM 6 C5' G A1866 106.996 88.582 59.247 1.00 67.76 C
ATOM 7 C4' G A1866 107.149 90.023 58.836 1.00 65.46 C
ATOM 8 O4' G A1866 108.368 90.553 59.419 1.00 64.97 O
ATOM 9 C3' G A1866 107.334 90.246 57.344 1.00 64.40 C
ATOM 10 O3' G A1866 106.110 90.230 56.623 1.00 62.42 O
ATOM 11 C2' G A1866 108.037 91.596 57.310 1.00 64.43 C
ATOM 12 O2' G A1866 107.167 92.697 57.487 1.00 63.96 O
ATOM 13 C1' G A1866 108.975 91.463 58.513 1.00 63.98 C
ATOM 14 N9 G A1866 110.267 90.913 58.116 1.00 63.04 N
ATOM 15 C8 G A1866 110.595 89.587 57.965 1.00 62.40 C
ATOM 16 N7 G A1866 111.816 89.407 57.548 1.00 63.01 N
ATOM 17 C5 G A1866 112.332 90.690 57.428 1.00 62.32 C
ATOM 18 C6 G A1866 113.613 91.130 57.008 1.00 62.17 C
ATOM 19 O6 G A1866 114.579 90.452 56.635 1.00 62.94 O
ATOM 20 N1 G A1866 113.710 92.517 57.040 1.00 62.14 N
ATOM 21 C2 G A1866 112.705 93.373 57.420 1.00 60.83 C
ATOM 22 N2 G A1866 112.995 94.680 57.383 1.00 60.30 N
ATOM 23 N3 G A1866 111.507 92.976 57.804 1.00 61.12 N
ATOM 24 C4 G A1866 111.391 91.631 57.786 1.00 62.44 C
ATOM 25 P A A1867 105.921 89.199 55.404 1.00 61.83 P
ATOM 26 OP1 A A1867 105.085 88.088 55.929 1.00 61.66 O
ATOM 27 OP2 A A1867 107.244 88.902 54.798 1.00 60.76 O
ATOM 28 O5' A A1867 105.061 90.011 54.335 1.00 60.66 O
TER

ATOM 1 O3' A B1888 115.590 98.580 55.568 1.00 58.09 O
ATOM 2 P A B1889 115.761 98.471 57.162 1.00 58.25 P
ATOM 3 OP1 A B1889 117.055 99.106 57.508 1.00 58.31 O
ATOM 4 OP2 A B1889 115.487 97.076 57.600 1.00 57.30 O
ATOM 5 O5' A B1889 114.588 99.381 57.733 1.00 58.71 O
ATOM 6 C5' A B1889 114.529 100.783 57.432 1.00 57.98 C
ATOM 7 C4' A B1889 113.150 101.315 57.722 1.00 58.26 C
ATOM 8 O4' A B1889 112.192 100.642 56.861 1.00 58.14 O
ATOM 9 C3' A B1889 112.623 101.041 59.121 1.00 58.76 C
ATOM 10 O3' A B1889 113.117 101.965 60.083 1.00 59.07 O
ATOM 11 C2' A B1889 111.124 101.159 58.910 1.00 58.12 C
ATOM 12 O2' A B1889 110.722 102.507 58.781 1.00 60.09 O
ATOM 13 C1' A B1889 110.968 100.463 57.556 1.00 57.46 C
ATOM 14 N9 A B1889 110.729 99.026 57.701 1.00 55.70 N
ATOM 15 C8 A B1889 111.664 98.020 57.774 1.00 54.77 C
ATOM 16 N7 A B1889 111.146 96.825 57.932 1.00 53.66 N
ATOM 17 C5 A B1889 109.778 97.056 57.958 1.00 52.83 C
ATOM 18 C6 A B1889 108.678 96.193 58.098 1.00 51.03 C
ATOM 19 N6 A B1889 108.790 94.875 58.239 1.00 49.93 N
ATOM 20 N1 A B1889 107.445 96.741 58.084 1.00 49.77 N
ATOM 21 C2 A B1889 107.335 98.071 57.935 1.00 50.56 C
ATOM 22 N3 A B1889 108.292 98.985 57.792 1.00 50.02 N
ATOM 23 C4 A B1889 109.505 98.407 57.812 1.00 53.28 C
ATOM 24 P G B1890 113.475 101.452 61.567 1.00 59.88 P
ATOM 25 OP1 G B1890 113.641 102.660 62.418 1.00 58.91 O
ATOM 26 OP2 G B1890 114.576 100.447 61.494 1.00 60.73 O
ATOM 27 O5' G B1890 112.152 100.697 62.033 1.00 59.31 O
TER

Atoms:
OP1: (106.732,85.671,58.701)
OP2: (109.232,85.678,58.081)
C3': (107.334,90.246,57.344)
C1': (108.975,91.463,58.513)
C5': (106.996,88.582,59.247)
O6: (114.579,90.452,56.635)
O4': (108.368,90.553,59.419)
C8: (110.595,89.587,57.965)
C2: (112.705,93.373,57.420)
C6: (113.613,91.130,57.008)
C5: (112.332,90.690,57.428)
C4: (111.391,91.631,57.786)
P: (108.106,86.215,58.893)
C4': (107.149,90.023,58.836)
C2': (108.037,91.596,57.310)
O2': (107.167,92.697,57.487)
N1: (113.710,92.517,57.040)
N2: (112.995,94.680,57.383)
N3: (111.507,92.976,57.804)
N7: (111.816,89.407,57.548)
N9: (110.267,90.913,58.116)
O5': (108.057,87.791,58.676)
O3': (106.110,90.230,56.623)
OP1: (117.055,99.106,57.508)
OP2: (115.487,97.076,57.600)
C3': (112.623,101.041,59.121)
C1': (110.968,100.463,57.556)
C5': (114.529,100.783,57.432)
O4': (112.192,100.642,56.861)
C8: (111.664,98.020,57.774)
O2': (110.722,102.507,58.781)
C6: (108.678,96.193,58.098)
C5: (109.778,97.056,57.958)
C4: (109.505,98.407,57.812)
P: (115.761,98.471,57.162)
C4': (113.150,101.315,57.722)
C2': (111.124,101.159,58.910)
C2: (107.335,98.071,57.935)
N1: (107.445,96.741,58.084)
N3: (108.292,98.985,57.792)
N6: (108.790,94.875,58.239)
N7: (111.146,96.825,57.932)
N9: (110.729,99.026,57.701)
O5': (114.588,99.381,57.733)
O3': (113.117,101.965,60.083)
Image (generated by PyMOL):
PyMOL image
show in jmol