Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ5:0679:0682
Extra
PDB:
ATOM 1 O3' G A 678 57.265 68.865 49.605 1.00 45.38 O
ATOM 2 P G A 679 58.375 69.937 50.037 1.00 45.62 P
ATOM 3 OP1 G A 679 58.810 69.630 51.422 1.00 47.09 O
ATOM 4 OP2 G A 679 57.839 71.284 49.719 1.00 44.01 O
ATOM 5 O5' G A 679 59.596 69.601 49.073 1.00 45.09 O
ATOM 6 C5' G A 679 60.357 68.399 49.266 1.00 45.43 C
ATOM 7 C4' G A 679 61.431 68.283 48.221 1.00 47.54 C
ATOM 8 O4' G A 679 60.823 68.120 46.916 1.00 48.45 O
ATOM 9 C3' G A 679 62.307 69.506 48.043 1.00 47.98 C
ATOM 10 O3' G A 679 63.291 69.617 49.056 1.00 49.19 O
ATOM 11 C2' G A 679 62.867 69.293 46.645 1.00 46.89 C
ATOM 12 O2' G A 679 63.918 68.353 46.576 1.00 45.93 O
ATOM 13 C1' G A 679 61.639 68.732 45.931 1.00 46.96 C
ATOM 14 N9 G A 679 60.884 69.807 45.300 1.00 47.00 N
ATOM 15 C8 G A 679 59.804 70.495 45.803 1.00 45.85 C
ATOM 16 N7 G A 679 59.398 71.453 45.014 1.00 46.45 N
ATOM 17 C5 G A 679 60.253 71.380 43.920 1.00 47.12 C
ATOM 18 C6 G A 679 60.317 72.171 42.741 1.00 46.71 C
ATOM 19 O6 G A 679 59.609 73.134 42.416 1.00 47.59 O
ATOM 20 N1 G A 679 61.338 71.745 41.900 1.00 45.87 N
ATOM 21 C2 G A 679 62.191 70.698 42.156 1.00 47.22 C
ATOM 22 N2 G A 679 63.122 70.432 41.220 1.00 48.59 N
ATOM 23 N3 G A 679 62.142 69.963 43.245 1.00 46.43 N
ATOM 24 C4 G A 679 61.160 70.357 44.077 1.00 46.41 C
ATOM 25 P A A 680 63.582 71.052 49.706 1.00 50.17 P
ATOM 26 OP1 A A 680 64.522 70.819 50.817 1.00 53.72 O
ATOM 27 OP2 A A 680 62.284 71.732 49.965 1.00 48.22 O
ATOM 28 O5' A A 680 64.333 71.848 48.545 1.00 52.30 O
TER
ATOM 1 O3' A B 681 66.384 72.739 39.682 1.00 50.21 O
ATOM 2 P A B 682 65.355 72.225 38.561 1.00 52.85 P
ATOM 3 OP1 A B 682 65.463 73.169 37.419 1.00 52.33 O
ATOM 4 OP2 A B 682 64.032 72.018 39.208 1.00 48.19 O
ATOM 5 O5' A B 682 65.946 70.804 38.120 1.00 50.59 O
ATOM 6 C5' A B 682 67.177 70.697 37.366 1.00 50.94 C
ATOM 7 C4' A B 682 67.669 69.256 37.338 1.00 53.73 C
ATOM 8 O4' A B 682 67.909 68.800 38.702 1.00 53.96 O
ATOM 9 C3' A B 682 66.719 68.210 36.758 1.00 54.60 C
ATOM 10 O3' A B 682 66.785 68.120 35.336 1.00 55.73 O
ATOM 11 C2' A B 682 67.219 66.928 37.411 1.00 54.07 C
ATOM 12 O2' A B 682 68.379 66.413 36.789 1.00 55.36 O
ATOM 13 C1' A B 682 67.564 67.424 38.818 1.00 53.36 C
ATOM 14 N9 A B 682 66.414 67.315 39.716 1.00 51.48 N
ATOM 15 C8 A B 682 65.413 68.241 39.898 1.00 51.55 C
ATOM 16 N7 A B 682 64.487 67.861 40.742 1.00 51.60 N
ATOM 17 C5 A B 682 64.907 66.603 41.152 1.00 50.27 C
ATOM 18 C6 A B 682 64.352 65.670 42.045 1.00 49.69 C
ATOM 19 N6 A B 682 63.208 65.877 42.706 1.00 49.16 N
ATOM 20 N1 A B 682 65.017 64.508 42.236 1.00 47.51 N
ATOM 21 C2 A B 682 66.164 64.313 41.568 1.00 47.63 C
ATOM 22 N3 A B 682 66.786 65.114 40.704 1.00 47.74 N
ATOM 23 C4 A B 682 66.097 66.257 40.536 1.00 49.93 C
ATOM 24 P C B 683 65.442 68.271 34.452 1.00 58.07 P
ATOM 25 OP1 C B 683 65.856 67.976 33.061 1.00 59.54 O
ATOM 26 OP2 C B 683 64.783 69.567 34.757 1.00 57.03 O
ATOM 27 O5' C B 683 64.472 67.112 34.967 1.00 59.67 O
TER
ATOM 2 P G A 679 58.375 69.937 50.037 1.00 45.62 P
ATOM 3 OP1 G A 679 58.810 69.630 51.422 1.00 47.09 O
ATOM 4 OP2 G A 679 57.839 71.284 49.719 1.00 44.01 O
ATOM 5 O5' G A 679 59.596 69.601 49.073 1.00 45.09 O
ATOM 6 C5' G A 679 60.357 68.399 49.266 1.00 45.43 C
ATOM 7 C4' G A 679 61.431 68.283 48.221 1.00 47.54 C
ATOM 8 O4' G A 679 60.823 68.120 46.916 1.00 48.45 O
ATOM 9 C3' G A 679 62.307 69.506 48.043 1.00 47.98 C
ATOM 10 O3' G A 679 63.291 69.617 49.056 1.00 49.19 O
ATOM 11 C2' G A 679 62.867 69.293 46.645 1.00 46.89 C
ATOM 12 O2' G A 679 63.918 68.353 46.576 1.00 45.93 O
ATOM 13 C1' G A 679 61.639 68.732 45.931 1.00 46.96 C
ATOM 14 N9 G A 679 60.884 69.807 45.300 1.00 47.00 N
ATOM 15 C8 G A 679 59.804 70.495 45.803 1.00 45.85 C
ATOM 16 N7 G A 679 59.398 71.453 45.014 1.00 46.45 N
ATOM 17 C5 G A 679 60.253 71.380 43.920 1.00 47.12 C
ATOM 18 C6 G A 679 60.317 72.171 42.741 1.00 46.71 C
ATOM 19 O6 G A 679 59.609 73.134 42.416 1.00 47.59 O
ATOM 20 N1 G A 679 61.338 71.745 41.900 1.00 45.87 N
ATOM 21 C2 G A 679 62.191 70.698 42.156 1.00 47.22 C
ATOM 22 N2 G A 679 63.122 70.432 41.220 1.00 48.59 N
ATOM 23 N3 G A 679 62.142 69.963 43.245 1.00 46.43 N
ATOM 24 C4 G A 679 61.160 70.357 44.077 1.00 46.41 C
ATOM 25 P A A 680 63.582 71.052 49.706 1.00 50.17 P
ATOM 26 OP1 A A 680 64.522 70.819 50.817 1.00 53.72 O
ATOM 27 OP2 A A 680 62.284 71.732 49.965 1.00 48.22 O
ATOM 28 O5' A A 680 64.333 71.848 48.545 1.00 52.30 O
TER
ATOM 1 O3' A B 681 66.384 72.739 39.682 1.00 50.21 O
ATOM 2 P A B 682 65.355 72.225 38.561 1.00 52.85 P
ATOM 3 OP1 A B 682 65.463 73.169 37.419 1.00 52.33 O
ATOM 4 OP2 A B 682 64.032 72.018 39.208 1.00 48.19 O
ATOM 5 O5' A B 682 65.946 70.804 38.120 1.00 50.59 O
ATOM 6 C5' A B 682 67.177 70.697 37.366 1.00 50.94 C
ATOM 7 C4' A B 682 67.669 69.256 37.338 1.00 53.73 C
ATOM 8 O4' A B 682 67.909 68.800 38.702 1.00 53.96 O
ATOM 9 C3' A B 682 66.719 68.210 36.758 1.00 54.60 C
ATOM 10 O3' A B 682 66.785 68.120 35.336 1.00 55.73 O
ATOM 11 C2' A B 682 67.219 66.928 37.411 1.00 54.07 C
ATOM 12 O2' A B 682 68.379 66.413 36.789 1.00 55.36 O
ATOM 13 C1' A B 682 67.564 67.424 38.818 1.00 53.36 C
ATOM 14 N9 A B 682 66.414 67.315 39.716 1.00 51.48 N
ATOM 15 C8 A B 682 65.413 68.241 39.898 1.00 51.55 C
ATOM 16 N7 A B 682 64.487 67.861 40.742 1.00 51.60 N
ATOM 17 C5 A B 682 64.907 66.603 41.152 1.00 50.27 C
ATOM 18 C6 A B 682 64.352 65.670 42.045 1.00 49.69 C
ATOM 19 N6 A B 682 63.208 65.877 42.706 1.00 49.16 N
ATOM 20 N1 A B 682 65.017 64.508 42.236 1.00 47.51 N
ATOM 21 C2 A B 682 66.164 64.313 41.568 1.00 47.63 C
ATOM 22 N3 A B 682 66.786 65.114 40.704 1.00 47.74 N
ATOM 23 C4 A B 682 66.097 66.257 40.536 1.00 49.93 C
ATOM 24 P C B 683 65.442 68.271 34.452 1.00 58.07 P
ATOM 25 OP1 C B 683 65.856 67.976 33.061 1.00 59.54 O
ATOM 26 OP2 C B 683 64.783 69.567 34.757 1.00 57.03 O
ATOM 27 O5' C B 683 64.472 67.112 34.967 1.00 59.67 O
TER
Atoms:
OP1: (58.810,69.630,51.422)
OP2: (57.839,71.284,49.719)
C3': (62.307,69.506,48.043)
C1': (61.639,68.732,45.931)
C5': (60.357,68.399,49.266)
O6: (59.609,73.134,42.416)
O4': (60.823,68.120,46.916)
C8: (59.804,70.495,45.803)
C2: (62.191,70.698,42.156)
C6: (60.317,72.171,42.741)
C5: (60.253,71.380,43.920)
C4: (61.160,70.357,44.077)
P: (58.375,69.937,50.037)
C4': (61.431,68.283,48.221)
C2': (62.867,69.293,46.645)
O2': (63.918,68.353,46.576)
N1: (61.338,71.745,41.900)
N2: (63.122,70.432,41.220)
N3: (62.142,69.963,43.245)
N7: (59.398,71.453,45.014)
N9: (60.884,69.807,45.300)
O5': (59.596,69.601,49.073)
O3': (63.291,69.617,49.056)
OP2: (57.839,71.284,49.719)
C3': (62.307,69.506,48.043)
C1': (61.639,68.732,45.931)
C5': (60.357,68.399,49.266)
O6: (59.609,73.134,42.416)
O4': (60.823,68.120,46.916)
C8: (59.804,70.495,45.803)
C2: (62.191,70.698,42.156)
C6: (60.317,72.171,42.741)
C5: (60.253,71.380,43.920)
C4: (61.160,70.357,44.077)
P: (58.375,69.937,50.037)
C4': (61.431,68.283,48.221)
C2': (62.867,69.293,46.645)
O2': (63.918,68.353,46.576)
N1: (61.338,71.745,41.900)
N2: (63.122,70.432,41.220)
N3: (62.142,69.963,43.245)
N7: (59.398,71.453,45.014)
N9: (60.884,69.807,45.300)
O5': (59.596,69.601,49.073)
O3': (63.291,69.617,49.056)
OP1: (65.463,73.169,37.419)
OP2: (64.032,72.018,39.208)
C3': (66.719,68.210,36.758)
C1': (67.564,67.424,38.818)
C5': (67.177,70.697,37.366)
O4': (67.909,68.800,38.702)
C8: (65.413,68.241,39.898)
O2': (68.379,66.413,36.789)
C6: (64.352,65.670,42.045)
C5: (64.907,66.603,41.152)
C4: (66.097,66.257,40.536)
P: (65.355,72.225,38.561)
C4': (67.669,69.256,37.338)
C2': (67.219,66.928,37.411)
C2: (66.164,64.313,41.568)
N1: (65.017,64.508,42.236)
N3: (66.786,65.114,40.704)
N6: (63.208,65.877,42.706)
N7: (64.487,67.861,40.742)
N9: (66.414,67.315,39.716)
O5': (65.946,70.804,38.120)
O3': (66.785,68.120,35.336)
OP2: (64.032,72.018,39.208)
C3': (66.719,68.210,36.758)
C1': (67.564,67.424,38.818)
C5': (67.177,70.697,37.366)
O4': (67.909,68.800,38.702)
C8: (65.413,68.241,39.898)
O2': (68.379,66.413,36.789)
C6: (64.352,65.670,42.045)
C5: (64.907,66.603,41.152)
C4: (66.097,66.257,40.536)
P: (65.355,72.225,38.561)
C4': (67.669,69.256,37.338)
C2': (67.219,66.928,37.411)
C2: (66.164,64.313,41.568)
N1: (65.017,64.508,42.236)
N3: (66.786,65.114,40.704)
N6: (63.208,65.877,42.706)
N7: (64.487,67.861,40.742)
N9: (66.414,67.315,39.716)
O5': (65.946,70.804,38.120)
O3': (66.785,68.120,35.336)
Image (generated by PyMOL):