Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3D2X:B27:B30
Extra
PDB:
ATOM 1 O3' U A 26 -4.006 -13.689 33.420 1.00 32.81 O
ATOM 2 P G A 27 -5.104 -12.833 34.217 1.00 34.06 P
ATOM 3 OP1 G A 27 -4.443 -11.596 34.702 1.00 36.11 O
ATOM 4 OP2 G A 27 -5.747 -13.751 35.192 1.00 34.20 O
ATOM 5 O5' G A 27 -6.213 -12.454 33.132 1.00 34.25 O
ATOM 6 C5' G A 27 -5.861 -11.862 31.862 1.00 34.63 C
ATOM 7 C4' G A 27 -6.949 -12.121 30.837 1.00 35.41 C
ATOM 8 O4' G A 27 -7.064 -13.552 30.586 1.00 36.16 O
ATOM 9 C3' G A 27 -8.352 -11.697 31.242 1.00 35.90 C
ATOM 10 O3' G A 27 -8.591 -10.312 31.008 1.00 36.17 O
ATOM 11 C2' G A 27 -9.242 -12.599 30.391 1.00 35.82 C
ATOM 12 O2' G A 27 -9.436 -12.098 29.086 1.00 35.72 O
ATOM 13 C1' G A 27 -8.421 -13.892 30.332 1.00 36.40 C
ATOM 14 N9 G A 27 -8.861 -14.870 31.326 1.00 37.30 N
ATOM 15 C8 G A 27 -8.415 -14.989 32.621 1.00 38.18 C
ATOM 16 N7 G A 27 -9.043 -15.913 33.299 1.00 39.75 N
ATOM 17 C5 G A 27 -9.954 -16.448 32.397 1.00 39.72 C
ATOM 18 C6 G A 27 -10.926 -17.479 32.566 1.00 39.49 C
ATOM 19 O6 G A 27 -11.205 -18.118 33.583 1.00 40.25 O
ATOM 20 N1 G A 27 -11.617 -17.730 31.389 1.00 39.20 N
ATOM 21 C2 G A 27 -11.419 -17.074 30.206 1.00 39.06 C
ATOM 22 N2 G A 27 -12.185 -17.482 29.186 1.00 38.40 N
ATOM 23 N3 G A 27 -10.536 -16.096 30.034 1.00 39.55 N
ATOM 24 C4 G A 27 -9.840 -15.836 31.166 1.00 39.22 C
ATOM 25 P A A 28 -9.554 -9.492 32.006 1.00 36.03 P
ATOM 26 OP1 A A 28 -9.525 -8.057 31.625 1.00 35.18 O
ATOM 27 OP2 A A 28 -9.195 -9.894 33.381 1.00 36.23 O
ATOM 28 O5' A A 28 -11.006 -10.077 31.723 1.00 36.16 O
TER
ATOM 1 O3' G B 29 -15.945 -17.759 30.319 1.00 33.69 O
ATOM 2 P A B 30 -15.158 -18.913 31.105 1.00 35.06 P
ATOM 3 OP1 A B 30 -16.195 -19.857 31.600 1.00 36.15 O
ATOM 4 OP2 A B 30 -14.206 -18.287 32.063 1.00 34.40 O
ATOM 5 O5' A B 30 -14.304 -19.655 29.985 1.00 35.95 O
ATOM 6 C5' A B 30 -14.861 -19.879 28.691 1.00 36.98 C
ATOM 7 C4' A B 30 -14.059 -20.903 27.931 1.00 37.58 C
ATOM 8 O4' A B 30 -12.776 -20.352 27.540 1.00 37.32 O
ATOM 9 C3' A B 30 -13.782 -22.238 28.615 1.00 38.45 C
ATOM 10 O3' A B 30 -14.045 -23.293 27.704 1.00 40.14 O
ATOM 11 C2' A B 30 -12.280 -22.190 28.892 1.00 38.12 C
ATOM 12 O2' A B 30 -11.666 -23.464 28.829 1.00 38.56 O
ATOM 13 C1' A B 30 -11.787 -21.331 27.731 1.00 37.15 C
ATOM 14 N9 A B 30 -10.486 -20.687 27.900 1.00 35.14 N
ATOM 15 C8 A B 30 -9.830 -20.329 29.045 1.00 34.44 C
ATOM 16 N7 A B 30 -8.640 -19.828 28.836 1.00 34.54 N
ATOM 17 C5 A B 30 -8.510 -19.840 27.456 1.00 33.69 C
ATOM 18 C6 A B 30 -7.467 -19.446 26.593 1.00 33.50 C
ATOM 19 N6 A B 30 -6.302 -18.944 27.007 1.00 32.93 N
ATOM 20 N1 A B 30 -7.665 -19.591 25.267 1.00 33.45 N
ATOM 21 C2 A B 30 -8.828 -20.097 24.844 1.00 33.73 C
ATOM 22 N3 A B 30 -9.876 -20.505 25.553 1.00 34.52 N
ATOM 23 C4 A B 30 -9.648 -20.350 26.868 1.00 34.22 C
ATOM 24 P A B 31 -15.152 -24.399 28.064 1.00 41.75 P
ATOM 25 OP1 A B 31 -15.747 -24.081 29.383 1.00 41.56 O
ATOM 26 OP2 A B 31 -14.524 -25.729 27.846 1.00 41.11 O
ATOM 27 O5' A B 31 -16.274 -24.160 26.959 1.00 42.78 O
TER
ATOM 2 P G A 27 -5.104 -12.833 34.217 1.00 34.06 P
ATOM 3 OP1 G A 27 -4.443 -11.596 34.702 1.00 36.11 O
ATOM 4 OP2 G A 27 -5.747 -13.751 35.192 1.00 34.20 O
ATOM 5 O5' G A 27 -6.213 -12.454 33.132 1.00 34.25 O
ATOM 6 C5' G A 27 -5.861 -11.862 31.862 1.00 34.63 C
ATOM 7 C4' G A 27 -6.949 -12.121 30.837 1.00 35.41 C
ATOM 8 O4' G A 27 -7.064 -13.552 30.586 1.00 36.16 O
ATOM 9 C3' G A 27 -8.352 -11.697 31.242 1.00 35.90 C
ATOM 10 O3' G A 27 -8.591 -10.312 31.008 1.00 36.17 O
ATOM 11 C2' G A 27 -9.242 -12.599 30.391 1.00 35.82 C
ATOM 12 O2' G A 27 -9.436 -12.098 29.086 1.00 35.72 O
ATOM 13 C1' G A 27 -8.421 -13.892 30.332 1.00 36.40 C
ATOM 14 N9 G A 27 -8.861 -14.870 31.326 1.00 37.30 N
ATOM 15 C8 G A 27 -8.415 -14.989 32.621 1.00 38.18 C
ATOM 16 N7 G A 27 -9.043 -15.913 33.299 1.00 39.75 N
ATOM 17 C5 G A 27 -9.954 -16.448 32.397 1.00 39.72 C
ATOM 18 C6 G A 27 -10.926 -17.479 32.566 1.00 39.49 C
ATOM 19 O6 G A 27 -11.205 -18.118 33.583 1.00 40.25 O
ATOM 20 N1 G A 27 -11.617 -17.730 31.389 1.00 39.20 N
ATOM 21 C2 G A 27 -11.419 -17.074 30.206 1.00 39.06 C
ATOM 22 N2 G A 27 -12.185 -17.482 29.186 1.00 38.40 N
ATOM 23 N3 G A 27 -10.536 -16.096 30.034 1.00 39.55 N
ATOM 24 C4 G A 27 -9.840 -15.836 31.166 1.00 39.22 C
ATOM 25 P A A 28 -9.554 -9.492 32.006 1.00 36.03 P
ATOM 26 OP1 A A 28 -9.525 -8.057 31.625 1.00 35.18 O
ATOM 27 OP2 A A 28 -9.195 -9.894 33.381 1.00 36.23 O
ATOM 28 O5' A A 28 -11.006 -10.077 31.723 1.00 36.16 O
TER
ATOM 1 O3' G B 29 -15.945 -17.759 30.319 1.00 33.69 O
ATOM 2 P A B 30 -15.158 -18.913 31.105 1.00 35.06 P
ATOM 3 OP1 A B 30 -16.195 -19.857 31.600 1.00 36.15 O
ATOM 4 OP2 A B 30 -14.206 -18.287 32.063 1.00 34.40 O
ATOM 5 O5' A B 30 -14.304 -19.655 29.985 1.00 35.95 O
ATOM 6 C5' A B 30 -14.861 -19.879 28.691 1.00 36.98 C
ATOM 7 C4' A B 30 -14.059 -20.903 27.931 1.00 37.58 C
ATOM 8 O4' A B 30 -12.776 -20.352 27.540 1.00 37.32 O
ATOM 9 C3' A B 30 -13.782 -22.238 28.615 1.00 38.45 C
ATOM 10 O3' A B 30 -14.045 -23.293 27.704 1.00 40.14 O
ATOM 11 C2' A B 30 -12.280 -22.190 28.892 1.00 38.12 C
ATOM 12 O2' A B 30 -11.666 -23.464 28.829 1.00 38.56 O
ATOM 13 C1' A B 30 -11.787 -21.331 27.731 1.00 37.15 C
ATOM 14 N9 A B 30 -10.486 -20.687 27.900 1.00 35.14 N
ATOM 15 C8 A B 30 -9.830 -20.329 29.045 1.00 34.44 C
ATOM 16 N7 A B 30 -8.640 -19.828 28.836 1.00 34.54 N
ATOM 17 C5 A B 30 -8.510 -19.840 27.456 1.00 33.69 C
ATOM 18 C6 A B 30 -7.467 -19.446 26.593 1.00 33.50 C
ATOM 19 N6 A B 30 -6.302 -18.944 27.007 1.00 32.93 N
ATOM 20 N1 A B 30 -7.665 -19.591 25.267 1.00 33.45 N
ATOM 21 C2 A B 30 -8.828 -20.097 24.844 1.00 33.73 C
ATOM 22 N3 A B 30 -9.876 -20.505 25.553 1.00 34.52 N
ATOM 23 C4 A B 30 -9.648 -20.350 26.868 1.00 34.22 C
ATOM 24 P A B 31 -15.152 -24.399 28.064 1.00 41.75 P
ATOM 25 OP1 A B 31 -15.747 -24.081 29.383 1.00 41.56 O
ATOM 26 OP2 A B 31 -14.524 -25.729 27.846 1.00 41.11 O
ATOM 27 O5' A B 31 -16.274 -24.160 26.959 1.00 42.78 O
TER
Atoms:
OP1: (-4.443,-11.596,34.702)
OP2: (-5.747,-13.751,35.192)
C3': (-8.352,-11.697,31.242)
C1': (-8.421,-13.892,30.332)
C5': (-5.861,-11.862,31.862)
O6: (-11.205,-18.118,33.583)
O4': (-7.064,-13.552,30.586)
C8: (-8.415,-14.989,32.621)
C2: (-11.419,-17.074,30.206)
C6: (-10.926,-17.479,32.566)
C5: (-9.954,-16.448,32.397)
C4: (-9.840,-15.836,31.166)
P: (-5.104,-12.833,34.217)
C4': (-6.949,-12.121,30.837)
C2': (-9.242,-12.599,30.391)
O2': (-9.436,-12.098,29.086)
N1: (-11.617,-17.730,31.389)
N2: (-12.185,-17.482,29.186)
N3: (-10.536,-16.096,30.034)
N7: (-9.043,-15.913,33.299)
N9: (-8.861,-14.870,31.326)
O5': (-6.213,-12.454,33.132)
O3': (-8.591,-10.312,31.008)
OP2: (-5.747,-13.751,35.192)
C3': (-8.352,-11.697,31.242)
C1': (-8.421,-13.892,30.332)
C5': (-5.861,-11.862,31.862)
O6: (-11.205,-18.118,33.583)
O4': (-7.064,-13.552,30.586)
C8: (-8.415,-14.989,32.621)
C2: (-11.419,-17.074,30.206)
C6: (-10.926,-17.479,32.566)
C5: (-9.954,-16.448,32.397)
C4: (-9.840,-15.836,31.166)
P: (-5.104,-12.833,34.217)
C4': (-6.949,-12.121,30.837)
C2': (-9.242,-12.599,30.391)
O2': (-9.436,-12.098,29.086)
N1: (-11.617,-17.730,31.389)
N2: (-12.185,-17.482,29.186)
N3: (-10.536,-16.096,30.034)
N7: (-9.043,-15.913,33.299)
N9: (-8.861,-14.870,31.326)
O5': (-6.213,-12.454,33.132)
O3': (-8.591,-10.312,31.008)
OP1: (-16.195,-19.857,31.600)
OP2: (-14.206,-18.287,32.063)
C3': (-13.782,-22.238,28.615)
C1': (-11.787,-21.331,27.731)
C5': (-14.861,-19.879,28.691)
O4': (-12.776,-20.352,27.540)
C8: (-9.830,-20.329,29.045)
O2': (-11.666,-23.464,28.829)
C6: (-7.467,-19.446,26.593)
C5: (-8.510,-19.840,27.456)
C4: (-9.648,-20.350,26.868)
P: (-15.158,-18.913,31.105)
C4': (-14.059,-20.903,27.931)
C2': (-12.280,-22.190,28.892)
C2: (-8.828,-20.097,24.844)
N1: (-7.665,-19.591,25.267)
N3: (-9.876,-20.505,25.553)
N6: (-6.302,-18.944,27.007)
N7: (-8.640,-19.828,28.836)
N9: (-10.486,-20.687,27.900)
O5': (-14.304,-19.655,29.985)
O3': (-14.045,-23.293,27.704)
OP2: (-14.206,-18.287,32.063)
C3': (-13.782,-22.238,28.615)
C1': (-11.787,-21.331,27.731)
C5': (-14.861,-19.879,28.691)
O4': (-12.776,-20.352,27.540)
C8: (-9.830,-20.329,29.045)
O2': (-11.666,-23.464,28.829)
C6: (-7.467,-19.446,26.593)
C5: (-8.510,-19.840,27.456)
C4: (-9.648,-20.350,26.868)
P: (-15.158,-18.913,31.105)
C4': (-14.059,-20.903,27.931)
C2': (-12.280,-22.190,28.892)
C2: (-8.828,-20.097,24.844)
N1: (-7.665,-19.591,25.267)
N3: (-9.876,-20.505,25.553)
N6: (-6.302,-18.944,27.007)
N7: (-8.640,-19.828,28.836)
N9: (-10.486,-20.687,27.900)
O5': (-14.304,-19.655,29.985)
O3': (-14.045,-23.293,27.704)
Image (generated by PyMOL):