ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJW:01173:01111

Extra

PDB:
ATOM 1 O3' C A1172 31.612 90.125 178.059 1.00 75.80 O
ATOM 2 P G A1173 30.264 89.307 177.772 1.00 77.23 P
ATOM 3 OP1 G A1173 29.150 90.281 177.656 1.00 76.80 O
ATOM 4 OP2 G A1173 30.173 88.198 178.752 1.00 77.67 O
ATOM 5 O5' G A1173 30.509 88.681 176.334 1.00 78.30 O
ATOM 6 C5' G A1173 31.091 89.467 175.280 1.00 79.35 C
ATOM 7 C4' G A1173 31.289 88.615 174.054 1.00 79.24 C
ATOM 8 O4' G A1173 32.198 87.522 174.355 1.00 79.48 O
ATOM 9 C3' G A1173 30.026 87.956 173.535 1.00 78.50 C
ATOM 10 O3' G A1173 30.130 87.769 172.140 1.00 78.53 O
ATOM 11 C2' G A1173 29.998 86.633 174.292 1.00 78.50 C
ATOM 12 O2' G A1173 29.282 85.620 173.611 1.00 78.77 O
ATOM 13 C1' G A1173 31.488 86.299 174.411 1.00 78.49 C
ATOM 14 N9 G A1173 31.842 85.644 175.668 1.00 78.31 N
ATOM 15 C8 G A1173 31.188 85.750 176.873 1.00 78.39 C
ATOM 16 N7 G A1173 31.741 85.043 177.820 1.00 79.58 N
ATOM 17 C5 G A1173 32.826 84.430 177.207 1.00 79.06 C
ATOM 18 C6 G A1173 33.795 83.532 177.732 1.00 78.79 C
ATOM 19 O6 G A1173 33.885 83.076 178.880 1.00 78.60 O
ATOM 20 N1 G A1173 34.722 83.161 176.767 1.00 78.28 N
ATOM 21 C2 G A1173 34.721 83.588 175.464 1.00 78.36 C
ATOM 22 N2 G A1173 35.708 83.120 174.692 1.00 77.91 N
ATOM 23 N3 G A1173 33.819 84.415 174.957 1.00 78.74 N
ATOM 24 C4 G A1173 32.907 84.795 175.879 1.00 78.81 C
ATOM 25 P A A1174 28.838 87.986 171.224 1.00 79.06 P
ATOM 26 OP1 A A1174 28.804 89.407 170.796 1.00 77.12 O
ATOM 27 OP2 A A1174 27.666 87.395 171.920 1.00 78.87 O
ATOM 28 O5' A A1174 29.139 87.089 169.954 1.00 79.23 O
TER

ATOM 1 O3' G B1110 37.567 80.144 174.819 1.00 71.94 O
ATOM 2 P A B1111 39.069 80.688 175.014 1.00 73.24 P
ATOM 3 OP1 A B1111 39.768 79.831 176.010 1.00 73.91 O
ATOM 4 OP2 A B1111 38.984 82.153 175.242 1.00 73.22 O
ATOM 5 O5' A B1111 39.750 80.415 173.599 1.00 72.91 O
ATOM 6 C5' A B1111 39.987 79.065 173.143 1.00 73.93 C
ATOM 7 C4' A B1111 39.705 78.953 171.664 1.00 74.83 C
ATOM 8 O4' A B1111 38.288 79.143 171.414 1.00 74.22 O
ATOM 9 C3' A B1111 40.380 80.012 170.817 1.00 76.46 C
ATOM 10 O3' A B1111 41.724 79.659 170.532 1.00 79.30 O
ATOM 11 C2' A B1111 39.487 80.065 169.587 1.00 75.63 C
ATOM 12 O2' A B1111 39.724 79.004 168.688 1.00 76.14 O
ATOM 13 C1' A B1111 38.106 79.887 170.221 1.00 74.20 C
ATOM 14 N9 A B1111 37.468 81.156 170.573 1.00 72.94 N
ATOM 15 C8 A B1111 37.384 81.731 171.815 1.00 72.22 C
ATOM 16 N7 A B1111 36.748 82.875 171.826 1.00 72.83 N
ATOM 17 C5 A B1111 36.388 83.070 170.503 1.00 72.74 C
ATOM 18 C6 A B1111 35.691 84.103 169.857 1.00 72.73 C
ATOM 19 N6 A B1111 35.205 85.175 170.485 1.00 72.21 N
ATOM 20 N1 A B1111 35.506 83.996 168.526 1.00 73.17 N
ATOM 21 C2 A B1111 35.989 82.919 167.897 1.00 72.75 C
ATOM 22 N3 A B1111 36.656 81.882 168.393 1.00 72.88 N
ATOM 23 C4 A B1111 36.826 82.020 169.718 1.00 72.96 C
ATOM 24 P C B1112 42.897 80.716 170.827 1.00 82.63 P
ATOM 25 OP1 C B1112 44.177 80.055 170.439 1.00 81.51 O
ATOM 26 OP2 C B1112 42.733 81.263 172.211 1.00 80.59 O
ATOM 27 O5' C B1112 42.602 81.892 169.793 1.00 82.37 O
TER

Atoms:
OP1: (29.150,90.281,177.656)
OP2: (30.173,88.198,178.752)
C3': (30.026,87.956,173.535)
C1': (31.488,86.299,174.411)
C5': (31.091,89.467,175.280)
O6: (33.885,83.076,178.880)
O4': (32.198,87.522,174.355)
C8: (31.188,85.750,176.873)
C2: (34.721,83.588,175.464)
C6: (33.795,83.532,177.732)
C5: (32.826,84.430,177.207)
C4: (32.907,84.795,175.879)
P: (30.264,89.307,177.772)
C4': (31.289,88.615,174.054)
C2': (29.998,86.633,174.292)
O2': (29.282,85.620,173.611)
N1: (34.722,83.161,176.767)
N2: (35.708,83.120,174.692)
N3: (33.819,84.415,174.957)
N7: (31.741,85.043,177.820)
N9: (31.842,85.644,175.668)
O5': (30.509,88.681,176.334)
O3': (30.130,87.769,172.140)
OP1: (39.768,79.831,176.010)
OP2: (38.984,82.153,175.242)
C3': (40.380,80.012,170.817)
C1': (38.106,79.887,170.221)
C5': (39.987,79.065,173.143)
O4': (38.288,79.143,171.414)
C8: (37.384,81.731,171.815)
O2': (39.724,79.004,168.688)
C6: (35.691,84.103,169.857)
C5: (36.388,83.070,170.503)
C4: (36.826,82.020,169.718)
P: (39.069,80.688,175.014)
C4': (39.705,78.953,171.664)
C2': (39.487,80.065,169.587)
C2: (35.989,82.919,167.897)
N1: (35.506,83.996,168.526)
N3: (36.656,81.882,168.393)
N6: (35.205,85.175,170.485)
N7: (36.748,82.875,171.826)
N9: (37.468,81.156,170.573)
O5': (39.750,80.415,173.599)
O3': (41.724,79.659,170.532)
Image (generated by PyMOL):
PyMOL image
show in jmol