Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1K8A:A576:A557
Extra
PDB:
ATOM 1 O3' A A 575 -8.895 87.308 110.832 1.00 68.43 O
ATOM 2 P G A 576 -9.224 85.881 110.163 1.00 71.61 P
ATOM 3 OP1 G A 576 -10.700 85.690 110.035 1.00 72.36 O
ATOM 4 OP2 G A 576 -8.419 84.857 110.873 1.00 70.55 O
ATOM 5 O5' G A 576 -8.663 86.046 108.679 1.00 70.68 O
ATOM 6 C5' G A 576 -7.297 86.433 108.451 1.00 67.82 C
ATOM 7 C4' G A 576 -7.179 87.942 108.308 1.00 65.36 C
ATOM 8 O4' G A 576 -5.892 88.354 108.807 1.00 63.32 O
ATOM 9 C3' G A 576 -7.261 88.552 106.912 1.00 64.31 C
ATOM 10 O3' G A 576 -7.578 89.942 107.085 1.00 65.91 O
ATOM 11 C2' G A 576 -5.816 88.458 106.462 1.00 62.64 C
ATOM 12 O2' G A 576 -5.488 89.342 105.411 1.00 62.40 O
ATOM 13 C1' G A 576 -5.118 88.873 107.752 1.00 61.57 C
ATOM 14 N9 G A 576 -3.762 88.391 107.952 1.00 59.07 N
ATOM 15 C8 G A 576 -3.178 87.273 107.421 1.00 57.82 C
ATOM 16 N7 G A 576 -1.979 87.054 107.881 1.00 56.15 N
ATOM 17 C5 G A 576 -1.758 88.102 108.756 1.00 57.01 C
ATOM 18 C6 G A 576 -0.659 88.383 109.567 1.00 56.97 C
ATOM 19 O6 G A 576 0.369 87.722 109.706 1.00 57.30 O
ATOM 20 N1 G A 576 -0.833 89.573 110.281 1.00 56.56 N
ATOM 21 C2 G A 576 -1.942 90.379 110.221 1.00 55.17 C
ATOM 22 N2 G A 576 -1.912 91.500 110.955 1.00 54.07 N
ATOM 23 N3 G A 576 -2.996 90.104 109.486 1.00 55.38 N
ATOM 24 C4 G A 576 -2.836 88.958 108.780 1.00 57.56 C
ATOM 25 P U A 577 -8.033 90.854 105.832 1.00 67.51 P
ATOM 26 OP1 U A 577 -8.760 89.981 104.865 1.00 67.43 O
ATOM 27 OP2 U A 577 -6.913 91.696 105.352 1.00 66.66 O
ATOM 28 O5' U A 577 -9.075 91.851 106.506 1.00 65.18 O
TER
ATOM 1 O3' G B 556 0.530 94.646 112.736 1.00 45.42 O
ATOM 2 P A B 557 0.115 93.403 113.661 1.00 44.09 P
ATOM 3 OP1 A B 557 0.820 93.584 114.936 1.00 45.60 O
ATOM 4 OP2 A B 557 0.280 92.138 112.894 1.00 42.07 O
ATOM 5 O5' A B 557 -1.436 93.632 113.898 1.00 45.71 O
ATOM 6 C5' A B 557 -1.948 93.963 115.192 1.00 47.13 C
ATOM 7 C4' A B 557 -1.825 95.440 115.426 1.00 49.31 C
ATOM 8 O4' A B 557 -2.317 96.160 114.268 1.00 48.91 O
ATOM 9 C3' A B 557 -2.667 95.936 116.578 1.00 50.96 C
ATOM 10 O3' A B 557 -2.016 95.738 117.813 1.00 54.97 O
ATOM 11 C2' A B 557 -2.908 97.387 116.201 1.00 49.44 C
ATOM 12 O2' A B 557 -1.795 98.214 116.439 1.00 46.40 O
ATOM 13 C1' A B 557 -3.114 97.252 114.690 1.00 48.69 C
ATOM 14 N9 A B 557 -4.498 96.961 114.306 1.00 47.72 N
ATOM 15 C8 A B 557 -4.978 95.848 113.657 1.00 47.93 C
ATOM 16 N7 A B 557 -6.271 95.863 113.462 1.00 47.65 N
ATOM 17 C5 A B 557 -6.673 97.066 114.015 1.00 47.69 C
ATOM 18 C6 A B 557 -7.927 97.671 114.133 1.00 47.78 C
ATOM 19 N6 A B 557 -9.056 97.107 113.707 1.00 48.63 N
ATOM 20 N1 A B 557 -7.986 98.888 114.722 1.00 48.29 N
ATOM 21 C2 A B 557 -6.852 99.433 115.181 1.00 48.67 C
ATOM 22 N3 A B 557 -5.615 98.953 115.144 1.00 48.81 N
ATOM 23 C4 A B 557 -5.592 97.755 114.535 1.00 48.27 C
ATOM 24 P C B 558 -2.884 95.395 119.111 1.00 58.62 P
ATOM 25 OP1 C B 558 -1.914 95.035 120.167 1.00 58.47 O
ATOM 26 OP2 C B 558 -3.961 94.444 118.750 1.00 58.00 O
ATOM 27 O5' C B 558 -3.526 96.799 119.486 1.00 59.84 O
TER
ATOM 2 P G A 576 -9.224 85.881 110.163 1.00 71.61 P
ATOM 3 OP1 G A 576 -10.700 85.690 110.035 1.00 72.36 O
ATOM 4 OP2 G A 576 -8.419 84.857 110.873 1.00 70.55 O
ATOM 5 O5' G A 576 -8.663 86.046 108.679 1.00 70.68 O
ATOM 6 C5' G A 576 -7.297 86.433 108.451 1.00 67.82 C
ATOM 7 C4' G A 576 -7.179 87.942 108.308 1.00 65.36 C
ATOM 8 O4' G A 576 -5.892 88.354 108.807 1.00 63.32 O
ATOM 9 C3' G A 576 -7.261 88.552 106.912 1.00 64.31 C
ATOM 10 O3' G A 576 -7.578 89.942 107.085 1.00 65.91 O
ATOM 11 C2' G A 576 -5.816 88.458 106.462 1.00 62.64 C
ATOM 12 O2' G A 576 -5.488 89.342 105.411 1.00 62.40 O
ATOM 13 C1' G A 576 -5.118 88.873 107.752 1.00 61.57 C
ATOM 14 N9 G A 576 -3.762 88.391 107.952 1.00 59.07 N
ATOM 15 C8 G A 576 -3.178 87.273 107.421 1.00 57.82 C
ATOM 16 N7 G A 576 -1.979 87.054 107.881 1.00 56.15 N
ATOM 17 C5 G A 576 -1.758 88.102 108.756 1.00 57.01 C
ATOM 18 C6 G A 576 -0.659 88.383 109.567 1.00 56.97 C
ATOM 19 O6 G A 576 0.369 87.722 109.706 1.00 57.30 O
ATOM 20 N1 G A 576 -0.833 89.573 110.281 1.00 56.56 N
ATOM 21 C2 G A 576 -1.942 90.379 110.221 1.00 55.17 C
ATOM 22 N2 G A 576 -1.912 91.500 110.955 1.00 54.07 N
ATOM 23 N3 G A 576 -2.996 90.104 109.486 1.00 55.38 N
ATOM 24 C4 G A 576 -2.836 88.958 108.780 1.00 57.56 C
ATOM 25 P U A 577 -8.033 90.854 105.832 1.00 67.51 P
ATOM 26 OP1 U A 577 -8.760 89.981 104.865 1.00 67.43 O
ATOM 27 OP2 U A 577 -6.913 91.696 105.352 1.00 66.66 O
ATOM 28 O5' U A 577 -9.075 91.851 106.506 1.00 65.18 O
TER
ATOM 1 O3' G B 556 0.530 94.646 112.736 1.00 45.42 O
ATOM 2 P A B 557 0.115 93.403 113.661 1.00 44.09 P
ATOM 3 OP1 A B 557 0.820 93.584 114.936 1.00 45.60 O
ATOM 4 OP2 A B 557 0.280 92.138 112.894 1.00 42.07 O
ATOM 5 O5' A B 557 -1.436 93.632 113.898 1.00 45.71 O
ATOM 6 C5' A B 557 -1.948 93.963 115.192 1.00 47.13 C
ATOM 7 C4' A B 557 -1.825 95.440 115.426 1.00 49.31 C
ATOM 8 O4' A B 557 -2.317 96.160 114.268 1.00 48.91 O
ATOM 9 C3' A B 557 -2.667 95.936 116.578 1.00 50.96 C
ATOM 10 O3' A B 557 -2.016 95.738 117.813 1.00 54.97 O
ATOM 11 C2' A B 557 -2.908 97.387 116.201 1.00 49.44 C
ATOM 12 O2' A B 557 -1.795 98.214 116.439 1.00 46.40 O
ATOM 13 C1' A B 557 -3.114 97.252 114.690 1.00 48.69 C
ATOM 14 N9 A B 557 -4.498 96.961 114.306 1.00 47.72 N
ATOM 15 C8 A B 557 -4.978 95.848 113.657 1.00 47.93 C
ATOM 16 N7 A B 557 -6.271 95.863 113.462 1.00 47.65 N
ATOM 17 C5 A B 557 -6.673 97.066 114.015 1.00 47.69 C
ATOM 18 C6 A B 557 -7.927 97.671 114.133 1.00 47.78 C
ATOM 19 N6 A B 557 -9.056 97.107 113.707 1.00 48.63 N
ATOM 20 N1 A B 557 -7.986 98.888 114.722 1.00 48.29 N
ATOM 21 C2 A B 557 -6.852 99.433 115.181 1.00 48.67 C
ATOM 22 N3 A B 557 -5.615 98.953 115.144 1.00 48.81 N
ATOM 23 C4 A B 557 -5.592 97.755 114.535 1.00 48.27 C
ATOM 24 P C B 558 -2.884 95.395 119.111 1.00 58.62 P
ATOM 25 OP1 C B 558 -1.914 95.035 120.167 1.00 58.47 O
ATOM 26 OP2 C B 558 -3.961 94.444 118.750 1.00 58.00 O
ATOM 27 O5' C B 558 -3.526 96.799 119.486 1.00 59.84 O
TER
Atoms:
OP1: (-10.700,85.690,110.035)
OP2: (-8.419,84.857,110.873)
C3': (-7.261,88.552,106.912)
C1': (-5.118,88.873,107.752)
C5': (-7.297,86.433,108.451)
O6: (0.369,87.722,109.706)
O4': (-5.892,88.354,108.807)
C8: (-3.178,87.273,107.421)
C2: (-1.942,90.379,110.221)
C6: (-0.659,88.383,109.567)
C5: (-1.758,88.102,108.756)
C4: (-2.836,88.958,108.780)
P: (-9.224,85.881,110.163)
C4': (-7.179,87.942,108.308)
C2': (-5.816,88.458,106.462)
O2': (-5.488,89.342,105.411)
N1: (-0.833,89.573,110.281)
N2: (-1.912,91.500,110.955)
N3: (-2.996,90.104,109.486)
N7: (-1.979,87.054,107.881)
N9: (-3.762,88.391,107.952)
O5': (-8.663,86.046,108.679)
O3': (-7.578,89.942,107.085)
OP2: (-8.419,84.857,110.873)
C3': (-7.261,88.552,106.912)
C1': (-5.118,88.873,107.752)
C5': (-7.297,86.433,108.451)
O6: (0.369,87.722,109.706)
O4': (-5.892,88.354,108.807)
C8: (-3.178,87.273,107.421)
C2: (-1.942,90.379,110.221)
C6: (-0.659,88.383,109.567)
C5: (-1.758,88.102,108.756)
C4: (-2.836,88.958,108.780)
P: (-9.224,85.881,110.163)
C4': (-7.179,87.942,108.308)
C2': (-5.816,88.458,106.462)
O2': (-5.488,89.342,105.411)
N1: (-0.833,89.573,110.281)
N2: (-1.912,91.500,110.955)
N3: (-2.996,90.104,109.486)
N7: (-1.979,87.054,107.881)
N9: (-3.762,88.391,107.952)
O5': (-8.663,86.046,108.679)
O3': (-7.578,89.942,107.085)
OP1: (0.820,93.584,114.936)
OP2: (0.280,92.138,112.894)
C3': (-2.667,95.936,116.578)
C1': (-3.114,97.252,114.690)
C5': (-1.948,93.963,115.192)
O4': (-2.317,96.160,114.268)
C8: (-4.978,95.848,113.657)
O2': (-1.795,98.214,116.439)
C6: (-7.927,97.671,114.133)
C5: (-6.673,97.066,114.015)
C4: (-5.592,97.755,114.535)
P: (0.115,93.403,113.661)
C4': (-1.825,95.440,115.426)
C2': (-2.908,97.387,116.201)
C2: (-6.852,99.433,115.181)
N1: (-7.986,98.888,114.722)
N3: (-5.615,98.953,115.144)
N6: (-9.056,97.107,113.707)
N7: (-6.271,95.863,113.462)
N9: (-4.498,96.961,114.306)
O5': (-1.436,93.632,113.898)
O3': (-2.016,95.738,117.813)
OP2: (0.280,92.138,112.894)
C3': (-2.667,95.936,116.578)
C1': (-3.114,97.252,114.690)
C5': (-1.948,93.963,115.192)
O4': (-2.317,96.160,114.268)
C8: (-4.978,95.848,113.657)
O2': (-1.795,98.214,116.439)
C6: (-7.927,97.671,114.133)
C5: (-6.673,97.066,114.015)
C4: (-5.592,97.755,114.535)
P: (0.115,93.403,113.661)
C4': (-1.825,95.440,115.426)
C2': (-2.908,97.387,116.201)
C2: (-6.852,99.433,115.181)
N1: (-7.986,98.888,114.722)
N3: (-5.615,98.953,115.144)
N6: (-9.056,97.107,113.707)
N7: (-6.271,95.863,113.462)
N9: (-4.498,96.961,114.306)
O5': (-1.436,93.632,113.898)
O3': (-2.016,95.738,117.813)
Image (generated by PyMOL):