Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1JJ2:02041:02490
Extra
PDB:
ATOM 1 O3' G A2040 52.079 127.520 105.941 1.00 23.78 O
ATOM 2 P A A2041 52.515 127.403 104.389 1.00 23.30 P
ATOM 3 OP1 A A2041 52.889 125.983 104.209 1.00 22.24 O
ATOM 4 OP2 A A2041 53.491 128.464 104.035 1.00 20.66 O
ATOM 5 O5' A A2041 51.165 127.669 103.589 1.00 22.08 O
ATOM 6 C5' A A2041 50.017 126.818 103.784 1.00 23.88 C
ATOM 7 C4' A A2041 48.841 127.316 102.977 1.00 23.64 C
ATOM 8 O4' A A2041 48.503 128.666 103.390 1.00 22.87 O
ATOM 9 C3' A A2041 49.033 127.424 101.468 1.00 23.99 C
ATOM 10 O3' A A2041 48.824 126.157 100.843 1.00 24.74 O
ATOM 11 C2' A A2041 47.936 128.412 101.087 1.00 24.88 C
ATOM 12 O2' A A2041 46.667 127.787 101.026 1.00 28.19 O
ATOM 13 C1' A A2041 47.953 129.372 102.285 1.00 24.22 C
ATOM 14 N9 A A2041 48.729 130.597 102.078 1.00 25.23 N
ATOM 15 C8 A A2041 50.001 130.870 102.523 1.00 25.35 C
ATOM 16 N7 A A2041 50.426 132.068 102.207 1.00 25.79 N
ATOM 17 C5 A A2041 49.372 132.619 101.493 1.00 25.59 C
ATOM 18 C6 A A2041 49.200 133.874 100.871 1.00 25.92 C
ATOM 19 N6 A A2041 50.135 134.834 100.855 1.00 20.96 N
ATOM 20 N1 A A2041 48.020 134.108 100.251 1.00 24.15 N
ATOM 21 C2 A A2041 47.097 133.146 100.252 1.00 22.69 C
ATOM 22 N3 A A2041 47.144 131.931 100.791 1.00 25.38 N
ATOM 23 C4 A A2041 48.321 131.726 101.405 1.00 24.77 C
ATOM 24 P A A2042 49.517 125.812 99.426 1.00 22.82 P
ATOM 25 OP1 A A2042 49.593 127.026 98.574 1.00 24.91 O
ATOM 26 OP2 A A2042 48.807 124.614 98.927 1.00 23.51 O
ATOM 27 O5' A A2042 51.001 125.394 99.810 1.00 24.34 O
TER
ATOM 1 O3' U B2489 53.071 145.411 97.595 1.00 28.01 O
ATOM 2 P A B2490 52.176 144.714 98.735 1.00 26.93 P
ATOM 3 OP1 A B2490 51.282 145.762 99.277 1.00 29.89 O
ATOM 4 OP2 A B2490 53.022 143.948 99.654 1.00 28.79 O
ATOM 5 O5' A B2490 51.227 143.748 97.898 1.00 32.99 O
ATOM 6 C5' A B2490 51.342 142.341 97.991 1.00 30.47 C
ATOM 7 C4' A B2490 50.017 141.737 98.368 1.00 30.46 C
ATOM 8 O4' A B2490 50.313 140.457 98.973 1.00 30.73 O
ATOM 9 C3' A B2490 49.216 142.480 99.434 1.00 31.09 C
ATOM 10 O3' A B2490 47.878 142.002 99.436 1.00 31.58 O
ATOM 11 C2' A B2490 49.889 142.009 100.716 1.00 31.07 C
ATOM 12 O2' A B2490 49.039 142.033 101.844 1.00 34.83 O
ATOM 13 C1' A B2490 50.225 140.559 100.377 1.00 30.94 C
ATOM 14 N9 A B2490 51.517 140.191 100.938 1.00 30.48 N
ATOM 15 C8 A B2490 52.732 140.786 100.713 1.00 30.20 C
ATOM 16 N7 A B2490 53.707 140.270 101.413 1.00 31.72 N
ATOM 17 C5 A B2490 53.095 139.258 102.138 1.00 30.49 C
ATOM 18 C6 A B2490 53.585 138.350 103.082 1.00 28.81 C
ATOM 19 N6 A B2490 54.853 138.324 103.488 1.00 27.84 N
ATOM 20 N1 A B2490 52.713 137.464 103.609 1.00 28.39 N
ATOM 21 C2 A B2490 51.438 137.508 103.216 1.00 27.99 C
ATOM 22 N3 A B2490 50.855 138.325 102.349 1.00 28.90 N
ATOM 23 C4 A B2490 51.750 139.187 101.840 1.00 29.41 C
ATOM 24 P U B2491 46.701 142.840 98.737 1.00 31.70 P
ATOM 25 OP1 U B2491 47.250 143.621 97.606 1.00 35.68 O
ATOM 26 OP2 U B2491 45.950 143.528 99.795 1.00 33.09 O
ATOM 27 O5' U B2491 45.790 141.663 98.172 1.00 33.85 O
TER
ATOM 2 P A A2041 52.515 127.403 104.389 1.00 23.30 P
ATOM 3 OP1 A A2041 52.889 125.983 104.209 1.00 22.24 O
ATOM 4 OP2 A A2041 53.491 128.464 104.035 1.00 20.66 O
ATOM 5 O5' A A2041 51.165 127.669 103.589 1.00 22.08 O
ATOM 6 C5' A A2041 50.017 126.818 103.784 1.00 23.88 C
ATOM 7 C4' A A2041 48.841 127.316 102.977 1.00 23.64 C
ATOM 8 O4' A A2041 48.503 128.666 103.390 1.00 22.87 O
ATOM 9 C3' A A2041 49.033 127.424 101.468 1.00 23.99 C
ATOM 10 O3' A A2041 48.824 126.157 100.843 1.00 24.74 O
ATOM 11 C2' A A2041 47.936 128.412 101.087 1.00 24.88 C
ATOM 12 O2' A A2041 46.667 127.787 101.026 1.00 28.19 O
ATOM 13 C1' A A2041 47.953 129.372 102.285 1.00 24.22 C
ATOM 14 N9 A A2041 48.729 130.597 102.078 1.00 25.23 N
ATOM 15 C8 A A2041 50.001 130.870 102.523 1.00 25.35 C
ATOM 16 N7 A A2041 50.426 132.068 102.207 1.00 25.79 N
ATOM 17 C5 A A2041 49.372 132.619 101.493 1.00 25.59 C
ATOM 18 C6 A A2041 49.200 133.874 100.871 1.00 25.92 C
ATOM 19 N6 A A2041 50.135 134.834 100.855 1.00 20.96 N
ATOM 20 N1 A A2041 48.020 134.108 100.251 1.00 24.15 N
ATOM 21 C2 A A2041 47.097 133.146 100.252 1.00 22.69 C
ATOM 22 N3 A A2041 47.144 131.931 100.791 1.00 25.38 N
ATOM 23 C4 A A2041 48.321 131.726 101.405 1.00 24.77 C
ATOM 24 P A A2042 49.517 125.812 99.426 1.00 22.82 P
ATOM 25 OP1 A A2042 49.593 127.026 98.574 1.00 24.91 O
ATOM 26 OP2 A A2042 48.807 124.614 98.927 1.00 23.51 O
ATOM 27 O5' A A2042 51.001 125.394 99.810 1.00 24.34 O
TER
ATOM 1 O3' U B2489 53.071 145.411 97.595 1.00 28.01 O
ATOM 2 P A B2490 52.176 144.714 98.735 1.00 26.93 P
ATOM 3 OP1 A B2490 51.282 145.762 99.277 1.00 29.89 O
ATOM 4 OP2 A B2490 53.022 143.948 99.654 1.00 28.79 O
ATOM 5 O5' A B2490 51.227 143.748 97.898 1.00 32.99 O
ATOM 6 C5' A B2490 51.342 142.341 97.991 1.00 30.47 C
ATOM 7 C4' A B2490 50.017 141.737 98.368 1.00 30.46 C
ATOM 8 O4' A B2490 50.313 140.457 98.973 1.00 30.73 O
ATOM 9 C3' A B2490 49.216 142.480 99.434 1.00 31.09 C
ATOM 10 O3' A B2490 47.878 142.002 99.436 1.00 31.58 O
ATOM 11 C2' A B2490 49.889 142.009 100.716 1.00 31.07 C
ATOM 12 O2' A B2490 49.039 142.033 101.844 1.00 34.83 O
ATOM 13 C1' A B2490 50.225 140.559 100.377 1.00 30.94 C
ATOM 14 N9 A B2490 51.517 140.191 100.938 1.00 30.48 N
ATOM 15 C8 A B2490 52.732 140.786 100.713 1.00 30.20 C
ATOM 16 N7 A B2490 53.707 140.270 101.413 1.00 31.72 N
ATOM 17 C5 A B2490 53.095 139.258 102.138 1.00 30.49 C
ATOM 18 C6 A B2490 53.585 138.350 103.082 1.00 28.81 C
ATOM 19 N6 A B2490 54.853 138.324 103.488 1.00 27.84 N
ATOM 20 N1 A B2490 52.713 137.464 103.609 1.00 28.39 N
ATOM 21 C2 A B2490 51.438 137.508 103.216 1.00 27.99 C
ATOM 22 N3 A B2490 50.855 138.325 102.349 1.00 28.90 N
ATOM 23 C4 A B2490 51.750 139.187 101.840 1.00 29.41 C
ATOM 24 P U B2491 46.701 142.840 98.737 1.00 31.70 P
ATOM 25 OP1 U B2491 47.250 143.621 97.606 1.00 35.68 O
ATOM 26 OP2 U B2491 45.950 143.528 99.795 1.00 33.09 O
ATOM 27 O5' U B2491 45.790 141.663 98.172 1.00 33.85 O
TER
Atoms:
OP1: (52.889,125.983,104.209)
OP2: (53.491,128.464,104.035)
C3': (49.033,127.424,101.468)
C1': (47.953,129.372,102.285)
C5': (50.017,126.818,103.784)
O4': (48.503,128.666,103.390)
C8: (50.001,130.870,102.523)
O2': (46.667,127.787,101.026)
C6: (49.200,133.874,100.871)
C5: (49.372,132.619,101.493)
C4: (48.321,131.726,101.405)
P: (52.515,127.403,104.389)
C4': (48.841,127.316,102.977)
C2': (47.936,128.412,101.087)
C2: (47.097,133.146,100.252)
N1: (48.020,134.108,100.251)
N3: (47.144,131.931,100.791)
N6: (50.135,134.834,100.855)
N7: (50.426,132.068,102.207)
N9: (48.729,130.597,102.078)
O5': (51.165,127.669,103.589)
O3': (48.824,126.157,100.843)
OP2: (53.491,128.464,104.035)
C3': (49.033,127.424,101.468)
C1': (47.953,129.372,102.285)
C5': (50.017,126.818,103.784)
O4': (48.503,128.666,103.390)
C8: (50.001,130.870,102.523)
O2': (46.667,127.787,101.026)
C6: (49.200,133.874,100.871)
C5: (49.372,132.619,101.493)
C4: (48.321,131.726,101.405)
P: (52.515,127.403,104.389)
C4': (48.841,127.316,102.977)
C2': (47.936,128.412,101.087)
C2: (47.097,133.146,100.252)
N1: (48.020,134.108,100.251)
N3: (47.144,131.931,100.791)
N6: (50.135,134.834,100.855)
N7: (50.426,132.068,102.207)
N9: (48.729,130.597,102.078)
O5': (51.165,127.669,103.589)
O3': (48.824,126.157,100.843)
OP1: (51.282,145.762,99.277)
OP2: (53.022,143.948,99.654)
C3': (49.216,142.480,99.434)
C1': (50.225,140.559,100.377)
C5': (51.342,142.341,97.991)
O4': (50.313,140.457,98.973)
C8: (52.732,140.786,100.713)
O2': (49.039,142.033,101.844)
C6: (53.585,138.350,103.082)
C5: (53.095,139.258,102.138)
C4: (51.750,139.187,101.840)
P: (52.176,144.714,98.735)
C4': (50.017,141.737,98.368)
C2': (49.889,142.009,100.716)
C2: (51.438,137.508,103.216)
N1: (52.713,137.464,103.609)
N3: (50.855,138.325,102.349)
N6: (54.853,138.324,103.488)
N7: (53.707,140.270,101.413)
N9: (51.517,140.191,100.938)
O5': (51.227,143.748,97.898)
O3': (47.878,142.002,99.436)
OP2: (53.022,143.948,99.654)
C3': (49.216,142.480,99.434)
C1': (50.225,140.559,100.377)
C5': (51.342,142.341,97.991)
O4': (50.313,140.457,98.973)
C8: (52.732,140.786,100.713)
O2': (49.039,142.033,101.844)
C6: (53.585,138.350,103.082)
C5: (53.095,139.258,102.138)
C4: (51.750,139.187,101.840)
P: (52.176,144.714,98.735)
C4': (50.017,141.737,98.368)
C2': (49.889,142.009,100.716)
C2: (51.438,137.508,103.216)
N1: (52.713,137.464,103.609)
N3: (50.855,138.325,102.349)
N6: (54.853,138.324,103.488)
N7: (53.707,140.270,101.413)
N9: (51.517,140.191,100.938)
O5': (51.227,143.748,97.898)
O3': (47.878,142.002,99.436)
Image (generated by PyMOL):