Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1K9M:A2041:A2490
Extra
PDB:
ATOM 1 O3' G A2040 52.206 127.795 106.526 1.00 27.95 O
ATOM 2 P A A2041 52.634 127.665 104.978 1.00 29.20 P
ATOM 3 OP1 A A2041 52.987 126.248 104.738 1.00 29.71 O
ATOM 4 OP2 A A2041 53.619 128.723 104.673 1.00 29.30 O
ATOM 5 O5' A A2041 51.299 127.970 104.175 1.00 27.65 O
ATOM 6 C5' A A2041 50.160 127.118 104.293 1.00 26.67 C
ATOM 7 C4' A A2041 49.021 127.652 103.460 1.00 27.73 C
ATOM 8 O4' A A2041 48.736 129.009 103.871 1.00 28.13 O
ATOM 9 C3' A A2041 49.229 127.752 101.957 1.00 27.31 C
ATOM 10 O3' A A2041 48.941 126.496 101.346 1.00 27.37 O
ATOM 11 C2' A A2041 48.198 128.811 101.566 1.00 27.51 C
ATOM 12 O2' A A2041 46.894 128.265 101.510 1.00 29.01 O
ATOM 13 C1' A A2041 48.206 129.731 102.782 1.00 27.28 C
ATOM 14 N9 A A2041 48.992 130.945 102.579 1.00 27.68 N
ATOM 15 C8 A A2041 50.275 131.203 102.970 1.00 28.53 C
ATOM 16 N7 A A2041 50.709 132.392 102.614 1.00 29.24 N
ATOM 17 C5 A A2041 49.637 132.951 101.943 1.00 29.09 C
ATOM 18 C6 A A2041 49.465 134.181 101.301 1.00 28.84 C
ATOM 19 N6 A A2041 50.424 135.101 101.198 1.00 27.58 N
ATOM 20 N1 A A2041 48.266 134.432 100.742 1.00 28.90 N
ATOM 21 C2 A A2041 47.324 133.496 100.805 1.00 27.76 C
ATOM 22 N3 A A2041 47.367 132.298 101.362 1.00 29.06 N
ATOM 23 C4 A A2041 48.567 132.078 101.923 1.00 28.27 C
ATOM 24 P A A2042 49.678 126.069 99.982 1.00 28.14 P
ATOM 25 OP1 A A2042 49.689 127.171 98.983 1.00 27.84 O
ATOM 26 OP2 A A2042 49.064 124.779 99.631 1.00 26.79 O
ATOM 27 O5' A A2042 51.169 125.759 100.428 1.00 25.68 O
TER
ATOM 1 O3' U B2489 53.305 145.739 98.014 1.00 30.55 O
ATOM 2 P A B2490 52.527 145.091 99.218 1.00 31.75 P
ATOM 3 OP1 A B2490 51.683 146.134 99.856 1.00 32.93 O
ATOM 4 OP2 A B2490 53.495 144.346 100.028 1.00 30.72 O
ATOM 5 O5' A B2490 51.573 144.103 98.426 1.00 33.12 O
ATOM 6 C5' A B2490 51.689 142.703 98.532 1.00 31.93 C
ATOM 7 C4' A B2490 50.337 142.126 98.813 1.00 33.23 C
ATOM 8 O4' A B2490 50.534 140.849 99.442 1.00 35.29 O
ATOM 9 C3' A B2490 49.537 142.901 99.845 1.00 34.89 C
ATOM 10 O3' A B2490 48.218 142.384 99.844 1.00 34.81 O
ATOM 11 C2' A B2490 50.216 142.485 101.142 1.00 35.90 C
ATOM 12 O2' A B2490 49.341 142.625 102.242 1.00 36.25 O
ATOM 13 C1' A B2490 50.513 141.005 100.857 1.00 35.24 C
ATOM 14 N9 A B2490 51.815 140.563 101.368 1.00 33.99 N
ATOM 15 C8 A B2490 53.055 141.065 101.064 1.00 32.61 C
ATOM 16 N7 A B2490 54.027 140.499 101.719 1.00 32.17 N
ATOM 17 C5 A B2490 53.391 139.551 102.502 1.00 32.53 C
ATOM 18 C6 A B2490 53.870 138.630 103.451 1.00 32.64 C
ATOM 19 N6 A B2490 55.150 138.540 103.818 1.00 33.24 N
ATOM 20 N1 A B2490 52.972 137.805 104.033 1.00 31.97 N
ATOM 21 C2 A B2490 51.684 137.926 103.692 1.00 31.29 C
ATOM 22 N3 A B2490 51.116 138.770 102.838 1.00 32.58 N
ATOM 23 C4 A B2490 52.034 139.562 102.274 1.00 32.58 C
ATOM 24 P U B2491 47.023 143.192 99.151 1.00 34.82 P
ATOM 25 OP1 U B2491 47.583 143.941 97.999 1.00 34.40 O
ATOM 26 OP2 U B2491 46.292 143.916 100.209 1.00 31.59 O
ATOM 27 O5' U B2491 46.115 141.997 98.611 1.00 34.55 O
TER
ATOM 2 P A A2041 52.634 127.665 104.978 1.00 29.20 P
ATOM 3 OP1 A A2041 52.987 126.248 104.738 1.00 29.71 O
ATOM 4 OP2 A A2041 53.619 128.723 104.673 1.00 29.30 O
ATOM 5 O5' A A2041 51.299 127.970 104.175 1.00 27.65 O
ATOM 6 C5' A A2041 50.160 127.118 104.293 1.00 26.67 C
ATOM 7 C4' A A2041 49.021 127.652 103.460 1.00 27.73 C
ATOM 8 O4' A A2041 48.736 129.009 103.871 1.00 28.13 O
ATOM 9 C3' A A2041 49.229 127.752 101.957 1.00 27.31 C
ATOM 10 O3' A A2041 48.941 126.496 101.346 1.00 27.37 O
ATOM 11 C2' A A2041 48.198 128.811 101.566 1.00 27.51 C
ATOM 12 O2' A A2041 46.894 128.265 101.510 1.00 29.01 O
ATOM 13 C1' A A2041 48.206 129.731 102.782 1.00 27.28 C
ATOM 14 N9 A A2041 48.992 130.945 102.579 1.00 27.68 N
ATOM 15 C8 A A2041 50.275 131.203 102.970 1.00 28.53 C
ATOM 16 N7 A A2041 50.709 132.392 102.614 1.00 29.24 N
ATOM 17 C5 A A2041 49.637 132.951 101.943 1.00 29.09 C
ATOM 18 C6 A A2041 49.465 134.181 101.301 1.00 28.84 C
ATOM 19 N6 A A2041 50.424 135.101 101.198 1.00 27.58 N
ATOM 20 N1 A A2041 48.266 134.432 100.742 1.00 28.90 N
ATOM 21 C2 A A2041 47.324 133.496 100.805 1.00 27.76 C
ATOM 22 N3 A A2041 47.367 132.298 101.362 1.00 29.06 N
ATOM 23 C4 A A2041 48.567 132.078 101.923 1.00 28.27 C
ATOM 24 P A A2042 49.678 126.069 99.982 1.00 28.14 P
ATOM 25 OP1 A A2042 49.689 127.171 98.983 1.00 27.84 O
ATOM 26 OP2 A A2042 49.064 124.779 99.631 1.00 26.79 O
ATOM 27 O5' A A2042 51.169 125.759 100.428 1.00 25.68 O
TER
ATOM 1 O3' U B2489 53.305 145.739 98.014 1.00 30.55 O
ATOM 2 P A B2490 52.527 145.091 99.218 1.00 31.75 P
ATOM 3 OP1 A B2490 51.683 146.134 99.856 1.00 32.93 O
ATOM 4 OP2 A B2490 53.495 144.346 100.028 1.00 30.72 O
ATOM 5 O5' A B2490 51.573 144.103 98.426 1.00 33.12 O
ATOM 6 C5' A B2490 51.689 142.703 98.532 1.00 31.93 C
ATOM 7 C4' A B2490 50.337 142.126 98.813 1.00 33.23 C
ATOM 8 O4' A B2490 50.534 140.849 99.442 1.00 35.29 O
ATOM 9 C3' A B2490 49.537 142.901 99.845 1.00 34.89 C
ATOM 10 O3' A B2490 48.218 142.384 99.844 1.00 34.81 O
ATOM 11 C2' A B2490 50.216 142.485 101.142 1.00 35.90 C
ATOM 12 O2' A B2490 49.341 142.625 102.242 1.00 36.25 O
ATOM 13 C1' A B2490 50.513 141.005 100.857 1.00 35.24 C
ATOM 14 N9 A B2490 51.815 140.563 101.368 1.00 33.99 N
ATOM 15 C8 A B2490 53.055 141.065 101.064 1.00 32.61 C
ATOM 16 N7 A B2490 54.027 140.499 101.719 1.00 32.17 N
ATOM 17 C5 A B2490 53.391 139.551 102.502 1.00 32.53 C
ATOM 18 C6 A B2490 53.870 138.630 103.451 1.00 32.64 C
ATOM 19 N6 A B2490 55.150 138.540 103.818 1.00 33.24 N
ATOM 20 N1 A B2490 52.972 137.805 104.033 1.00 31.97 N
ATOM 21 C2 A B2490 51.684 137.926 103.692 1.00 31.29 C
ATOM 22 N3 A B2490 51.116 138.770 102.838 1.00 32.58 N
ATOM 23 C4 A B2490 52.034 139.562 102.274 1.00 32.58 C
ATOM 24 P U B2491 47.023 143.192 99.151 1.00 34.82 P
ATOM 25 OP1 U B2491 47.583 143.941 97.999 1.00 34.40 O
ATOM 26 OP2 U B2491 46.292 143.916 100.209 1.00 31.59 O
ATOM 27 O5' U B2491 46.115 141.997 98.611 1.00 34.55 O
TER
Atoms:
OP1: (52.987,126.248,104.738)
OP2: (53.619,128.723,104.673)
C3': (49.229,127.752,101.957)
C1': (48.206,129.731,102.782)
C5': (50.160,127.118,104.293)
O4': (48.736,129.009,103.871)
C8: (50.275,131.203,102.970)
O2': (46.894,128.265,101.510)
C6: (49.465,134.181,101.301)
C5: (49.637,132.951,101.943)
C4: (48.567,132.078,101.923)
P: (52.634,127.665,104.978)
C4': (49.021,127.652,103.460)
C2': (48.198,128.811,101.566)
C2: (47.324,133.496,100.805)
N1: (48.266,134.432,100.742)
N3: (47.367,132.298,101.362)
N6: (50.424,135.101,101.198)
N7: (50.709,132.392,102.614)
N9: (48.992,130.945,102.579)
O5': (51.299,127.970,104.175)
O3': (48.941,126.496,101.346)
OP2: (53.619,128.723,104.673)
C3': (49.229,127.752,101.957)
C1': (48.206,129.731,102.782)
C5': (50.160,127.118,104.293)
O4': (48.736,129.009,103.871)
C8: (50.275,131.203,102.970)
O2': (46.894,128.265,101.510)
C6: (49.465,134.181,101.301)
C5: (49.637,132.951,101.943)
C4: (48.567,132.078,101.923)
P: (52.634,127.665,104.978)
C4': (49.021,127.652,103.460)
C2': (48.198,128.811,101.566)
C2: (47.324,133.496,100.805)
N1: (48.266,134.432,100.742)
N3: (47.367,132.298,101.362)
N6: (50.424,135.101,101.198)
N7: (50.709,132.392,102.614)
N9: (48.992,130.945,102.579)
O5': (51.299,127.970,104.175)
O3': (48.941,126.496,101.346)
OP1: (51.683,146.134,99.856)
OP2: (53.495,144.346,100.028)
C3': (49.537,142.901,99.845)
C1': (50.513,141.005,100.857)
C5': (51.689,142.703,98.532)
O4': (50.534,140.849,99.442)
C8: (53.055,141.065,101.064)
O2': (49.341,142.625,102.242)
C6: (53.870,138.630,103.451)
C5: (53.391,139.551,102.502)
C4: (52.034,139.562,102.274)
P: (52.527,145.091,99.218)
C4': (50.337,142.126,98.813)
C2': (50.216,142.485,101.142)
C2: (51.684,137.926,103.692)
N1: (52.972,137.805,104.033)
N3: (51.116,138.770,102.838)
N6: (55.150,138.540,103.818)
N7: (54.027,140.499,101.719)
N9: (51.815,140.563,101.368)
O5': (51.573,144.103,98.426)
O3': (48.218,142.384,99.844)
OP2: (53.495,144.346,100.028)
C3': (49.537,142.901,99.845)
C1': (50.513,141.005,100.857)
C5': (51.689,142.703,98.532)
O4': (50.534,140.849,99.442)
C8: (53.055,141.065,101.064)
O2': (49.341,142.625,102.242)
C6: (53.870,138.630,103.451)
C5: (53.391,139.551,102.502)
C4: (52.034,139.562,102.274)
P: (52.527,145.091,99.218)
C4': (50.337,142.126,98.813)
C2': (50.216,142.485,101.142)
C2: (51.684,137.926,103.692)
N1: (52.972,137.805,104.033)
N3: (51.116,138.770,102.838)
N6: (55.150,138.540,103.818)
N7: (54.027,140.499,101.719)
N9: (51.815,140.563,101.368)
O5': (51.573,144.103,98.426)
O3': (48.218,142.384,99.844)
Image (generated by PyMOL):